Package: RTopper

Version: 1.29.0

Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/RTopper_1.29.0.tar.gz && rm -rf RTopper.buildbin-libdir && mkdir RTopper.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RTopper.buildbin-libdir RTopper_1.29.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL RTopper_1.29.0.zip && rm RTopper_1.29.0.tar.gz RTopper_1.29.0.zip

StartedAt: 2019-04-08 18:45:57 -0400 (Mon, 08 Apr 2019)

EndedAt: 2019-04-08 18:46:31 -0400 (Mon, 08 Apr 2019)

EllapsedTime: 33.9 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/RTopper_1.29.0.tar.gz && rm -rf RTopper.buildbin-libdir && mkdir RTopper.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RTopper.buildbin-libdir RTopper_1.29.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL RTopper_1.29.0.zip && rm RTopper_1.29.0.tar.gz RTopper_1.29.0.zip
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install for i386

* installing *source* package 'RTopper' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RTopper'
    finding HTML links ... done
    RTopper-package                         html  
    adjustPvalGSE                           html  
    finding level-2 HTML links ... done

    combineGSE                              html  
    computeDrStat                           html  
    convertToDr                             html  
    dat                                     html  
    fgsList                                 html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpgpWDJg/R.INSTALL9f040b6746/RTopper/man/fgsList.Rd:37: file link 'org.Hs.eg' in package 'org.Hs.eg.db' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpgpWDJg/R.INSTALL9f040b6746/RTopper/man/fgsList.Rd:41: file link 'GO' in package 'GO.db' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpgpWDJg/R.INSTALL9f040b6746/RTopper/man/fgsList.Rd:42: file link 'KEGG' in package 'KEGG.db' does not exist and so has been treated as a topic
    gseResultsSep                           html  
    intScores                               html  
    pheno                                   html  
    runBatchGSE                             html  
    sepScores                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'RTopper' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RTopper' as RTopper_1.29.0.zip
* DONE (RTopper)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'RTopper' successfully unpacked and MD5 sums checked