Package: miRsponge

Version: 1.10.0

Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/miRsponge_1.10.0.tar.gz && rm -rf miRsponge.buildbin-libdir && mkdir miRsponge.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=miRsponge.buildbin-libdir miRsponge_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL miRsponge_1.10.0.zip && rm miRsponge_1.10.0.tar.gz miRsponge_1.10.0.zip

StartedAt: 2019-10-15 20:02:07 -0400 (Tue, 15 Oct 2019)

EndedAt: 2019-10-15 20:03:03 -0400 (Tue, 15 Oct 2019)

EllapsedTime: 55.9 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/miRsponge_1.10.0.tar.gz && rm -rf miRsponge.buildbin-libdir && mkdir miRsponge.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=miRsponge.buildbin-libdir miRsponge_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL miRsponge_1.10.0.zip && rm miRsponge_1.10.0.tar.gz miRsponge_1.10.0.zip
###
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install for i386

* installing *source* package 'miRsponge' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c complex.c -o complex.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c registerDynamicSymbol.c -o registerDynamicSymbol.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o miRsponge.dll tmp.def complex.o registerDynamicSymbol.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/miRsponge.buildbin-libdir/00LOCK-miRsponge/00new/miRsponge/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'miRsponge'
    finding HTML links ... done
    integrateMethod                         html  
    moduleDEA                               html  
    moduleFEA                               html  
    moduleSurvival                          html  
    netModule                               html  
    querymiRTargetbinding                   html  
    spongeMethod                            html  
    spongeValidate                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'miRsponge' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c complex.c -o complex.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c registerDynamicSymbol.c -o registerDynamicSymbol.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o miRsponge.dll tmp.def complex.o registerDynamicSymbol.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/miRsponge.buildbin-libdir/miRsponge/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'miRsponge' as miRsponge_1.10.0.zip
* DONE (miRsponge)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'miRsponge' successfully unpacked and MD5 sums checked