BioC experimental data: CHECK report for CopyNumber450kData on moscato1

Package: CopyNumber450kData

Version: 1.6.0

Command: rm -rf CopyNumber450kData.buildbin-libdir CopyNumber450kData.Rcheck && mkdir CopyNumber450kData.buildbin-libdir CopyNumber450kData.Rcheck && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=CopyNumber450kData.buildbin-libdir CopyNumber450kData_1.6.0.tar.gz >CopyNumber450kData.Rcheck\00install.out 2>&1 && cp CopyNumber450kData.Rcheck\00install.out CopyNumber450kData-install.out && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD check --library=CopyNumber450kData.buildbin-libdir --install="check:CopyNumber450kData-install.out" --force-multiarch --no-vignettes --timings CopyNumber450kData_1.6.0.tar.gz

StartedAt: 2016-04-20 13:00:04 -0700 (Wed, 20 Apr 2016)

EndedAt: 2016-04-20 13:22:18 -0700 (Wed, 20 Apr 2016)

EllapsedTime: 1334.2 seconds

RetCode: 0

Status:  OK

CheckDir: CopyNumber450kData.Rcheck

Warnings: 0

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### Running command:
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###   rm -rf CopyNumber450kData.buildbin-libdir CopyNumber450kData.Rcheck && mkdir CopyNumber450kData.buildbin-libdir CopyNumber450kData.Rcheck && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=CopyNumber450kData.buildbin-libdir CopyNumber450kData_1.6.0.tar.gz >CopyNumber450kData.Rcheck\00install.out 2>&1 && cp CopyNumber450kData.Rcheck\00install.out CopyNumber450kData-install.out  && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD check --library=CopyNumber450kData.buildbin-libdir --install="check:CopyNumber450kData-install.out" --force-multiarch --no-vignettes --timings CopyNumber450kData_1.6.0.tar.gz
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* using log directory 'D:/biocbld/bbs-3.2-data-experiment/meat/CopyNumber450kData.Rcheck'
* using R version 3.2.4 (2016-03-10)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'CopyNumber450kData/DESCRIPTION' ... OK
* this is package 'CopyNumber450kData' version '1.6.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'CopyNumber450kData' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 152.3Mb
  sub-directories of 1Mb or more:
    data  152.2Mb
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... [17s] OK
Examples with CPU or elapsed time > 5s
               user system elapsed
RGcontrolSetEx 5.18   0.36    5.53
** running examples for arch 'x64' ... [18s] OK
Examples with CPU or elapsed time > 5s
               user system elapsed
RGcontrolSetEx 5.76   0.31    6.06
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  'D:/biocbld/bbs-3.2-data-experiment/meat/CopyNumber450kData.Rcheck/00check.log'
for details.

install for i386

* installing *source* package 'CopyNumber450kData' ...
** data
*** moving datasets to lazyload DB
** inst
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'CopyNumber450kData' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CopyNumber450kData' as CopyNumber450kData_1.6.0.zip
* DONE (CopyNumber450kData)

name	user	system	elapsed
RGcontrolSetEx	5.18	0.36	5.53

name	user	system	elapsed
RGcontrolSetEx	5.76	0.31	6.06