Karim Mezhoud
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/bioCancer |
| Branch: RELEASE_3_9 |
| Last Commit: 252f51e |
| Last Changed Date: 2019-05-02 11:54:02 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:35:56 -0400 (Wed, 16 Oct 2019).
| Package 141/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| bioCancer 1.12.0 Karim Mezhoud
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: bioCancer |
| Version: 1.12.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/bioCancer_1.12.0.tar.gz && rm -rf bioCancer.buildbin-libdir && mkdir bioCancer.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=bioCancer.buildbin-libdir bioCancer_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL bioCancer_1.12.0.zip && rm bioCancer_1.12.0.tar.gz bioCancer_1.12.0.zip |
| StartedAt: 2019-10-15 20:55:36 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 20:58:16 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 160.6 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/bioCancer_1.12.0.tar.gz && rm -rf bioCancer.buildbin-libdir && mkdir bioCancer.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=bioCancer.buildbin-libdir bioCancer_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL bioCancer_1.12.0.zip && rm bioCancer_1.12.0.tar.gz bioCancer_1.12.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 6096k 100 6096k 0 0 53.7M 0 --:--:-- --:--:-- --:--:-- 57.8M
install for i386
* installing *source* package 'bioCancer' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'bioCancer'
finding HTML links ... done
Edges_Diseases_obj html
Mutation_obj html
Node_Diseases_obj html
Node_df_FreqIn html
Node_obj_CNA_ProfData html
Node_obj_FreqIn html
Node_obj_Met_ProfData html
Node_obj_mRNA_Classifier html
Studies_obj html
UnifyRowNames html
attriColorGene html
attriColorValue html
attriColorVector html
attriShape2Gene html
attriShape2Node html
bioCancer html
checkDimensions html
coffeewheel html
coffeewheelOutput html
displayTable html
epiGenomics html
findPhantom html
getFreqMutData html
getGenesClassification html
getListProfData html
getList_Cases html
getList_GenProfs html
getMegaProfData html
getSequensed_SampleSize html
grepRef html
metabologram html
metabologramOutput html
reStrColorGene html
reStrDimension html
reStrDisease html
renderCoffeewheel html
renderMetabologram html
returnTextAreaInput html
switchButton html
user_CNA html
user_MetHM27 html
user_MetHM450 html
user_Mut html
user_mRNA html
whichGeneList html
widgetThumbnail html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'bioCancer' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'bioCancer' as bioCancer_1.12.0.zip
* DONE (bioCancer)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'bioCancer' successfully unpacked and MD5 sums checked