Sunyoung Shin
| Snapshot Date: 2019-04-02 17:01:51 -0400 (Tue, 02 Apr 2019) |
| URL: https://git.bioconductor.org/packages/atSNP |
| Branch: master |
| Last Commit: ad43b8c |
| Last Changed Date: 2019-02-24 23:55:20 -0400 (Sun, 24 Feb 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-04-03 11:51:33 -0400 (Wed, 03 Apr 2019).
| Package 90/1696 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| atSNP 0.99.21 Sunyoung Shin
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
| Package: atSNP |
| Version: 0.99.21 |
| Command: rm -rf atSNP.buildbin-libdir && mkdir atSNP.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=atSNP.buildbin-libdir atSNP_0.99.21.tar.gz |
| StartedAt: 2019-04-03 07:37:13 -0400 (Wed, 03 Apr 2019) |
| EndedAt: 2019-04-03 07:38:45 -0400 (Wed, 03 Apr 2019) |
| EllapsedTime: 91.9 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: atSNP_0.99.21.zip |
| PackageFileSize: 1.699 MiB |
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### Running command:
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### rm -rf atSNP.buildbin-libdir && mkdir atSNP.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=atSNP.buildbin-libdir atSNP_0.99.21.tar.gz
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install for i386
* installing *source* package 'atSNP' ...
** libs
C:/Rtools/mingw_32/bin/g++ -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=generic -c ImportanceSample.cpp -o ImportanceSample.o
C:/Rtools/mingw_32/bin/g++ -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=generic -c ImportanceSampleChange.cpp -o ImportanceSampleChange.o
C:/Rtools/mingw_32/bin/g++ -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=generic -c ImportanceSampleDiff.cpp -o ImportanceSampleDiff.o
C:/Rtools/mingw_32/bin/g++ -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=generic -c MotifScore.cpp -o MotifScore.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o atSNP.dll tmp.def ImportanceSample.o ImportanceSampleChange.o ImportanceSampleDiff.o MotifScore.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/atSNP.buildbin-libdir/00LOCK-atSNP/00new/atSNP/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'atSNP'
finding HTML links ... done
ComputeMotifScore html
ComputePValues html
GetIUPACSequence html
LoadFastaData html
LoadMotifLibrary html
LoadSNPData html
MatchSubsequence html
atSNP-package html
dtMotifMatch html
encode_motif html
encode_motifinfo html
jaspar_motif html
jaspar_motifinfo html
motif_library html
motif_match html
motif_scores html
plotMotifMatch html
prior html
snpInfo html
snp_tbl html
transition html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'atSNP' ...
** libs
C:/Rtools/mingw_64/bin/g++ -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=generic -c ImportanceSample.cpp -o ImportanceSample.o
C:/Rtools/mingw_64/bin/g++ -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=generic -c ImportanceSampleChange.cpp -o ImportanceSampleChange.o
C:/Rtools/mingw_64/bin/g++ -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=generic -c ImportanceSampleDiff.cpp -o ImportanceSampleDiff.o
C:/Rtools/mingw_64/bin/g++ -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=generic -c MotifScore.cpp -o MotifScore.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o atSNP.dll tmp.def ImportanceSample.o ImportanceSampleChange.o ImportanceSampleDiff.o MotifScore.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/atSNP.buildbin-libdir/atSNP/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'atSNP' as atSNP_0.99.21.zip
* DONE (atSNP)