Package: Vega

Version: 1.31.0

Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL Vega

StartedAt: 2019-04-08 17:57:44 -0400 (Mon, 08 Apr 2019)

EndedAt: 2019-04-08 17:57:50 -0400 (Mon, 08 Apr 2019)

EllapsedTime: 6.4 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL Vega
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* installing to library ‘/home/biocbuild/bbs-3.9-bioc/R/library’
* installing *source* package ‘Vega’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG   -I/usr/local/include  -fpic  -g -O2  -Wall -c vega.c -o vega.o
vega.c: In function ‘heap_delete’:
vega.c:201:8: warning: variable ‘deleted’ set but not used [-Wunused-but-set-variable]
   node deleted;
        ^˜˜˜˜˜˜
vega.c: In function ‘vega’:
vega.c:355:13: warning: unused variable ‘maxptr’ [-Wunused-variable]
  node max, *maxptr, tmp_node;
             ^˜˜˜˜˜
vega.c:348:68: warning: unused variable ‘tmp_lambda2’ [-Wunused-variable]
  double lambda, lambda_gradient, stop_lambda_gradient, tmp_lambda, tmp_lambda2;
                                                                    ^˜˜˜˜˜˜˜˜˜˜
vega.c:347:6: warning: unused variable ‘index’ [-Wunused-variable]
  int index;
      ^˜˜˜˜
vega.c: In function ‘update_priority’:
vega.c:560:64: warning: unused variable ‘next_mean’ [-Wunused-variable]
  double lambda, first_term, second_term, prev_mean, curr_mean, next_mean;
                                                                ^˜˜˜˜˜˜˜˜
gcc -shared -L/home/biocbuild/bbs-3.9-bioc/R/lib -L/usr/local/lib -o Vega.so vega.o -L/home/biocbuild/bbs-3.9-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.9-bioc/R/library/00LOCK-Vega/00new/Vega/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Vega)