Back to Multiple platform build/check report for BioC 3.9 |
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This page was generated on 2019-10-16 12:41:48 -0400 (Wed, 16 Oct 2019).
Package 1503/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
sesame 1.2.0 Wanding Zhou
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |||||||
celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: sesame |
Version: 1.2.0 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/sesame_1.2.0.tar.gz && rm -rf sesame.buildbin-libdir && mkdir sesame.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sesame.buildbin-libdir sesame_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL sesame_1.2.0.zip && rm sesame_1.2.0.tar.gz sesame_1.2.0.zip |
StartedAt: 2019-10-15 20:17:23 -0400 (Tue, 15 Oct 2019) |
EndedAt: 2019-10-15 20:20:41 -0400 (Tue, 15 Oct 2019) |
EllapsedTime: 197.9 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/sesame_1.2.0.tar.gz && rm -rf sesame.buildbin-libdir && mkdir sesame.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sesame.buildbin-libdir sesame_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL sesame_1.2.0.zip && rm sesame_1.2.0.tar.gz sesame_1.2.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 97k 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 97k 100 97k 0 0 1612k 0 --:--:-- --:--:-- --:--:-- 1775k install for i386 * installing *source* package 'sesame' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'sesame' finding HTML links ... done BetaValueToMValue html IG-methods html IG-replace-methods html II-methods html II-replace-methods html IR-methods html IR-replace-methods html MValueToBetaValue html RGChannelSetToSigSets html SNPcheck html SigSet-class html SigSetList-class html SigSetList-methods html SigSetList html SigSetListFromIDATs html SigSetListFromPath html SigSetToRatioSet html SigSetsToRGChannelSet html SignalSet html finding level-2 HTML links ... done as.data.frame.sesameQC html binSignals html bisConversionControl html buildControlMatrix450k html chipAddressToSignal html cnSegmentation html ctl-methods html ctl-replace-methods html detectionPfixedNorm html detectionPnegEcdf html detectionPnegNorm html detectionPnegNormGS html detectionPnegNormTotal html detectionPoobEcdf html detectionZero html diffRefSet html dyeBiasCorr html dyeBiasCorrMostBalanced html dyeBiasCorrTypeINorm html estimateCellComposition html estimateLeukocyte html getAFTypeIbySumAlleles html getBetas html getBinCoordinates html getNormCtls html getProbesByGene html getProbesByRegion html getProbesByTSS html getRefSet html getSexInfo html inferEthnicity html inferSex html inferSexKaryotypes html inferTypeIChannel html initFileSet html makeExampleSeSAMeDataSet html makeExampleTinyEPICDataSet html mapFileSet html meanIntensity html noob html noobsb html oobG-methods html oobG-replace-methods html oobR-methods html oobR-replace-methods html openSesame html openSesameToFile html parseGEOSignalABFile html predictAgeHorvath353 html predictAgePheno html predictAgeSkinBlood html print.fileSet html print.sesameQC html probeNames-methods html pval-methods html pval-replace-methods html readFileSet html readIDATpair html reopenSesame html searchIDATprefixes html segmentBins html sesame-package html sesameQC html sesamize html show-methods html signalR6toS4 html sliceFileSet html subsetSignal html totalIntensities html totalIntensityZscore html visualizeGene html visualizeProbes html visualizeRegion html visualizeSegments html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'sesame' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'sesame' as sesame_1.2.0.zip * DONE (sesame) * installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library' package 'sesame' successfully unpacked and MD5 sums checked