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CHECK report for graper on malbec2

This page was generated on 2019-04-09 11:52:30 -0400 (Tue, 09 Apr 2019).

Package 700/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
graper 0.99.3
Britta Velten
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/graper
Branch: master
Last Commit: 15c55e7
Last Changed Date: 2019-01-29 11:43:47 -0400 (Tue, 29 Jan 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK 

Summary

Package: graper
Version: 0.99.3
Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.9-bioc/R/library --no-vignettes --timings graper_0.99.3.tar.gz
StartedAt: 2019-04-09 01:02:18 -0400 (Tue, 09 Apr 2019)
EndedAt: 2019-04-09 01:03:28 -0400 (Tue, 09 Apr 2019)
EllapsedTime: 70.3 seconds
RetCode: 0
Status:  OK 
CheckDir: graper.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.9-bioc/R/library --no-vignettes --timings graper_0.99.3.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.9-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2019-03-18 r76245)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘0.99.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  ‘/home/biocbuild/bbs-3.9-bioc/meat/graper.Rcheck/00check.log’
for details.



Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.9-bioc/R/library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG  -I"/home/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/RcppArmadillo/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/BH/include" -I/usr/local/include  -fpic  -g -O2  -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG  -I"/home/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/RcppArmadillo/include" -I"/home/biocbuild/bbs-3.9-bioc/R/library/BH/include" -I/usr/local/include  -fpic  -g -O2  -Wall -c fit_graper.cpp -o fit_graper.o
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.9-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -L/home/biocbuild/bbs-3.9-bioc/R/lib -lRlapack -L/home/biocbuild/bbs-3.9-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.9-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.9-bioc/R/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R Under development (unstable) (2019-03-18 r76245) -- "Unsuffered Consequences"
Copyright (C) 2019 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-887.019
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-582.249
ELB improved by 304.77

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-522.528
ELB improved by 59.7211

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-484.964
ELB improved by 37.5643

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.766
ELB improved by 18.1982

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.028
ELB improved by 8.73768

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.262
ELB improved by 4.76636

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.916
ELB improved by 3.34603

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.041
ELB improved by 2.87472

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.34
ELB improved by 2.70069

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.731
ELB improved by 2.6091

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.22
ELB improved by 2.51143

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.862
ELB improved by 2.35789

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.753
ELB improved by 2.10861

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.997
ELB improved by 1.75623

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.634
ELB improved by 1.36292

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.624
ELB improved by 1.00997

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.886
ELB improved by 0.738335

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.338
ELB improved by 0.547858

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.918
ELB improved by 0.419876

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.584
ELB improved by 0.334031

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.309
ELB improved by 0.274847

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.077
ELB improved by 0.232278

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.876
ELB improved by 0.200272

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.701
ELB improved by 0.175268

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.546
ELB improved by 0.155145

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.407
ELB improved by 0.138593

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.283
ELB improved by 0.124765

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.17
ELB improved by 0.113083

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.066
ELB improved by 0.103135

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.972
ELB improved by 0.0946134

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.885
ELB improved by 0.0872827

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.804
ELB improved by 0.0809585

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.728
ELB improved by 0.0754932

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.657
ELB improved by 0.0707678

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.591
ELB improved by 0.0666848

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.527
ELB improved by 0.0631641

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.467
ELB improved by 0.0601397

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.41
ELB improved by 0.0575562

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.354
ELB improved by 0.0553679

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.301
ELB improved by 0.0535363

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.249
ELB improved by 0.0520294

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.198
ELB improved by 0.05082

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.148
ELB improved by 0.0498857

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.099
ELB improved by 0.0492076

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.05
ELB improved by 0.0487698

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.002
ELB improved by 0.0485593

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.953
ELB improved by 0.0485653

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.904
ELB improved by 0.0487789

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.855
ELB improved by 0.0491933

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.805
ELB improved by 0.0498028

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.755
ELB improved by 0.0506038

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.703
ELB improved by 0.0515939

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.65
ELB improved by 0.0527723

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.596
ELB improved by 0.0541402

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.54
ELB improved by 0.0557005

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.483
ELB improved by 0.0574585

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.424
ELB improved by 0.059422

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.362
ELB improved by 0.0616021

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.298
ELB improved by 0.0640134

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.231
ELB improved by 0.0666753

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.162
ELB improved by 0.0696127

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.089
ELB improved by 0.0728579

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.012
ELB improved by 0.0764534

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.932
ELB improved by 0.0804569

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.847
ELB improved by 0.084949

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.757
ELB improved by 0.0900474

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.661
ELB improved by 0.0959322

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.558
ELB improved by 0.10289

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.447
ELB improved by 0.111396

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.324
ELB improved by 0.122265

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.188
ELB improved by 0.136931

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.03
ELB improved by 0.157962

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.84
ELB improved by 0.189854

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.6
ELB improved by 0.239521

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.287
ELB improved by 0.313494

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.879
ELB improved by 0.407278

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.38
ELB improved by 0.499741

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.804
ELB improved by 0.575497

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.175
ELB improved by 0.629063

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.527
ELB improved by 0.648211

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.888
ELB improved by 0.639175

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.265
ELB improved by 0.622596

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.666
ELB improved by 0.599405

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.103
ELB improved by 0.562223

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.584
ELB improved by 0.5198

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.103
ELB improved by 0.480254

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.658
ELB improved by 0.445311

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.22
ELB improved by 0.438316

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.731
ELB improved by 0.488887

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.17
ELB improved by 0.561251

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.622
ELB improved by 0.547799

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.177
ELB improved by 0.445153

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.839
ELB improved by 0.337886

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.592
ELB improved by 0.247123

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.422
ELB improved by 0.169343

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.311
ELB improved by 0.110922

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.239
ELB improved by 0.0726834

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.19
ELB improved by 0.0490062

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.155
ELB improved by 0.0343722

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.13
ELB improved by 0.0251525

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.111
ELB improved by 0.0191892

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.096
ELB improved by 0.0152184

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.083
ELB improved by 0.0124931

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.073
ELB improved by 0.0105641

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.064
ELB improved by 0.00915608

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-876.86
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-541.499
ELB improved by 335.361

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-490.692
ELB improved by 50.8075

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.185
ELB improved by 23.5064

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.604
ELB improved by 9.58158

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.587
ELB improved by 6.01699

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.396
ELB improved by 5.19017

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.285
ELB improved by 5.11101

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.22
ELB improved by 5.06491

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.54
ELB improved by 4.68046

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.631
ELB improved by 3.90937

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.631
ELB improved by 2.99916

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.386
ELB improved by 2.24524

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.663
ELB improved by 1.72336

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.355
ELB improved by 1.30834

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.381
ELB improved by 0.973786

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.636
ELB improved by 0.74455

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.043
ELB improved by 0.592949

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.555
ELB improved by 0.487985

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.142
ELB improved by 0.41323

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.783
ELB improved by 0.359385

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.462
ELB improved by 0.320324

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.17
ELB improved by 0.292141

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.898
ELB improved by 0.27242

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.638
ELB improved by 0.259505

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.386
ELB improved by 0.252073

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.137
ELB improved by 0.248946

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.888
ELB improved by 0.248982

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.637
ELB improved by 0.250927

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.384
ELB improved by 0.253298

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.13
ELB improved by 0.254464

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.877
ELB improved by 0.253039

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.628
ELB improved by 0.248378

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.387
ELB improved by 0.2407

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.157
ELB improved by 0.230754

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.937
ELB improved by 0.219389

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.73
ELB improved by 0.207335

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.535
ELB improved by 0.195162

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.351
ELB improved by 0.183294

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.179
ELB improved by 0.172024

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.018
ELB improved by 0.161531

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.866
ELB improved by 0.151903

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.723
ELB improved by 0.143159

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.588
ELB improved by 0.135274

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.459
ELB improved by 0.128195

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.338
ELB improved by 0.121854

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.221
ELB improved by 0.116178

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.11
ELB improved by 0.111097

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.004
ELB improved by 0.106547

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.901
ELB improved by 0.102471

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.802
ELB improved by 0.0988335

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.707
ELB improved by 0.0956166

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.614
ELB improved by 0.0928367

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.523
ELB improved by 0.0905592

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.434
ELB improved by 0.0889279

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.346
ELB improved by 0.0882196

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.257
ELB improved by 0.0889541

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.165
ELB improved by 0.0921278

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.065
ELB improved by 0.0997448

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.949
ELB improved by 0.116065

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.799
ELB improved by 0.150481

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.576
ELB improved by 0.222757

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.213
ELB improved by 0.362757

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.653
ELB improved by 0.56055

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.987
ELB improved by 0.666288

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.403
ELB improved by 0.583576

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.955
ELB improved by 0.448159

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.615
ELB improved by 0.339872

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.356
ELB improved by 0.259228

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.157
ELB improved by 0.198361

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.005
ELB improved by 0.152579

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.886
ELB improved by 0.118801

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.791
ELB improved by 0.0945799

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.713
ELB improved by 0.0779627

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.646
ELB improved by 0.0675581

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.583
ELB improved by 0.062623

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.52
ELB improved by 0.0631792

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.45
ELB improved by 0.070182

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.364
ELB improved by 0.0855867

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.253
ELB improved by 0.111645

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.104
ELB improved by 0.148492

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.912
ELB improved by 0.191929

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.678
ELB improved by 0.23436

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.424
ELB improved by 0.254047

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.21
ELB improved by 0.214165

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.076
ELB improved by 0.133857

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.006
ELB improved by 0.0700553

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.97
ELB improved by 0.0360164

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.95
ELB improved by 0.0201311

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.937
ELB improved by 0.012752

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.928
ELB improved by 0.00912294

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-889.13
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-600.82
ELB improved by 288.311

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-539.341
ELB improved by 61.4789

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-488.375
ELB improved by 50.9656

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-461.108
ELB improved by 27.267

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.213
ELB improved by 10.8955

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.598
ELB improved by 5.61515

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.488
ELB improved by 4.10968

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.866
ELB improved by 3.62155

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.256
ELB improved by 3.61005

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.382
ELB improved by 3.87403

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.096
ELB improved by 4.28638

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.445
ELB improved by 4.65088

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.801
ELB improved by 4.64375

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.771
ELB improved by 4.03005

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.769
ELB improved by 3.00221

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.761
ELB improved by 2.00853

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.463
ELB improved by 1.29739

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.604
ELB improved by 0.858781

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.004
ELB improved by 0.60068

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.557
ELB improved by 0.446301

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.208
ELB improved by 0.349139

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.924
ELB improved by 0.284141

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.686
ELB improved by 0.238178

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.482
ELB improved by 0.204208

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.303
ELB improved by 0.178259

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.146
ELB improved by 0.157954

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.004
ELB improved by 0.141793

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.875
ELB improved by 0.12878

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.757
ELB improved by 0.118226

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.647
ELB improved by 0.109639

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.544
ELB improved by 0.102658

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.447
ELB improved by 0.0970101

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.355
ELB improved by 0.0924872

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.266
ELB improved by 0.0889272

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.18
ELB improved by 0.086202

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.096
ELB improved by 0.0842095

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.013
ELB improved by 0.0828667

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.931
ELB improved by 0.0821055

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.849
ELB improved by 0.081869

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.767
ELB improved by 0.0821086

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.684
ELB improved by 0.082782

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.6
ELB improved by 0.0838512

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.515
ELB improved by 0.0852811

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.428
ELB improved by 0.0870385

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.339
ELB improved by 0.0890904

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.247
ELB improved by 0.0914037

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.153
ELB improved by 0.0939434

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.057
ELB improved by 0.0966724

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.957
ELB improved by 0.0995499

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.855
ELB improved by 0.102531

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.749
ELB improved by 0.105565

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.64
ELB improved by 0.108597

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.529
ELB improved by 0.111567

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.414
ELB improved by 0.114414

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.297
ELB improved by 0.117078

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.178
ELB improved by 0.119508

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.056
ELB improved by 0.121669

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.933
ELB improved by 0.123558

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.807
ELB improved by 0.125223

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.681
ELB improved by 0.126788

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.552
ELB improved by 0.12849

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.421
ELB improved by 0.130735

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.287
ELB improved by 0.134174

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.147
ELB improved by 0.139771

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.999
ELB improved by 0.148727

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.837
ELB improved by 0.161819

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.659
ELB improved by 0.177467

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.47
ELB improved by 0.189488

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.28
ELB improved by 0.189983

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.102
ELB improved by 0.178281

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.94
ELB improved by 0.161615

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.794
ELB improved by 0.146355

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.659
ELB improved by 0.134799

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.532
ELB improved by 0.127037

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.41
ELB improved by 0.121849

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.293
ELB improved by 0.116712

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.184
ELB improved by 0.109221

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.084
ELB improved by 0.099951

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.991
ELB improved by 0.0932567

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.896
ELB improved by 0.0952636

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.783
ELB improved by 0.112904

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.63
ELB improved by 0.152933

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.418
ELB improved by 0.211399

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.157
ELB improved by 0.261677

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.872
ELB improved by 0.284514

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.583
ELB improved by 0.288871

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.304
ELB improved by 0.279187

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.055
ELB improved by 0.249136

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.86
ELB improved by 0.195084

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.728
ELB improved by 0.13207

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.645
ELB improved by 0.0829281

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.591
ELB improved by 0.0540443

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.551
ELB improved by 0.0398744

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.516
ELB improved by 0.0347482

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.48
ELB improved by 0.0360536

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.436
ELB improved by 0.0437337

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.377
ELB improved by 0.0594153

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.292
ELB improved by 0.0847786

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.174
ELB improved by 0.118013

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.024
ELB improved by 0.149989

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.861
ELB improved by 0.163213

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.719
ELB improved by 0.141908

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.621
ELB improved by 0.0984719

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.559
ELB improved by 0.0617634

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.518
ELB improved by 0.0411737

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.487
ELB improved by 0.0311655

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.46
ELB improved by 0.026097

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.437
ELB improved by 0.0233133

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.415
ELB improved by 0.0218617

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.394
ELB improved by 0.021441

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.372
ELB improved by 0.0219764

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.348
ELB improved by 0.0234859

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.322
ELB improved by 0.0260205

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.293
ELB improved by 0.0295835

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.259
ELB improved by 0.0339898

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.22
ELB improved by 0.0387001

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.177
ELB improved by 0.0427852

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.132
ELB improved by 0.0452221

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.087
ELB improved by 0.0454482

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.043
ELB improved by 0.0436899

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.002
ELB improved by 0.040746

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.965
ELB improved by 0.0375102

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.93
ELB improved by 0.0346356

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.898
ELB improved by 0.0324163

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.867
ELB improved by 0.030807

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.837
ELB improved by 0.0295301

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.809
ELB improved by 0.0282286

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.782
ELB improved by 0.0266035

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.758
ELB improved by 0.0244827

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.736
ELB improved by 0.0218361

iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.717
ELB improved by 0.0187792

iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.702
ELB improved by 0.0155582

iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.689
ELB improved by 0.0124816

iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.679
ELB improved by 0.00980899

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-865.42
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-587.389
ELB improved by 278.031

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-527.374
ELB improved by 60.0149

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-483.068
ELB improved by 44.3063

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.682
ELB improved by 23.3864

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.738
ELB improved by 9.94331

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.349
ELB improved by 5.38921

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.109
ELB improved by 4.23967

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.155
ELB improved by 3.95404

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.281
ELB improved by 3.87439

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.519
ELB improved by 3.7616

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.998
ELB improved by 3.52129

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.83
ELB improved by 3.16764

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.103
ELB improved by 2.7277

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.903
ELB improved by 2.19984

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.218
ELB improved by 1.68484

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.948
ELB improved by 1.27009

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.984
ELB improved by 0.963917

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.242
ELB improved by 0.742364

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.667
ELB improved by 0.574894

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.225
ELB improved by 0.442017

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.887
ELB improved by 0.337341

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.629
ELB improved by 0.258526

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.427
ELB improved by 0.201911

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.265
ELB improved by 0.162143

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.131
ELB improved by 0.13388

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.018
ELB improved by 0.113093

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.921
ELB improved by 0.0971956

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.836
ELB improved by 0.0846236

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.762
ELB improved by 0.0744239

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.696
ELB improved by 0.0659924

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.637
ELB improved by 0.0589286

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.584
ELB improved by 0.0529549

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.536
ELB improved by 0.0478731

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.492
ELB improved by 0.0435383

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.452
ELB improved by 0.0398446

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.416
ELB improved by 0.0367169

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.382
ELB improved by 0.0341073

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.35
ELB improved by 0.0319952

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.319
ELB improved by 0.0303917

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.29
ELB improved by 0.029349

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.261
ELB improved by 0.0289773

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.231
ELB improved by 0.029472

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.2
ELB improved by 0.031149

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.166
ELB improved by 0.0344758

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.126
ELB improved by 0.0400356

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.078
ELB improved by 0.0482684

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.019
ELB improved by 0.0587335

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.95
ELB improved by 0.0689625

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.876
ELB improved by 0.0742734

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.805
ELB improved by 0.0706467

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.746
ELB improved by 0.0588373

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.702
ELB improved by 0.0439762

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.671
ELB improved by 0.030966

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.649
ELB improved by 0.0217375

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.633
ELB improved by 0.0159397

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.621
ELB improved by 0.012494

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.61
ELB improved by 0.0104493

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.601
ELB improved by 0.00918149

ELB converged
══ testthat results  ═══════════════════════════════════════════════════════════
OK: 24 SKIPPED: 0 FAILED: 0
> 
> proc.time()
   user  system elapsed 
  2.662   0.112   2.796 

Example timings

graper.Rcheck/graper-Ex.timings

nameusersystemelapsed
coef.graper0.0630.0120.126
getPIPs0.0530.0130.067
graper0.1030.0120.119
makeExampleData0.0160.0000.016
makeExampleDataWithUnequalGroups0.0190.0000.018
plotELBO0.3110.0040.321
plotGroupPenalties0.8850.0040.905
plotPosterior0.8690.0080.882
predict.graper2.9060.0202.952
print.graper0.0640.0040.070