Karl Dykema
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/PGSEA |
| Branch: RELEASE_3_9 |
| Last Commit: a89e31f |
| Last Changed Date: 2019-05-02 11:53:07 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:21:11 -0400 (Wed, 16 Oct 2019).
| Package 1200/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| PGSEA 1.58.0 Karl Dykema
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | ERROR | skipped | |||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | ERROR | skipped | skipped |
| Package: PGSEA |
| Version: 1.58.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/PGSEA_1.58.0.tar.gz && rm -rf PGSEA.buildbin-libdir && mkdir PGSEA.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PGSEA.buildbin-libdir PGSEA_1.58.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL PGSEA_1.58.0.zip && rm PGSEA_1.58.0.tar.gz PGSEA_1.58.0.zip |
| StartedAt: 2019-10-15 19:08:59 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 19:09:52 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 53.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/PGSEA_1.58.0.tar.gz && rm -rf PGSEA.buildbin-libdir && mkdir PGSEA.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PGSEA.buildbin-libdir PGSEA_1.58.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL PGSEA_1.58.0.zip && rm PGSEA_1.58.0.tar.gz PGSEA_1.58.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
98 957k 98 944k 0 0 9368k 0 --:--:-- --:--:-- --:--:-- 9833k
100 957k 100 957k 0 0 9455k 0 --:--:-- --:--:-- --:--:-- 9969k
install for i386
* installing *source* package 'PGSEA' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'PGSEA'
finding HTML links ... done
GOLUBmcs html
PGSEA html
VAIgsc html
VAImcs html
aggregateExprs html
convertSmc html
editSmc html
go2smc html
kegg2smc html
nbEset html
readGmt html
readSmc html
scanSmc html
smcPlot html
writeGmt html
writeSmc html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'PGSEA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'PGSEA' as PGSEA_1.58.0.zip
* DONE (PGSEA)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'PGSEA' successfully unpacked and MD5 sums checked