Back to Multiple platform build/check report for BioC 3.9 |
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This page was generated on 2019-10-16 12:35:07 -0400 (Wed, 16 Oct 2019).
Package 529/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
ExperimentHubData 1.10.0 Bioconductor Package Maintainer
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | [ WARNINGS ] | OK | |||||||
celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: ExperimentHubData |
Version: 1.10.0 |
Command: C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:ExperimentHubData.install-out.txt --library=C:\Users\biocbuild\bbs-3.9-bioc\R\library --no-vignettes --timings ExperimentHubData_1.10.0.tar.gz |
StartedAt: 2019-10-16 03:38:17 -0400 (Wed, 16 Oct 2019) |
EndedAt: 2019-10-16 03:43:34 -0400 (Wed, 16 Oct 2019) |
EllapsedTime: 316.5 seconds |
RetCode: 0 |
Status: WARNINGS |
CheckDir: ExperimentHubData.Rcheck |
Warnings: 1 |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:ExperimentHubData.install-out.txt --library=C:\Users\biocbuild\bbs-3.9-bioc\R\library --no-vignettes --timings ExperimentHubData_1.10.0.tar.gz ### ############################################################################## ############################################################################## * using log directory 'C:/Users/biocbuild/bbs-3.9-bioc/meat/ExperimentHubData.Rcheck' * using R version 3.6.1 (2019-07-05) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * using option '--no-vignettes' * checking for file 'ExperimentHubData/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'ExperimentHubData' version '1.10.0' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'ExperimentHubData' can be installed ... WARNING Found the following significant warnings: Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpCkJElE/R.INSTALL13d428613fef/ExperimentHubData/man/addResources.Rd:62: file link 'AnnotationHubMetadata' in package 'AnnotationHubData' does not exist and so has been treated as a topic See 'C:/Users/biocbuild/bbs-3.9-bioc/meat/ExperimentHubData.Rcheck/00install.out' for details. * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking files in 'vignettes' ... OK * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 1 WARNING See 'C:/Users/biocbuild/bbs-3.9-bioc/meat/ExperimentHubData.Rcheck/00check.log' for details.
ExperimentHubData.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/ExperimentHubData_1.10.0.tar.gz && rm -rf ExperimentHubData.buildbin-libdir && mkdir ExperimentHubData.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ExperimentHubData.buildbin-libdir ExperimentHubData_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL ExperimentHubData_1.10.0.zip && rm ExperimentHubData_1.10.0.tar.gz ExperimentHubData_1.10.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 18304 100 18304 0 0 83417 0 --:--:-- --:--:-- --:--:-- 85934 install for i386 * installing *source* package 'ExperimentHubData' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'ExperimentHubData' finding HTML links ... done ExperimentHubMetadata-class html addResources html Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpCkJElE/R.INSTALL13d428613fef/ExperimentHubData/man/addResources.Rd:62: file link 'AnnotationHubMetadata' in package 'AnnotationHubData' does not exist and so has been treated as a topic makeExperimentHubMetadata html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'ExperimentHubData' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'ExperimentHubData' as ExperimentHubData_1.10.0.zip * DONE (ExperimentHubData) * installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library' package 'ExperimentHubData' successfully unpacked and MD5 sums checked
ExperimentHubData.Rcheck/examples_i386/ExperimentHubData-Ex.timings
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ExperimentHubData.Rcheck/examples_x64/ExperimentHubData-Ex.timings
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