BioC experimental data: CHECK report for frmaExampleData on malbec2

Package: frmaExampleData

Version: 1.12.0

Command: /home/biocbuild/bbs-3.5-bioc/R/bin/R CMD check --no-vignettes --timings frmaExampleData_1.12.0.tar.gz

StartedAt: 2017-10-18 10:45:10 -0400 (Wed, 18 Oct 2017)

EndedAt: 2017-10-18 10:47:11 -0400 (Wed, 18 Oct 2017)

EllapsedTime: 120.8 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: frmaExampleData.Rcheck

Warnings: 1

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### Running command:
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###   /home/biocbuild/bbs-3.5-bioc/R/bin/R CMD check --no-vignettes --timings frmaExampleData_1.12.0.tar.gz
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* using log directory ‘/home/biocbuild/bbs-3.5-data-experiment/meat/frmaExampleData.Rcheck’
* using R version 3.4.2 (2017-09-28)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘frmaExampleData/DESCRIPTION’ ... OK
* this is package ‘frmaExampleData’ version ‘1.12.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘frmaExampleData’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is 22.8Mb
  sub-directories of 1Mb or more:
    data  22.7Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
                        old_size new_size compress
  AffyBatch133a.rda       10.8Mb    6.8Mb       xz
  AffyBatch133atag.rda     2.2Mb    826Kb       xz
  AffyBatch133plus2.rda    5.4Mb    2.2Mb       xz
  AffyBatchExample.rda     4.3Mb    2.2Mb       xz
* checking examples ... OK
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 2 NOTEs
See
  ‘/home/biocbuild/bbs-3.5-data-experiment/meat/frmaExampleData.Rcheck/00check.log’
for details.

* installing *source* package ‘frmaExampleData’ ...
** data
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (frmaExampleData)

name	user	system	elapsed
AffyBatch133a	0.684	0.056	0.742
AffyBatch133atag	0.208	0.004	0.211
AffyBatch133plus2	1.152	0.052	1.201
AffyBatchExample	0.232	0.020	0.255