VJ Carey
| Snapshot Date: 2019-07-21 17:01:33 -0400 (Sun, 21 Jul 2019) |
| URL: https://git.bioconductor.org/packages/BiocOncoTK |
| Branch: RELEASE_3_9 |
| Last Commit: 2cd2204 |
| Last Changed Date: 2019-05-02 11:54:12 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-07-22 12:23:35 -0400 (Mon, 22 Jul 2019).
| Package 148/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| BiocOncoTK 1.4.0 VJ Carey
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: BiocOncoTK |
| Version: 1.4.0 |
| Command: rm -rf BiocOncoTK.buildbin-libdir && mkdir BiocOncoTK.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BiocOncoTK.buildbin-libdir BiocOncoTK_1.4.0.tar.gz |
| StartedAt: 2019-07-22 08:13:54 -0400 (Mon, 22 Jul 2019) |
| EndedAt: 2019-07-22 08:15:12 -0400 (Mon, 22 Jul 2019) |
| EllapsedTime: 77.6 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: BiocOncoTK_1.4.0.zip |
| PackageFileSize: 8.868 MiB |
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### Running command:
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### rm -rf BiocOncoTK.buildbin-libdir && mkdir BiocOncoTK.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BiocOncoTK.buildbin-libdir BiocOncoTK_1.4.0.tar.gz
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install for i386
* installing *source* package 'BiocOncoTK' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'BiocOncoTK'
finding HTML links ... done
CCLE_DRUG_BROAD html
TcgaMutCounts html
TcgaNIndWithAnyMut html
annotTabs html
bindMSI html
brcaMAE html
buildPancanSE html
cell_70138 html
clueDemos html
clueServiceNames html
darmGBMcls html
dingMSI html
featIDMapper html
fireMSI html
ggFeatDens html
ggFeatureSegs html
ggMutDens html
icd10_c html
loadPatel html
mc3toGR html
oncoPrintISB html
pancan.clin.varnames html
pancan_BQ html
finding level-2 HTML links ... done
pancan_app html
pancan_clinicalTabVarnames html
pancan_longname html
pancan_sampTypeMap html
pancan_tabulate html
pertClasses html
pert_70138 html
query_clue html
reexports html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpYN8B5o/R.INSTALL300c69ae499/BiocOncoTK/man/reexports.Rd:19: file link '%>%' in package 'magrittr' does not exist and so has been treated as a topic
replaceRownames html
tumNorSet html
utils html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'BiocOncoTK' ...
** using non-staged installation
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BiocOncoTK' as BiocOncoTK_1.4.0.zip
* DONE (BiocOncoTK)