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BUILD BIN report for PCpheno on celaya2

This page was generated on 2019-10-16 12:46:48 -0400 (Wed, 16 Oct 2019).

Package 1190/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
PCpheno 1.46.0
Nolwenn Le Meur
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/PCpheno
Branch: RELEASE_3_9
Last Commit: 5d76c77
Last Changed Date: 2019-05-02 11:53:09 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository

Summary

Package: PCpheno
Version: 1.46.0
Command: rm -rf PCpheno.buildbin-libdir && mkdir PCpheno.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh PCpheno_1.46.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R PCpheno.buildbin-libdir
StartedAt: 2019-10-16 09:07:16 -0400 (Wed, 16 Oct 2019)
EndedAt: 2019-10-16 09:07:49 -0400 (Wed, 16 Oct 2019)
EllapsedTime: 32.7 seconds
RetCode: 0
Status:  OK 
PackageFile: PCpheno_1.46.0.tgz
PackageFileSize: 1.133 MiB

Command output

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###
### Running command:
###
###   rm -rf PCpheno.buildbin-libdir && mkdir PCpheno.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh PCpheno_1.46.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R PCpheno.buildbin-libdir
###
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>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=PCpheno.buildbin-libdir PCpheno_1.46.0.tar.gz'
>>>>>>> 

* installing *source* package ‘PCpheno’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
No methods found in package ‘Biobase’ for request: ‘listlen’ when loading ‘RpsiXML’
No methods found in package ‘annotate’ for requests: ‘pubmed’, ‘buildPubMedAbst’ when loading ‘RpsiXML’
No methods found in package ‘BiocGenerics’ for request: ‘plot’ when loading ‘SLGI’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package ‘Biobase’ for request: ‘listlen’ when loading ‘RpsiXML’
No methods found in package ‘annotate’ for requests: ‘pubmed’, ‘buildPubMedAbst’ when loading ‘RpsiXML’
No methods found in package ‘BiocGenerics’ for request: ‘plot’ when loading ‘SLGI’
** testing if installed package can be loaded from final location
No methods found in package ‘Biobase’ for request: ‘listlen’ when loading ‘RpsiXML’
No methods found in package ‘annotate’ for requests: ‘pubmed’, ‘buildPubMedAbst’ when loading ‘RpsiXML’
No methods found in package ‘BiocGenerics’ for request: ‘plot’ when loading ‘SLGI’
** testing if installed package keeps a record of temporary installation path
* DONE (PCpheno)