Greg Finak
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/MIMOSA |
| Branch: RELEASE_3_9 |
| Last Commit: 47aebc2 |
| Last Changed Date: 2019-05-02 11:53:47 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:29:11 -0400 (Wed, 16 Oct 2019).
| Package 1000/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| MIMOSA 1.22.0 Greg Finak
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: MIMOSA |
| Version: 1.22.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/MIMOSA_1.22.0.tar.gz && rm -rf MIMOSA.buildbin-libdir && mkdir MIMOSA.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MIMOSA.buildbin-libdir MIMOSA_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL MIMOSA_1.22.0.zip && rm MIMOSA_1.22.0.tar.gz MIMOSA_1.22.0.zip |
| StartedAt: 2019-10-15 19:19:47 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 19:24:28 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 280.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/MIMOSA_1.22.0.tar.gz && rm -rf MIMOSA.buildbin-libdir && mkdir MIMOSA.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MIMOSA.buildbin-libdir MIMOSA_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL MIMOSA_1.22.0.zip && rm MIMOSA_1.22.0.tar.gz MIMOSA_1.22.0.zip
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install for i386
* installing *source* package 'MIMOSA' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/g++ -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppArmadillo/include" -I"C:/extsoft/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppArmadillo/include" -O2 -Wall -mtune=generic -c BetaMix.cpp -o BetaMix.o
C:/Rtools/mingw_32/bin/g++ -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppArmadillo/include" -I"C:/extsoft/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppArmadillo/include" -O2 -Wall -mtune=generic -c MCMC.cpp -o MCMC.o
MCMC.cpp: In function 'SEXPREC* fitMCMC(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
MCMC.cpp:73:9: warning: suggest parentheses around comparison in operand of '|' [-Wparentheses]
if(file==NULL|fileP==NULL){
^
MCMC.cpp:88:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
if(alphas.size()!=stim.ncol()){
^
MCMC.cpp:188:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for(int i=0;i >&)':
MCMC.cpp:627:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for(int i=0;i >&, std::vector >&, std::vector >&, std::vector >&, std::vector&, int, int)':
MCMC.cpp:677:12: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for(i=0;i < lnull.size(); i++){
^
MCMC.cpp: In function 'double normconstIBeta(double, double, double, double)':
MCMC.cpp:811:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for(int i=0;i >&)':
MCMC.cpp:627:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for(int i=0;i >&, std::vector >&, std::vector >&, std::vector >&, std::vector&, int, int)':
MCMC.cpp:677:12: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for(i=0;i < lnull.size(); i++){
^
MCMC.cpp: In function 'double normconstIBeta(double, double, double, double)':
MCMC.cpp:811:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for(int i=0;i