Back to Multiple platform build/check report for BioC 3.9 |
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This page was generated on 2019-10-16 12:32:55 -0400 (Wed, 16 Oct 2019).
Package 447/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
DMRcaller 1.16.0 Nicolae Radu Zabet
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |||||||
celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: DMRcaller |
Version: 1.16.0 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/DMRcaller_1.16.0.tar.gz && rm -rf DMRcaller.buildbin-libdir && mkdir DMRcaller.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMRcaller.buildbin-libdir DMRcaller_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL DMRcaller_1.16.0.zip && rm DMRcaller_1.16.0.tar.gz DMRcaller_1.16.0.zip |
StartedAt: 2019-10-15 21:12:39 -0400 (Tue, 15 Oct 2019) |
EndedAt: 2019-10-15 21:13:27 -0400 (Tue, 15 Oct 2019) |
EllapsedTime: 48.2 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/DMRcaller_1.16.0.tar.gz && rm -rf DMRcaller.buildbin-libdir && mkdir DMRcaller.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMRcaller.buildbin-libdir DMRcaller_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL DMRcaller_1.16.0.zip && rm DMRcaller_1.16.0.tar.gz DMRcaller_1.16.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 1127k 100 1127k 0 0 15.9M 0 --:--:-- --:--:-- --:--:-- 17.4M install for i386 * installing *source* package 'DMRcaller' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'DMRcaller' finding HTML links ... done DMRcaller html finding level-2 HTML links ... done DMRsNoiseFilterCG html GEs html analyseReadsInsideRegionsForCondition html computeDMRs html computeDMRsReplicates html computeMethylationDataCoverage html computeMethylationDataSpatialCorrelation html computeMethylationProfile html computeOverlapProfile html extractGC html filterDMRs html getWholeChromosomes html joinReplicates html mergeDMRsIteratively html methylationDataList html plotLocalMethylationProfile html plotMethylationDataCoverage html plotMethylationDataSpatialCorrelation html plotMethylationProfile html plotMethylationProfileFromData html plotOverlapProfile html poolMethylationDatasets html poolTwoMethylationDatasets html readBismark html readBismarkPool html saveBismark html syntheticDataReplicates html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'DMRcaller' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'DMRcaller' as DMRcaller_1.16.0.zip * DONE (DMRcaller) * installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library' package 'DMRcaller' successfully unpacked and MD5 sums checked