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BUILD BIN report for tigre on merida2

This page was generated on 2019-04-09 13:25:12 -0400 (Tue, 09 Apr 2019).

Package 1609/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
tigre 1.37.0
Antti Honkela
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/tigre
Branch: master
Last Commit: 900cfe3
Last Changed Date: 2018-10-30 11:54:28 -0400 (Tue, 30 Oct 2018)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  ERROR 
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  ERROR  OK 
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  ERROR  OK 
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK [ OK ]

Summary

Package: tigre
Version: 1.37.0
Command: rm -rf tigre.buildbin-libdir && mkdir tigre.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh tigre_1.37.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R tigre.buildbin-libdir
StartedAt: 2019-04-09 06:39:30 -0400 (Tue, 09 Apr 2019)
EndedAt: 2019-04-09 06:40:49 -0400 (Tue, 09 Apr 2019)
EllapsedTime: 78.5 seconds
RetCode: 0
Status:  OK 
PackageFile: tigre_1.37.0.tgz
PackageFileSize: 1.081 MiB

Command output

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###
### Running command:
###
###   rm -rf tigre.buildbin-libdir && mkdir tigre.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh tigre_1.37.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R tigre.buildbin-libdir
###
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>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=tigre.buildbin-libdir tigre_1.37.0.tar.gz'
>>>>>>> 

* installing *source* package ‘tigre’ ...
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/usr/local/include   -fPIC  -Wall -g -O2  -c miscCFunctions.c -o miscCFunctions.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o tigre.so miscCFunctions.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-3.9-bioc/meat/tigre.buildbin-libdir/tigre/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (tigre)


>>>>>>> 
>>>>>>> FIXING LINKS FOR tigre.buildbin-libdir/tigre/libs//tigre.so
>>>>>>> 

install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libgcc_s.1.dylib" "tigre.buildbin-libdir/tigre/libs//tigre.so"
install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libgfortran.3.dylib" "tigre.buildbin-libdir/tigre/libs//tigre.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libreadline.5.2.dylib" "tigre.buildbin-libdir/tigre/libs//tigre.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libreadline.dylib" "tigre.buildbin-libdir/tigre/libs//tigre.so"
install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libquadmath.0.dylib" "tigre.buildbin-libdir/tigre/libs//tigre.so"