BioC experimental data: CHECK report for GSVAdata on windows1.bioconductor.org

Package: GSVAdata

Version: 1.6.0

Command: rm -rf GSVAdata.buildbin-libdir GSVAdata.Rcheck && mkdir GSVAdata.buildbin-libdir GSVAdata.Rcheck && C:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=GSVAdata.buildbin-libdir GSVAdata_1.6.0.tar.gz >GSVAdata.Rcheck\00install.out 2>&1 && cp GSVAdata.Rcheck\00install.out GSVAdata-install.out && C:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD check --library=GSVAdata.buildbin-libdir --install="check:GSVAdata-install.out" --force-multiarch --no-vignettes --timings GSVAdata_1.6.0.tar.gz

StartedAt: 2015-10-24 14:57:12 -0400 (Sat, 24 Oct 2015)

EndedAt: 2015-10-24 14:58:17 -0400 (Sat, 24 Oct 2015)

EllapsedTime: 65.5 seconds

RetCode: 0

Status:  OK

CheckDir: GSVAdata.Rcheck

Warnings: 0

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### Running command:
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###   rm -rf GSVAdata.buildbin-libdir GSVAdata.Rcheck && mkdir GSVAdata.buildbin-libdir GSVAdata.Rcheck && C:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=GSVAdata.buildbin-libdir GSVAdata_1.6.0.tar.gz >GSVAdata.Rcheck\00install.out 2>&1 && cp GSVAdata.Rcheck\00install.out GSVAdata-install.out  && C:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD check --library=GSVAdata.buildbin-libdir --install="check:GSVAdata-install.out" --force-multiarch --no-vignettes --timings GSVAdata_1.6.0.tar.gz
###
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* using log directory 'C:/biocbld/bbs-3.2-data-experiment/meat/GSVAdata.Rcheck'
* using R version 3.2.2 Patched (2015-08-16 r69094)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'GSVAdata/DESCRIPTION' ... OK
* this is package 'GSVAdata' version '1.6.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'GSVAdata' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 12.8Mb
  sub-directories of 1Mb or more:
    data  12.7Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ...
** running examples for arch 'i386' ... [7s] OK
** running examples for arch 'x64' ... [7s] OK
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  'C:/biocbld/bbs-3.2-data-experiment/meat/GSVAdata.Rcheck/00check.log'
for details.

install for i386

* installing *source* package 'GSVAdata' ...
** data
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

install for x64

* installing *source* package 'GSVAdata' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GSVAdata' as GSVAdata_1.6.0.zip
* DONE (GSVAdata)

name	user	system	elapsed
annotEntrez220212	0.05	0.00	0.05
brainTxDbSets	0.00	0.01	0.01
c2BroadSets	2.03	0.07	2.10
commonPickrellHuang	0.45	0.05	0.50
gbm_VerhaakEtAl	0.63	0.00	0.63
genderGenesEntrez	0	0	0
leukemia	0.31	0.00	0.31

name	user	system	elapsed
annotEntrez220212	0.06	0.00	0.06
brainTxDbSets	0	0	0
c2BroadSets	1.99	0.16	2.15
commonPickrellHuang	0.59	0.02	0.60
gbm_VerhaakEtAl	0.36	0.03	0.40
genderGenesEntrez	0.01	0.00	0.01
leukemia	0.29	0.01	0.30