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INSTALL report for htSeqTools on malbec2

This page was generated on 2019-10-16 12:15:05 -0400 (Wed, 16 Oct 2019).

Package 773/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
htSeqTools 1.32.0
Oscar Reina
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/htSeqTools
Branch: RELEASE_3_9
Last Commit: 8bb3e67
Last Changed Date: 2019-05-02 11:54:12 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64 [ OK ] ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64  OK  ERROR  skipped  skipped 
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: htSeqTools
Version: 1.32.0
Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL htSeqTools
StartedAt: 2019-10-15 18:57:59 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 18:58:31 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 32.0 seconds
RetCode: 0
Status:  OK 

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL htSeqTools
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* installing to library ‘/home/biocbuild/bbs-3.9-bioc/R/library’
* installing *source* package ‘htSeqTools’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Note: possible error in 'countHitsWindow(x, chrLengths = chrLengths, ': unused argument (chrLengths = chrLengths) 
Note: possible error in 'countHitsWindow(x, chrLengths = chrLengths, ': unused argument (chrLengths = chrLengths) 
Note: possible error in 'countHitsWindow(x, chrLengths = chrLengths, ': unused argument (chrLengths = chrLengths) 
Note: possible error in 'extendRanges(x, seqLen = seqLen, ': unused argument (chrLength = chrLength) 
Note: possible error in 'extendRanges(x, seqLen = seqLen, ': unused argument (chrLength = chrLength) 
Note: possible error in 'extendRanges(x, seqLen = seqLen, ': unused argument (chrLength = chrLength) 
Note: possible error in 'extendRanges(x, seqLen = seqLen, ': unused argument (chrLength = chrLength) 
Note: possible error in 'extendRanges(x, seqLen = seqLen, ': unused argument (chrLength = chrLength) 
Note: possible error in 'extendRanges(x, seqLen = seqLen, ': unused argument (chrLength = chrLength) 
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'htSeqTools' is deprecated and will be removed from
  Bioconductor version 3.10
** testing if installed package can be loaded from final location
Warning: Package 'htSeqTools' is deprecated and will be removed from
  Bioconductor version 3.10
** testing if installed package keeps a record of temporary installation path
* DONE (htSeqTools)