James Collins
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/LOBSTAHS |
| Branch: RELEASE_3_9 |
| Last Commit: 09ab651 |
| Last Changed Date: 2019-05-02 11:54:02 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:36:14 -0400 (Wed, 16 Oct 2019).
| Package 879/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| LOBSTAHS 1.10.0 James Collins
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: LOBSTAHS |
| Version: 1.10.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/LOBSTAHS_1.10.0.tar.gz && rm -rf LOBSTAHS.buildbin-libdir && mkdir LOBSTAHS.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=LOBSTAHS.buildbin-libdir LOBSTAHS_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL LOBSTAHS_1.10.0.zip && rm LOBSTAHS_1.10.0.tar.gz LOBSTAHS_1.10.0.zip |
| StartedAt: 2019-10-15 20:35:38 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 20:36:53 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 75.7 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/LOBSTAHS_1.10.0.tar.gz && rm -rf LOBSTAHS.buildbin-libdir && mkdir LOBSTAHS.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=LOBSTAHS.buildbin-libdir LOBSTAHS_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL LOBSTAHS_1.10.0.zip && rm LOBSTAHS_1.10.0.tar.gz LOBSTAHS_1.10.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 2702k 100 2702k 0 0 23.6M 0 --:--:-- --:--:-- --:--:-- 25.1M
install for i386
* installing *source* package 'LOBSTAHS' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'LOBSTAHS'
finding HTML links ... done
LOBSet-class html
finding level-2 HTML links ... done
LOBSet html
LOBdbase-class html
LOBdbase html
LOBdefaults html
doLOBscreen html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmp4WEfEL/R.INSTALL18a849c016b2/LOBSTAHS/man/doLOBscreen.Rd:20: file link 'findIsotopes' in package 'CAMERA' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmp4WEfEL/R.INSTALL18a849c016b2/LOBSTAHS/man/doLOBscreen.Rd:41: file link 'findIsotopes' in package 'CAMERA' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmp4WEfEL/R.INSTALL18a849c016b2/LOBSTAHS/man/doLOBscreen.Rd:125: file link 'findIsotopes' in package 'CAMERA' does not exist and so has been treated as a topic
exportDBtoCSV html
extractLOBdbasedata html
generateLOBdbase html
getLOBpeaklist html
loadLOBdbase html
** building package indices
** installing vignettes
'LOBSTAHS.Rmd' using 'UTF-8'
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'LOBSTAHS' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'LOBSTAHS' as LOBSTAHS_1.10.0.zip
* DONE (LOBSTAHS)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'LOBSTAHS' successfully unpacked and MD5 sums checked