Mike Jiang
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/RProtoBufLib |
| Branch: RELEASE_3_9 |
| Last Commit: 899b78e |
| Last Changed Date: 2019-05-02 11:54:07 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 13:00:26 -0400 (Wed, 16 Oct 2019).
| Package 1412/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| RProtoBufLib 1.6.0 Mike Jiang
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | [ WARNINGS ] | OK | |
| Package: RProtoBufLib |
| Version: 1.6.0 |
| Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --install=check:RProtoBufLib.install-out.txt --library=/Library/Frameworks/R.framework/Versions/Current/Resources/library --no-vignettes --timings RProtoBufLib_1.6.0.tar.gz |
| StartedAt: 2019-10-16 06:24:35 -0400 (Wed, 16 Oct 2019) |
| EndedAt: 2019-10-16 06:25:01 -0400 (Wed, 16 Oct 2019) |
| EllapsedTime: 25.6 seconds |
| RetCode: 0 |
| Status: WARNINGS |
| CheckDir: RProtoBufLib.Rcheck |
| Warnings: 1 |
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### Running command:
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### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --install=check:RProtoBufLib.install-out.txt --library=/Library/Frameworks/R.framework/Versions/Current/Resources/library --no-vignettes --timings RProtoBufLib_1.6.0.tar.gz
###
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* using log directory ‘/Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib.Rcheck’
* using R version 3.6.1 (2019-07-05)
* using platform: x86_64-apple-darwin15.6.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘RProtoBufLib/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘RProtoBufLib’ version ‘1.6.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘RProtoBufLib’ can be installed ... OK
* checking installed package size ... NOTE
installed size is 19.7Mb
sub-directories of 1Mb or more:
include 1.2Mb
lib 18.3Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
License components which are templates and need '+ file LICENSE':
BSD_3_clause
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in shell scripts ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... WARNING
Files in the 'vignettes' directory but no files in 'inst/doc':
‘UsingRProtoBufLib.Rmd’
Package has no Sweave vignette sources and no VignetteBuilder field.
* checking examples ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 WARNING, 3 NOTEs
See
‘/Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib.Rcheck/00check.log’
for details.
RProtoBufLib.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL RProtoBufLib ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library’ * installing *source* package ‘RProtoBufLib’ ... ** using staged installation checking for gcc... clang checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether clang accepts -g... yes checking for clang option to accept ISO C89... none needed checking whether we are using the GNU C++ compiler... yes checking whether clang++ -std=gnu++11 accepts -g... yes untarring protobuf ... building protobuf... checking whether to enable maintainer-specific portions of Makefiles... yes checking build system type... x86_64-apple-darwin15.6.0 checking host system type... x86_64-apple-darwin15.6.0 checking target system type... x86_64-apple-darwin15.6.0 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... ./install-sh -c -d checking for gawk... no checking for mawk... no checking for nawk... no checking for awk... awk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gcc... clang checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether clang accepts -g... yes checking for clang option to accept ISO C89... none needed checking whether clang understands -c and -o together... rm: conftest.dSYM: is a directory yes checking for style of include used by make... GNU checking dependency style of clang... gcc3 checking whether we are using the GNU C++ compiler... yes checking whether clang++ -std=gnu++11 accepts -g... yes checking dependency style of clang++ -std=gnu++11... gcc3 checking how to run the C++ preprocessor... clang++ -std=gnu++11 -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... rm: conftest.dSYM: is a directory rm: conftest.dSYM: is a directory yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking minix/config.h usability... no checking minix/config.h presence... no checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking C++ compiler flags...... use user-supplied: -Wall -g -O2 checking whether __SUNPRO_CC is declared... no checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for fgrep... /usr/bin/grep -F checking for ld used by clang... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... no checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 196608 checking how to convert x86_64-apple-darwin15.6.0 file names to x86_64-apple-darwin15.6.0 format... func_convert_file_noop checking how to convert x86_64-apple-darwin15.6.0 file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... no checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... no checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from clang object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dsymutil... dsymutil checking for nmedit... nmedit checking for lipo... lipo checking for otool... otool checking for otool64... no checking for -single_module linker flag... yes checking for -exported_symbols_list linker flag... yes checking for -force_load linker flag... yes checking for dlfcn.h... yes checking for objdir... .libs checking if clang supports -fno-rtti -fno-exceptions... yes checking for clang option to produce PIC... -fno-common -DPIC checking if clang PIC flag -fno-common -DPIC works... yes checking if clang static flag -static works... no checking if clang supports -c -o file.o... yes checking if clang supports -c -o file.o... (cached) yes checking whether the clang linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin15.6.0 dyld checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking how to run the C++ preprocessor... clang++ -std=gnu++11 -E checking for ld used by clang++ -std=gnu++11... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... no checking whether the clang++ -std=gnu++11 linker (/usr/bin/ld) supports shared libraries... yes checking for clang++ -std=gnu++11 option to produce PIC... -fno-common -DPIC checking if clang++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes checking if clang++ -std=gnu++11 static flag -static works... no checking if clang++ -std=gnu++11 supports -c -o file.o... yes checking if clang++ -std=gnu++11 supports -c -o file.o... (cached) yes checking whether the clang++ -std=gnu++11 linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin15.6.0 dyld checking how to hardcode library paths into programs... immediate checking for ANSI C header files... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking for inttypes.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking for stdlib.h... (cached) yes checking for unistd.h... (cached) yes checking for working memcmp... yes checking for working strtod... yes checking for ftruncate... yes checking for memset... yes checking for mkdir... yes checking for strchr... yes checking for strerror... yes checking for strtol... yes checking zlib version... ok (1.2.0.4 or later) checking for library containing zlibVersion... -lz checking for the pthreads library -lpthreads... no checking whether pthreads work without any flags... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking if more special flags are required for pthreads... -D_THREAD_SAFE checking whether to check for GCC pthread/shared inconsistencies... no checking whether what we have so far is sufficient with -nostdlib... no checking whether -lpthread saves the day... no configure: WARNING: Impossible to determine how to use pthreads with shared libraries and -nostdlib checking the location of hash_map...checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating protobuf.pc config.status: creating protobuf-lite.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands Making install in . make[2]: Nothing to be done for `install-exec-am'. make[2]: Nothing to be done for `install-data-am'. Making install in src depbase=`echo google/protobuf/stubs/atomicops_internals_x86_gcc.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/stubs/atomicops_internals_x86_gcc.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/stubs/atomicops_internals_x86_gcc.lo google/protobuf/stubs/atomicops_internals_x86_gcc.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/stubs/atomicops_internals_x86_gcc.lo -MD -MP -MF google/protobuf/stubs/.deps/atomicops_internals_x86_gcc.Tpo -c google/protobuf/stubs/atomicops_internals_x86_gcc.cc -fno-common -DPIC -o google/protobuf/stubs/atomicops_internals_x86_gcc.o depbase=`echo google/protobuf/stubs/atomicops_internals_x86_msvc.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/stubs/atomicops_internals_x86_msvc.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/stubs/atomicops_internals_x86_msvc.lo google/protobuf/stubs/atomicops_internals_x86_msvc.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/stubs/atomicops_internals_x86_msvc.lo -MD -MP -MF google/protobuf/stubs/.deps/atomicops_internals_x86_msvc.Tpo -c google/protobuf/stubs/atomicops_internals_x86_msvc.cc -fno-common -DPIC -o google/protobuf/stubs/atomicops_internals_x86_msvc.o depbase=`echo google/protobuf/stubs/common.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/stubs/common.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/stubs/common.lo google/protobuf/stubs/common.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/stubs/common.lo -MD -MP -MF google/protobuf/stubs/.deps/common.Tpo -c google/protobuf/stubs/common.cc -fno-common -DPIC -o google/protobuf/stubs/common.o depbase=`echo google/protobuf/stubs/once.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/stubs/once.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/stubs/once.lo google/protobuf/stubs/once.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/stubs/once.lo -MD -MP -MF google/protobuf/stubs/.deps/once.Tpo -c google/protobuf/stubs/once.cc -fno-common -DPIC -o google/protobuf/stubs/once.o depbase=`echo google/protobuf/stubs/stringprintf.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/stubs/stringprintf.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/stubs/stringprintf.lo google/protobuf/stubs/stringprintf.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/stubs/stringprintf.lo -MD -MP -MF google/protobuf/stubs/.deps/stringprintf.Tpo -c google/protobuf/stubs/stringprintf.cc -fno-common -DPIC -o google/protobuf/stubs/stringprintf.o google/protobuf/stubs/stringprintf.cc:164:59: warning: unused typedef 'arg_count_mismatch' [-Wunused-local-typedef] GOOGLE_COMPILE_ASSERT(kStringPrintfVectorMaxArgs == 32, arg_count_mismatch); ^ 1 warning generated. depbase=`echo google/protobuf/extension_set.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/extension_set.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/extension_set.lo google/protobuf/extension_set.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/extension_set.lo -MD -MP -MF google/protobuf/.deps/extension_set.Tpo -c google/protobuf/extension_set.cc -fno-common -DPIC -o google/protobuf/extension_set.o In file included from google/protobuf/extension_set.cc:43: ./google/protobuf/stubs/map_util.h:356:43: warning: unused typedef 'value_type' [-Wunused-local-typedef] typedef typename Collection::value_type value_type; ^ ./google/protobuf/stubs/map_util.h:367:43: warning: unused typedef 'value_type' [-Wunused-local-typedef] typedef typename Collection::value_type value_type; ^ 2 warnings generated. depbase=`echo google/protobuf/generated_message_util.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall 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$depbase.Tpo -c -o google/protobuf/message_lite.lo google/protobuf/message_lite.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/message_lite.lo -MD -MP -MF google/protobuf/.deps/message_lite.Tpo -c google/protobuf/message_lite.cc -fno-common -DPIC -o google/protobuf/message_lite.o depbase=`echo google/protobuf/repeated_field.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/repeated_field.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/repeated_field.lo google/protobuf/repeated_field.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/repeated_field.lo -MD -MP -MF google/protobuf/.deps/repeated_field.Tpo -c google/protobuf/repeated_field.cc -fno-common -DPIC -o google/protobuf/repeated_field.o depbase=`echo google/protobuf/wire_format_lite.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/wire_format_lite.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/wire_format_lite.lo google/protobuf/wire_format_lite.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/wire_format_lite.lo -MD -MP -MF google/protobuf/.deps/wire_format_lite.Tpo -c google/protobuf/wire_format_lite.cc -fno-common -DPIC -o google/protobuf/wire_format_lite.o depbase=`echo google/protobuf/io/coded_stream.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/io/coded_stream.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/io/coded_stream.lo google/protobuf/io/coded_stream.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/io/coded_stream.lo -MD -MP -MF google/protobuf/io/.deps/coded_stream.Tpo -c google/protobuf/io/coded_stream.cc -fno-common -DPIC -o google/protobuf/io/coded_stream.o depbase=`echo google/protobuf/io/zero_copy_stream.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/io/zero_copy_stream.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/io/zero_copy_stream.lo google/protobuf/io/zero_copy_stream.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/io/zero_copy_stream.lo -MD -MP -MF google/protobuf/io/.deps/zero_copy_stream.Tpo -c google/protobuf/io/zero_copy_stream.cc -fno-common -DPIC -o google/protobuf/io/zero_copy_stream.o depbase=`echo google/protobuf/io/zero_copy_stream_impl_lite.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/io/zero_copy_stream_impl_lite.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/io/zero_copy_stream_impl_lite.lo google/protobuf/io/zero_copy_stream_impl_lite.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/io/zero_copy_stream_impl_lite.lo -MD -MP -MF google/protobuf/io/.deps/zero_copy_stream_impl_lite.Tpo -c google/protobuf/io/zero_copy_stream_impl_lite.cc -fno-common -DPIC -o google/protobuf/io/zero_copy_stream_impl_lite.o depbase=`echo google/protobuf/stubs/strutil.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/stubs/strutil.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/stubs/strutil.lo google/protobuf/stubs/strutil.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/stubs/strutil.lo -MD -MP -MF google/protobuf/stubs/.deps/strutil.Tpo -c google/protobuf/stubs/strutil.cc -fno-common -DPIC -o google/protobuf/stubs/strutil.o google/protobuf/stubs/strutil.cc:846:21: warning: unused function 'PlaceNum' [-Wunused-function] static inline char* PlaceNum(char* p, int num, char prev_sep) { ^ In file included from google/protobuf/stubs/strutil.cc:33: ./google/protobuf/stubs/strutil.h:341:25: warning: unused typedef 'sizeof_int64_is_not_sizeof_long_long' [-Wunused-local-typedef] sizeof_int64_is_not_sizeof_long_long); ^ ./google/protobuf/stubs/strutil.h:347:25: warning: unused typedef 'sizeof_uint64_is_not_sizeof_long_long' [-Wunused-local-typedef] sizeof_uint64_is_not_sizeof_long_long); ^ google/protobuf/stubs/strutil.cc:1172:39: warning: unused typedef 'DBL_DIG_is_too_big' [-Wunused-local-typedef] GOOGLE_COMPILE_ASSERT(DBL_DIG < 20, DBL_DIG_is_too_big); ^ google/protobuf/stubs/strutil.cc:1227:39: warning: unused typedef 'FLT_DIG_is_too_big' [-Wunused-local-typedef] GOOGLE_COMPILE_ASSERT(FLT_DIG < 10, FLT_DIG_is_too_big); ^ 5 warnings generated. depbase=`echo google/protobuf/stubs/substitute.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/stubs/substitute.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/stubs/substitute.lo google/protobuf/stubs/substitute.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/stubs/substitute.lo -MD -MP -MF google/protobuf/stubs/.deps/substitute.Tpo -c google/protobuf/stubs/substitute.cc -fno-common -DPIC -o google/protobuf/stubs/substitute.o In file included from google/protobuf/stubs/substitute.cc:33: In file included from ./google/protobuf/stubs/substitute.h:36: ./google/protobuf/stubs/strutil.h:341:25: warning: unused typedef 'sizeof_int64_is_not_sizeof_long_long' [-Wunused-local-typedef] sizeof_int64_is_not_sizeof_long_long); ^ ./google/protobuf/stubs/strutil.h:347:25: warning: unused typedef 'sizeof_uint64_is_not_sizeof_long_long' [-Wunused-local-typedef] sizeof_uint64_is_not_sizeof_long_long); ^ 2 warnings generated. depbase=`echo google/protobuf/stubs/structurally_valid.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/stubs/structurally_valid.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/stubs/structurally_valid.lo google/protobuf/stubs/structurally_valid.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/stubs/structurally_valid.lo -MD -MP -MF google/protobuf/stubs/.deps/structurally_valid.Tpo -c google/protobuf/stubs/structurally_valid.cc -fno-common -DPIC -o google/protobuf/stubs/structurally_valid.o depbase=`echo google/protobuf/descriptor.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/descriptor.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/descriptor.lo google/protobuf/descriptor.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/descriptor.lo -MD -MP -MF google/protobuf/.deps/descriptor.Tpo -c google/protobuf/descriptor.cc -fno-common -DPIC -o google/protobuf/descriptor.o In file included from google/protobuf/descriptor.cc:57: ./google/protobuf/stubs/strutil.h:341:25: warning: unused typedef 'sizeof_int64_is_not_sizeof_long_long' [-Wunused-local-typedef] sizeof_int64_is_not_sizeof_long_long); ^ ./google/protobuf/stubs/strutil.h:347:25: warning: unused typedef 'sizeof_uint64_is_not_sizeof_long_long' [-Wunused-local-typedef] sizeof_uint64_is_not_sizeof_long_long); ^ In file included from google/protobuf/descriptor.cc:59: ./google/protobuf/stubs/map_util.h:356:43: warning: unused typedef 'value_type' [-Wunused-local-typedef] typedef typename Collection::value_type value_type; ^ ./google/protobuf/stubs/map_util.h:367:43: warning: unused typedef 'value_type' [-Wunused-local-typedef] typedef typename Collection::value_type value_type; ^ 4 warnings generated. depbase=`echo google/protobuf/descriptor.pb.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/descriptor.pb.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/descriptor.pb.lo google/protobuf/descriptor.pb.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/descriptor.pb.lo -MD -MP -MF google/protobuf/.deps/descriptor.pb.Tpo -c google/protobuf/descriptor.pb.cc -fno-common -DPIC -o google/protobuf/descriptor.pb.o depbase=`echo google/protobuf/descriptor_database.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/descriptor_database.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/descriptor_database.lo google/protobuf/descriptor_database.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/descriptor_database.lo -MD -MP -MF google/protobuf/.deps/descriptor_database.Tpo -c google/protobuf/descriptor_database.cc -fno-common -DPIC -o google/protobuf/descriptor_database.o In file included from google/protobuf/descriptor_database.cc:41: ./google/protobuf/stubs/strutil.h:341:25: warning: unused typedef 'sizeof_int64_is_not_sizeof_long_long' [-Wunused-local-typedef] sizeof_int64_is_not_sizeof_long_long); ^ ./google/protobuf/stubs/strutil.h:347:25: warning: unused typedef 'sizeof_uint64_is_not_sizeof_long_long' [-Wunused-local-typedef] sizeof_uint64_is_not_sizeof_long_long); ^ In file included from google/protobuf/descriptor_database.cc:43: ./google/protobuf/stubs/map_util.h:356:43: warning: unused typedef 'value_type' [-Wunused-local-typedef] typedef typename Collection::value_type value_type; ^ ./google/protobuf/stubs/map_util.h:367:43: warning: unused typedef 'value_type' [-Wunused-local-typedef] typedef typename Collection::value_type value_type; ^ 4 warnings generated. depbase=`echo google/protobuf/dynamic_message.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/dynamic_message.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/dynamic_message.lo google/protobuf/dynamic_message.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/dynamic_message.lo -MD -MP -MF google/protobuf/.deps/dynamic_message.Tpo -c google/protobuf/dynamic_message.cc -fno-common -DPIC -o google/protobuf/dynamic_message.o depbase=`echo google/protobuf/extension_set_heavy.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/extension_set_heavy.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/extension_set_heavy.lo google/protobuf/extension_set_heavy.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/extension_set_heavy.lo -MD -MP -MF google/protobuf/.deps/extension_set_heavy.Tpo -c google/protobuf/extension_set_heavy.cc -fno-common -DPIC -o google/protobuf/extension_set_heavy.o depbase=`echo google/protobuf/generated_message_reflection.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/generated_message_reflection.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/generated_message_reflection.lo google/protobuf/generated_message_reflection.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/generated_message_reflection.lo -MD -MP -MF google/protobuf/.deps/generated_message_reflection.Tpo -c google/protobuf/generated_message_reflection.cc -fno-common -DPIC -o google/protobuf/generated_message_reflection.o depbase=`echo google/protobuf/message.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/message.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/message.lo google/protobuf/message.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/message.lo -MD -MP -MF google/protobuf/.deps/message.Tpo -c google/protobuf/message.cc -fno-common -DPIC -o google/protobuf/message.o In file included from google/protobuf/message.cc:50: ./google/protobuf/stubs/strutil.h:341:25: warning: unused typedef 'sizeof_int64_is_not_sizeof_long_long' [-Wunused-local-typedef] sizeof_int64_is_not_sizeof_long_long); ^ ./google/protobuf/stubs/strutil.h:347:25: warning: unused typedef 'sizeof_uint64_is_not_sizeof_long_long' [-Wunused-local-typedef] sizeof_uint64_is_not_sizeof_long_long); ^ In file included from google/protobuf/message.cc:51: ./google/protobuf/stubs/map_util.h:356:43: warning: unused typedef 'value_type' [-Wunused-local-typedef] typedef typename Collection::value_type value_type; ^ ./google/protobuf/stubs/map_util.h:367:43: warning: unused typedef 'value_type' [-Wunused-local-typedef] typedef typename Collection::value_type value_type; ^ 4 warnings generated. depbase=`echo google/protobuf/reflection_ops.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/reflection_ops.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/reflection_ops.lo google/protobuf/reflection_ops.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/reflection_ops.lo -MD -MP -MF google/protobuf/.deps/reflection_ops.Tpo -c google/protobuf/reflection_ops.cc -fno-common -DPIC -o google/protobuf/reflection_ops.o In file included from google/protobuf/reflection_ops.cc:42: ./google/protobuf/stubs/strutil.h:341:25: warning: unused typedef 'sizeof_int64_is_not_sizeof_long_long' [-Wunused-local-typedef] sizeof_int64_is_not_sizeof_long_long); ^ ./google/protobuf/stubs/strutil.h:347:25: warning: unused typedef 'sizeof_uint64_is_not_sizeof_long_long' [-Wunused-local-typedef] sizeof_uint64_is_not_sizeof_long_long); ^ 2 warnings generated. depbase=`echo google/protobuf/service.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/service.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/service.lo google/protobuf/service.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/service.lo -MD -MP -MF google/protobuf/.deps/service.Tpo -c google/protobuf/service.cc -fno-common -DPIC -o google/protobuf/service.o depbase=`echo google/protobuf/text_format.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/text_format.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/text_format.lo google/protobuf/text_format.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/text_format.lo -MD -MP -MF google/protobuf/.deps/text_format.Tpo -c google/protobuf/text_format.cc -fno-common -DPIC -o google/protobuf/text_format.o In file included from google/protobuf/text_format.cc:53: ./google/protobuf/stubs/strutil.h:341:25: warning: unused typedef 'sizeof_int64_is_not_sizeof_long_long' [-Wunused-local-typedef] sizeof_int64_is_not_sizeof_long_long); ^ ./google/protobuf/stubs/strutil.h:347:25: warning: unused typedef 'sizeof_uint64_is_not_sizeof_long_long' [-Wunused-local-typedef] sizeof_uint64_is_not_sizeof_long_long); ^ In file included from google/protobuf/text_format.cc:54: ./google/protobuf/stubs/map_util.h:356:43: warning: unused typedef 'value_type' [-Wunused-local-typedef] typedef typename Collection::value_type value_type; ^ ./google/protobuf/stubs/map_util.h:367:43: warning: unused typedef 'value_type' [-Wunused-local-typedef] typedef typename Collection::value_type value_type; ^ 4 warnings generated. depbase=`echo google/protobuf/unknown_field_set.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/unknown_field_set.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/unknown_field_set.lo google/protobuf/unknown_field_set.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/unknown_field_set.lo -MD -MP -MF google/protobuf/.deps/unknown_field_set.Tpo -c google/protobuf/unknown_field_set.cc -fno-common -DPIC -o google/protobuf/unknown_field_set.o depbase=`echo google/protobuf/wire_format.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/wire_format.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/wire_format.lo google/protobuf/wire_format.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/wire_format.lo -MD -MP -MF google/protobuf/.deps/wire_format.Tpo -c google/protobuf/wire_format.cc -fno-common -DPIC -o google/protobuf/wire_format.o google/protobuf/wire_format.cc:60:12: warning: unused function 'GetEnumNumber' [-Wunused-function] inline int GetEnumNumber(const EnumValueDescriptor* descriptor) { ^ 1 warning generated. depbase=`echo google/protobuf/io/gzip_stream.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/io/gzip_stream.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/io/gzip_stream.lo google/protobuf/io/gzip_stream.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/io/gzip_stream.lo -MD -MP -MF google/protobuf/io/.deps/gzip_stream.Tpo -c google/protobuf/io/gzip_stream.cc -fno-common -DPIC -o google/protobuf/io/gzip_stream.o depbase=`echo google/protobuf/io/printer.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/io/printer.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/io/printer.lo google/protobuf/io/printer.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/io/printer.lo -MD -MP -MF google/protobuf/io/.deps/printer.Tpo -c google/protobuf/io/printer.cc -fno-common -DPIC -o google/protobuf/io/printer.o depbase=`echo google/protobuf/io/strtod.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/io/strtod.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/io/strtod.lo google/protobuf/io/strtod.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/io/strtod.lo -MD -MP -MF google/protobuf/io/.deps/strtod.Tpo -c google/protobuf/io/strtod.cc -fno-common -DPIC -o google/protobuf/io/strtod.o depbase=`echo google/protobuf/io/tokenizer.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/io/tokenizer.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/io/tokenizer.lo google/protobuf/io/tokenizer.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/io/tokenizer.lo -MD -MP -MF google/protobuf/io/.deps/tokenizer.Tpo -c google/protobuf/io/tokenizer.cc -fno-common -DPIC -o google/protobuf/io/tokenizer.o In file included from google/protobuf/io/tokenizer.cc:96: ./google/protobuf/stubs/strutil.h:341:25: warning: unused typedef 'sizeof_int64_is_not_sizeof_long_long' [-Wunused-local-typedef] sizeof_int64_is_not_sizeof_long_long); ^ ./google/protobuf/stubs/strutil.h:347:25: warning: unused typedef 'sizeof_uint64_is_not_sizeof_long_long' [-Wunused-local-typedef] sizeof_uint64_is_not_sizeof_long_long); ^ 2 warnings generated. depbase=`echo google/protobuf/io/zero_copy_stream_impl.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../libtool --tag=CXX --mode=compile clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/io/zero_copy_stream_impl.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/io/zero_copy_stream_impl.lo google/protobuf/io/zero_copy_stream_impl.cc &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: clang++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I.. -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -MT google/protobuf/io/zero_copy_stream_impl.lo -MD -MP -MF google/protobuf/io/.deps/zero_copy_stream_impl.Tpo -c google/protobuf/io/zero_copy_stream_impl.cc -fno-common -DPIC -o google/protobuf/io/zero_copy_stream_impl.o /bin/sh ../libtool --tag=CXX --mode=link clang++ -std=gnu++11 -D_THREAD_SAFE -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -Wall -g -O2 -version-info 9:0:0 -export-dynamic -no-undefined -o libprotobuf.la -rpath /Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/lib google/protobuf/stubs/atomicops_internals_x86_gcc.lo google/protobuf/stubs/atomicops_internals_x86_msvc.lo google/protobuf/stubs/common.lo google/protobuf/stubs/once.lo google/protobuf/stubs/stringprintf.lo google/protobuf/extension_set.lo google/protobuf/generated_message_util.lo google/protobuf/message_lite.lo google/protobuf/repeated_field.lo google/protobuf/wire_format_lite.lo google/protobuf/io/coded_stream.lo google/protobuf/io/zero_copy_stream.lo google/protobuf/io/zero_copy_stream_impl_lite.lo google/protobuf/stubs/strutil.lo google/protobuf/stubs/substitute.lo google/protobuf/stubs/structurally_valid.lo google/protobuf/descriptor.lo google/protobuf/descriptor.pb.lo google/protobuf/descriptor_database.lo google/protobuf/dynamic_message.lo google/protobuf/extension_set_heavy.lo google/protobuf/generated_message_reflection.lo google/protobuf/message.lo google/protobuf/reflection_ops.lo google/protobuf/service.lo google/protobuf/text_format.lo google/protobuf/unknown_field_set.lo google/protobuf/wire_format.lo google/protobuf/io/gzip_stream.lo google/protobuf/io/printer.lo google/protobuf/io/strtod.lo google/protobuf/io/tokenizer.lo google/protobuf/io/zero_copy_stream_impl.lo -lz libtool: link: ar cru .libs/libprotobuf.a google/protobuf/stubs/atomicops_internals_x86_gcc.o google/protobuf/stubs/atomicops_internals_x86_msvc.o google/protobuf/stubs/common.o google/protobuf/stubs/once.o google/protobuf/stubs/stringprintf.o google/protobuf/extension_set.o google/protobuf/generated_message_util.o google/protobuf/message_lite.o google/protobuf/repeated_field.o google/protobuf/wire_format_lite.o google/protobuf/io/coded_stream.o google/protobuf/io/zero_copy_stream.o google/protobuf/io/zero_copy_stream_impl_lite.o google/protobuf/stubs/strutil.o google/protobuf/stubs/substitute.o google/protobuf/stubs/structurally_valid.o google/protobuf/descriptor.o google/protobuf/descriptor.pb.o google/protobuf/descriptor_database.o google/protobuf/dynamic_message.o google/protobuf/extension_set_heavy.o google/protobuf/generated_message_reflection.o google/protobuf/message.o google/protobuf/reflection_ops.o google/protobuf/service.o google/protobuf/text_format.o google/protobuf/unknown_field_set.o google/protobuf/wire_format.o google/protobuf/io/gzip_stream.o google/protobuf/io/printer.o google/protobuf/io/strtod.o google/protobuf/io/tokenizer.o google/protobuf/io/zero_copy_stream_impl.o /Library/Developer/CommandLineTools/usr/bin/ranlib: file: .libs/libprotobuf.a(atomicops_internals_x86_gcc.o) has no symbols /Library/Developer/CommandLineTools/usr/bin/ranlib: file: .libs/libprotobuf.a(atomicops_internals_x86_msvc.o) has no symbols libtool: link: ranlib .libs/libprotobuf.a /Library/Developer/CommandLineTools/usr/bin/ranlib: file: .libs/libprotobuf.a(atomicops_internals_x86_gcc.o) has no symbols /Library/Developer/CommandLineTools/usr/bin/ranlib: file: .libs/libprotobuf.a(atomicops_internals_x86_msvc.o) has no symbols libtool: link: ( cd ".libs" && rm -f "libprotobuf.la" && ln -s "../libprotobuf.la" "libprotobuf.la" ) .././install-sh -c -d '/Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/lib' /bin/sh ../libtool --mode=install /usr/bin/install -c libprotobuf.la '/Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/lib' libtool: install: /usr/bin/install -c .libs/libprotobuf.lai /Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/lib/libprotobuf.la libtool: install: /usr/bin/install -c .libs/libprotobuf.a /Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/lib/libprotobuf.a libtool: install: chmod 644 /Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/lib/libprotobuf.a libtool: install: ranlib /Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/lib/libprotobuf.a /Library/Developer/CommandLineTools/usr/bin/ranlib: file: /Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/lib/libprotobuf.a(atomicops_internals_x86_gcc.o) has no symbols /Library/Developer/CommandLineTools/usr/bin/ranlib: file: /Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/lib/libprotobuf.a(atomicops_internals_x86_msvc.o) has no symbols .././install-sh -c -d '/Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/include' .././install-sh -c -d '/Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/include/google/protobuf/stubs' /usr/bin/install -c -m 644 google/protobuf/stubs/atomicops.h google/protobuf/stubs/atomicops_internals_arm_gcc.h google/protobuf/stubs/atomicops_internals_arm64_gcc.h google/protobuf/stubs/atomicops_internals_arm_qnx.h google/protobuf/stubs/atomicops_internals_atomicword_compat.h google/protobuf/stubs/atomicops_internals_generic_gcc.h google/protobuf/stubs/atomicops_internals_macosx.h google/protobuf/stubs/atomicops_internals_mips_gcc.h google/protobuf/stubs/atomicops_internals_pnacl.h google/protobuf/stubs/atomicops_internals_tsan.h google/protobuf/stubs/atomicops_internals_x86_gcc.h google/protobuf/stubs/atomicops_internals_x86_msvc.h google/protobuf/stubs/common.h google/protobuf/stubs/platform_macros.h google/protobuf/stubs/once.h google/protobuf/stubs/stl_util.h google/protobuf/stubs/template_util.h google/protobuf/stubs/type_traits.h '/Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/include/google/protobuf/stubs' .././install-sh -c -d '/Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/include/google/protobuf/io' /usr/bin/install -c -m 644 google/protobuf/io/coded_stream.h google/protobuf/io/gzip_stream.h google/protobuf/io/printer.h google/protobuf/io/strtod.h google/protobuf/io/tokenizer.h google/protobuf/io/zero_copy_stream.h google/protobuf/io/zero_copy_stream_impl.h google/protobuf/io/zero_copy_stream_impl_lite.h '/Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/include/google/protobuf/io' .././install-sh -c -d '/Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/include/google/protobuf' /usr/bin/install -c -m 644 google/protobuf/descriptor.h google/protobuf/descriptor.pb.h google/protobuf/descriptor_database.h google/protobuf/dynamic_message.h google/protobuf/extension_set.h google/protobuf/generated_enum_reflection.h google/protobuf/generated_message_util.h google/protobuf/generated_message_reflection.h google/protobuf/message.h google/protobuf/message_lite.h google/protobuf/reflection_ops.h google/protobuf/repeated_field.h google/protobuf/service.h google/protobuf/text_format.h google/protobuf/unknown_field_set.h google/protobuf/wire_format.h google/protobuf/wire_format_lite.h google/protobuf/wire_format_lite_inl.h '/Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/include/google/protobuf' configure: creating ./config.status config.status: creating src/Makevars ** libs clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include/ -I/Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/include/ -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c GatingSet_pb_lib/GatingSet.pb.cc -o GatingSet_pb_lib/GatingSet.pb.o mkdir -p "/Library/Frameworks/R.framework/Versions/3.6/Resources/library/00LOCK-RProtoBufLib/00new/RProtoBufLib/include" cp -r /Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/include/google /Library/Frameworks/R.framework/Versions/3.6/Resources/library/00LOCK-RProtoBufLib/00new/RProtoBufLib/include mkdir -p "/Library/Frameworks/R.framework/Versions/3.6/Resources/library/00LOCK-RProtoBufLib/00new/RProtoBufLib/lib/" cp /Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/lib/* /Library/Frameworks/R.framework/Versions/3.6/Resources/library/00LOCK-RProtoBufLib/00new/RProtoBufLib/lib/ cp GatingSet_pb_lib/GatingSet.pb.o /Library/Frameworks/R.framework/Versions/3.6/Resources/library/00LOCK-RProtoBufLib/00new/RProtoBufLib/lib//GatingSet.pb.o clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include/ -I/Users/biocbuild/bbs-3.9-bioc/meat/RProtoBufLib/src/pb_build/include/ -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c dummy.cpp -o dummy.o clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o RProtoBufLib.so dummy.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Library/Frameworks/R.framework/Versions/3.6/Resources/library/00LOCK-RProtoBufLib/00new/RProtoBufLib/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RProtoBufLib)
RProtoBufLib.Rcheck/RProtoBufLib-Ex.timings
| name | user | system | elapsed | |
| LdFlags | 0.018 | 0.003 | 0.022 | |