Weiliang Qiu
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/GeneSelectMMD |
| Branch: RELEASE_3_9 |
| Last Commit: 49a63e6 |
| Last Changed Date: 2019-05-02 11:53:11 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:22:28 -0400 (Wed, 16 Oct 2019).
| Package 639/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| GeneSelectMMD 2.28.0 Weiliang Qiu
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: GeneSelectMMD |
| Version: 2.28.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/GeneSelectMMD_2.28.0.tar.gz && rm -rf GeneSelectMMD.buildbin-libdir && mkdir GeneSelectMMD.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneSelectMMD.buildbin-libdir GeneSelectMMD_2.28.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL GeneSelectMMD_2.28.0.zip && rm GeneSelectMMD_2.28.0.tar.gz GeneSelectMMD_2.28.0.zip |
| StartedAt: 2019-10-15 18:59:15 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 18:59:57 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 42.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/GeneSelectMMD_2.28.0.tar.gz && rm -rf GeneSelectMMD.buildbin-libdir && mkdir GeneSelectMMD.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneSelectMMD.buildbin-libdir GeneSelectMMD_2.28.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL GeneSelectMMD_2.28.0.zip && rm GeneSelectMMD_2.28.0.tar.gz GeneSelectMMD_2.28.0.zip
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install for i386
* installing *source* package 'GeneSelectMMD' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/gfortran -O3 -mtune=generic -c Qfunc.f -o Qfunc.o
C:/Rtools/mingw_32/bin/gfortran -O3 -mtune=generic -c blas.f -o blas.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c isnan.c -o isnan.o
C:/Rtools/mingw_32/bin/gfortran -O3 -mtune=generic -c lbfgsb.f -o lbfgsb.o
C:/Rtools/mingw_32/bin/gfortran -O3 -mtune=generic -c lbfgsbDriver.f -o lbfgsbDriver.o
C:/Rtools/mingw_32/bin/gfortran -O3 -mtune=generic -c linpack.f -o linpack.o
C:/Rtools/mingw_32/bin/gfortran -O3 -mtune=generic -c llkhFun.f -o llkhFun.o
C:/Rtools/mingw_32/bin/gfortran -O3 -mtune=generic -c myTtest.f -o myTtest.o
C:/Rtools/mingw_32/bin/gfortran -O3 -mtune=generic -c paraEstLoop.f -o paraEstLoop.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c pt.c -o pt.o
C:/Rtools/mingw_32/bin/gfortran -O3 -mtune=generic -c timer.f -o timer.o
C:/Rtools/mingw_32/bin/gfortran -O3 -mtune=generic -c wiFun.f -o wiFun.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o GeneSelectMMD.dll tmp.def Qfunc.o blas.o isnan.o lbfgsb.o lbfgsbDriver.o linpack.o llkhFun.o myTtest.o paraEstLoop.o pt.o timer.o wiFun.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -lgfortran -lm -lquadmath -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/GeneSelectMMD.buildbin-libdir/00LOCK-GeneSelectMMD/00new/GeneSelectMMD/libs/i386
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'GeneSelectMMD'
finding HTML links ... done
errRates html
gsMMD html
gsMMD.default html
gsMMD2 html
gsMMD2.default html
obtainResi html
finding level-2 HTML links ... done
plotHistDensity html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'GeneSelectMMD' ...
** libs
C:/Rtools/mingw_64/bin/gfortran -O2 -mtune=generic -c Qfunc.f -o Qfunc.o
C:/Rtools/mingw_64/bin/gfortran -O2 -mtune=generic -c blas.f -o blas.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c isnan.c -o isnan.o
C:/Rtools/mingw_64/bin/gfortran -O2 -mtune=generic -c lbfgsb.f -o lbfgsb.o
C:/Rtools/mingw_64/bin/gfortran -O2 -mtune=generic -c lbfgsbDriver.f -o lbfgsbDriver.o
C:/Rtools/mingw_64/bin/gfortran -O2 -mtune=generic -c linpack.f -o linpack.o
C:/Rtools/mingw_64/bin/gfortran -O2 -mtune=generic -c llkhFun.f -o llkhFun.o
C:/Rtools/mingw_64/bin/gfortran -O2 -mtune=generic -c myTtest.f -o myTtest.o
C:/Rtools/mingw_64/bin/gfortran -O2 -mtune=generic -c paraEstLoop.f -o paraEstLoop.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c pt.c -o pt.o
C:/Rtools/mingw_64/bin/gfortran -O2 -mtune=generic -c timer.f -o timer.o
C:/Rtools/mingw_64/bin/gfortran -O2 -mtune=generic -c wiFun.f -o wiFun.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o GeneSelectMMD.dll tmp.def Qfunc.o blas.o isnan.o lbfgsb.o lbfgsbDriver.o linpack.o llkhFun.o myTtest.o paraEstLoop.o pt.o timer.o wiFun.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -lgfortran -lm -lquadmath -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/GeneSelectMMD.buildbin-libdir/GeneSelectMMD/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GeneSelectMMD' as GeneSelectMMD_2.28.0.zip
* DONE (GeneSelectMMD)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'GeneSelectMMD' successfully unpacked and MD5 sums checked