Zilu Zhou
| Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019) |
| URL: https://git.bioconductor.org/packages/iCNV |
| Branch: master |
| Last Commit: 611c24b |
| Last Changed Date: 2019-01-04 13:35:56 -0400 (Fri, 04 Jan 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-04-09 12:37:14 -0400 (Tue, 09 Apr 2019).
| Package 778/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| iCNV 1.3.1 Zilu Zhou
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK |
| Package: iCNV |
| Version: 1.3.1 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/iCNV_1.3.1.tar.gz && rm -rf iCNV.buildbin-libdir && mkdir iCNV.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=iCNV.buildbin-libdir iCNV_1.3.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL iCNV_1.3.1.zip && rm iCNV_1.3.1.tar.gz iCNV_1.3.1.zip |
| StartedAt: 2019-04-08 20:13:59 -0400 (Mon, 08 Apr 2019) |
| EndedAt: 2019-04-08 20:16:03 -0400 (Mon, 08 Apr 2019) |
| EllapsedTime: 124.1 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/iCNV_1.3.1.tar.gz && rm -rf iCNV.buildbin-libdir && mkdir iCNV.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=iCNV.buildbin-libdir iCNV_1.3.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL iCNV_1.3.1.zip && rm iCNV_1.3.1.tar.gz iCNV_1.3.1.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
7 1218k 7 98304 0 0 442k 0 0:00:02 --:--:-- 0:00:02 454k
100 1218k 100 1218k 0 0 4301k 0 --:--:-- --:--:-- --:--:-- 4383k
install for i386
* installing *source* package 'iCNV' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Note: break used in wrong context: no loop is visible
** help
*** installing help indices
converting help for package 'iCNV'
finding HTML links ... done
bambaf_from_vcf html
bed_generator html
chr html
filenm html
get_array_input html
iCNV_detection html
icnv_output_to_gb html
icnv_res0 html
ngs_baf html
ngs_baf.chr html
ngs_baf.id html
ngs_baf.nm html
ngs_baf.pos html
ngs_plr html
ngs_plr.pos html
normObj html
output_list html
plotHMMscore html
plot_intensity html
plotindi html
projname html
qcObj html
sampname html
sampname_qc html
snp_baf html
snp_baf.pos html
snp_lrr html
snp_lrr.pos html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'iCNV' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'iCNV' as iCNV_1.3.1.zip
* DONE (iCNV)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'iCNV' successfully unpacked and MD5 sums checked