Shaojun Tang
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/fCI |
| Branch: RELEASE_3_9 |
| Last Commit: 4a3d86b |
| Last Changed Date: 2019-05-02 11:53:55 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:33:30 -0400 (Wed, 16 Oct 2019).
| Package 542/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| fCI 1.14.0 Shaojun Tang
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: fCI |
| Version: 1.14.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/fCI_1.14.0.tar.gz && rm -rf fCI.buildbin-libdir && mkdir fCI.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=fCI.buildbin-libdir fCI_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL fCI_1.14.0.zip && rm fCI_1.14.0.tar.gz fCI_1.14.0.zip |
| StartedAt: 2019-10-15 19:21:44 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 19:25:04 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 200.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/fCI_1.14.0.tar.gz && rm -rf fCI.buildbin-libdir && mkdir fCI.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=fCI.buildbin-libdir fCI_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL fCI_1.14.0.zip && rm fCI_1.14.0.tar.gz fCI_1.14.0.zip
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install for i386
* installing *source* package 'fCI' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
in method for 'initialize' with signature '"NPCI"': no definition for class "NPCI"
in method for 'normalization' with signature '"NPCI"': no definition for class "NPCI"
in method for 'setfCI' with signature '"NPCI"': no definition for class "NPCI"
in method for 'populate' with signature '"NPCI"': no definition for class "NPCI"
in method for 'find.fci.targets' with signature '"NPCI"': no definition for class "NPCI"
in method for 'show.targets' with signature '"NPCI"': no definition for class "NPCI"
in method for 'call.npci' with signature '"NPCI"': no definition for class "NPCI"
in method for 'compute' with signature '"NPCI"': no definition for class "NPCI"
** help
*** installing help indices
converting help for package 'fCI'
finding HTML links ... done
NPCI-class html
call.npci-methods html
call.npci html
compute-methods html
compute html
deg.pairwise.fold.change html
deg.up.down.info html
deseq.median.ratio.normalization html
divergence.multivariate.distributions html
fCI-class html
fCI.call.by.index html
fci.data html
figures-methods html
figures html
find.fci.targets-methods html
find.fci.targets html
find.mid.point html
get.fold.large.step html
get.npci.data html
get.npci.distance.matrix html
get.outline.index html
get.protein.fold.step html
get.rank.combinations html
get.rna.fold.step html
initialize-methods html
intersect.of.lists html
is.installed html
multi.dimensional.fci.data html
normalization-methods html
normalization html
npci.gene.by.pvalues html
npci.index.reconsidered html
npci.index.to.be.removed html
npci.venn.diagram html
pairwise.change.occupancy html
populate-methods html
populate html
report.target.summary html
setfCI-methods html
setfCI html
show.targets-methods html
show.targets html
summarize-methods html
summarize html
total.library.size.normalization html
trim.size.normalization html
two.sample.log.ratio html
two.sample.permutation.test html
venndiagram-methods html
venndiagram html
** building package indices
** installing vignettes
'fCI.Rmd'
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'fCI' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'fCI' as fCI_1.14.0.zip
* DONE (fCI)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'fCI' successfully unpacked and MD5 sums checked