Chia Kuan Hui Burton
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/EDDA |
| Branch: RELEASE_3_9 |
| Last Commit: 3f55569 |
| Last Changed Date: 2019-05-02 11:53:47 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:29:17 -0400 (Wed, 16 Oct 2019).
| Package 485/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| EDDA 1.22.0 Chia Kuan Hui Burton
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: EDDA |
| Version: 1.22.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/EDDA_1.22.0.tar.gz && rm -rf EDDA.buildbin-libdir && mkdir EDDA.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EDDA.buildbin-libdir EDDA_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL EDDA_1.22.0.zip && rm EDDA_1.22.0.tar.gz EDDA_1.22.0.zip |
| StartedAt: 2019-10-15 20:16:51 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 20:18:11 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 79.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/EDDA_1.22.0.tar.gz && rm -rf EDDA.buildbin-libdir && mkdir EDDA.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EDDA.buildbin-libdir EDDA_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL EDDA_1.22.0.zip && rm EDDA_1.22.0.tar.gz EDDA_1.22.0.zip
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install for i386
* installing *source* package 'EDDA' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/g++ -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=generic -c cuffdiff.cpp -o cuffdiff.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o EDDA.dll tmp.def cuffdiff.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/EDDA.buildbin-libdir/00LOCK-EDDA/00new/EDDA/libs/i386
** R
** data
** byte-compile and prepare package for lazy loading
No methods found in package 'baySeq' for request: 'rbind' when loading 'EDDA'
Note: possible error in 'exactTestByDeviance(y1, ': unused argument (big.count = big.count)
Note: possible error in 'exactTestBySmallP(y1, ': unused argument (big.count = big.count)
** help
*** installing help indices
converting help for package 'EDDA'
finding HTML links ... done
BP html
EDDA-package html
HBR html
SingleCell html
Wu html
computeAUC html
generateData html
plotPRC html
plotROC html
testDATs html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'baySeq' for request: 'rbind' when loading 'EDDA'
** testing if installed package can be loaded from final location
No methods found in package 'baySeq' for request: 'rbind' when loading 'EDDA'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'EDDA' ...
** libs
C:/Rtools/mingw_64/bin/g++ -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=generic -c cuffdiff.cpp -o cuffdiff.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o EDDA.dll tmp.def cuffdiff.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/EDDA.buildbin-libdir/EDDA/libs/x64
** testing if installed package can be loaded
No methods found in package 'baySeq' for request: 'rbind' when loading 'EDDA'
* MD5 sums
packaged installation of 'EDDA' as EDDA_1.22.0.zip
* DONE (EDDA)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'EDDA' successfully unpacked and MD5 sums checked