Package: adaptest

Version: 1.4.0

Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/adaptest_1.4.0.tar.gz && rm -rf adaptest.buildbin-libdir && mkdir adaptest.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=adaptest.buildbin-libdir adaptest_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL adaptest_1.4.0.zip && rm adaptest_1.4.0.tar.gz adaptest_1.4.0.zip

StartedAt: 2019-10-15 20:03:38 -0400 (Tue, 15 Oct 2019)

EndedAt: 2019-10-15 20:04:24 -0400 (Tue, 15 Oct 2019)

EllapsedTime: 46.3 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/adaptest_1.4.0.tar.gz && rm -rf adaptest.buildbin-libdir && mkdir adaptest.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=adaptest.buildbin-libdir adaptest_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL adaptest_1.4.0.zip && rm adaptest_1.4.0.tar.gz adaptest_1.4.0.zip
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install for i386

* installing *source* package 'adaptest' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'adaptest'
    finding HTML links ... done
    adapTMLE-class                          html  
    adaptest                                html  
    adaptest_old                            html  
    bioadaptest                             html  
    cv_param_est                            html  
    data_adapt                              html  
    get_composition                         html  
    get_pval                                html  
    get_results_adaptmle                    html  
    get_significant_biomarker               html  
    plot.data_adapt                         html  
    print.data_adapt                        html  
    rank_DE                                 html  
    rank_ttest                              html  
    simulated_array                         html  
    simulated_treatment                     html  
    summary.data_adapt                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'adaptest' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'adaptest' as adaptest_1.4.0.zip
* DONE (adaptest)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'adaptest' successfully unpacked and MD5 sums checked