Yongchao Ge
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/flowPeaks |
| Branch: RELEASE_3_9 |
| Last Commit: 2f5c540 |
| Last Changed Date: 2019-05-02 11:53:36 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:01:14 -0400 (Wed, 16 Oct 2019).
| Package 572/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| flowPeaks 1.30.0 Yongchao Ge
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | [ OK ] | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: flowPeaks |
| Version: 1.30.0 |
| Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL flowPeaks |
| StartedAt: 2019-10-15 18:09:28 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 18:09:50 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 21.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL flowPeaks
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* installing to library ‘/home/biocbuild/bbs-3.9-bioc/R/library’
* installing *source* package ‘flowPeaks’ ...
** using staged installation
** libs
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include `gsl-config --cflags` -fpic -g -O2 -Wall -c Rpack.cpp -o Rpack.o
Rpack.cpp: In function ‘void Rpack_relevel(int*, int*, int*, int*, int*, int*)’:
Rpack.cpp:141:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if(levels.size()<(i+1)){
~~~~~~~~~~~~~^~~~~~
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include `gsl-config --cflags` -fpic -g -O2 -Wall -c Rregistrate.cpp -o Rregistrate.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include `gsl-config --cflags` -fpic -g -O2 -Wall -c VoronoiDiagramGenerator.cpp -o VoronoiDiagramGenerator.o
VoronoiDiagramGenerator.cpp: In member function ‘void VoronoiDiagramGenerator::out_site(Site*)’:
VoronoiDiagramGenerator.cpp:803:5: warning: suggest parentheses around operand of ‘!’ or change ‘&’ to ‘&&’ or ‘!’ to ‘~’ [-Wparentheses]
if(!triangulate & plot & !debug)
^~~~~~~~~~~~
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include `gsl-config --cflags` -fpic -g -O2 -Wall -c flowPeaks.cpp -o flowPeaks.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include `gsl-config --cflags` -fpic -g -O2 -Wall -c func_collect.cpp -o func_collect.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include `gsl-config --cflags` -fpic -g -O2 -Wall -c func_collect_supp.cpp -o func_collect_supp.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include `gsl-config --cflags` -fpic -g -O2 -Wall -c gvector_gmatrix.cpp -o gvector_gmatrix.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include `gsl-config --cflags` -fpic -g -O2 -Wall -c kd_tree.cpp -o kd_tree.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG -I/usr/local/include `gsl-config --cflags` -fpic -g -O2 -Wall -c kmns.cpp -o kmns.o
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.9-bioc/R/lib -L/usr/local/lib -o flowPeaks.so Rpack.o Rregistrate.o VoronoiDiagramGenerator.o flowPeaks.o func_collect.o func_collect_supp.o gvector_gmatrix.o kd_tree.o kmns.o -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -L/home/biocbuild/bbs-3.9-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.9-bioc/R/library/00LOCK-flowPeaks/00new/flowPeaks/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (flowPeaks)