Package: cisPath

Version: 1.24.0

Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/cisPath_1.24.0.tar.gz && rm -rf cisPath.buildbin-libdir && mkdir cisPath.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cisPath.buildbin-libdir cisPath_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL cisPath_1.24.0.zip && rm cisPath_1.24.0.tar.gz cisPath_1.24.0.zip

StartedAt: 2019-10-15 19:19:44 -0400 (Tue, 15 Oct 2019)

EndedAt: 2019-10-15 19:20:31 -0400 (Tue, 15 Oct 2019)

EllapsedTime: 47.4 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/cisPath_1.24.0.tar.gz && rm -rf cisPath.buildbin-libdir && mkdir cisPath.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cisPath.buildbin-libdir cisPath_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL cisPath_1.24.0.zip && rm cisPath_1.24.0.tar.gz cisPath_1.24.0.zip
###
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install for i386

* installing *source* package 'cisPath' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/g++  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c cisPath.cpp -o cisPath.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o cisPath.dll tmp.def cisPath.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/cisPath.buildbin-libdir/00LOCK-cisPath/00new/cisPath/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'cisPath'
    finding HTML links ... done
    cisPath                                 html  
    combinePPI                              html  
    easyEditor                              html  
    formatPINAPPI                           html  
    formatSIFfile                           html  
    formatSTRINGPPI                         html  
    formatiRefIndex                         html  
    getMappingFile                          html  
    networkView                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'cisPath' ...
** libs
C:/Rtools/mingw_64/bin/g++  -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c cisPath.cpp -o cisPath.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o cisPath.dll tmp.def cisPath.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/cisPath.buildbin-libdir/cisPath/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'cisPath' as cisPath_1.24.0.zip
* DONE (cisPath)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'cisPath' successfully unpacked and MD5 sums checked