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BioC 3.2: INSTALL report for SomaticSignatures on moscato1

This page was generated on 2015-08-20 13:22:22 -0700 (Thu, 20 Aug 2015).

Package 965/1069HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SomaticSignatures 2.5.6
Julian Gehring
Snapshot Date: 2015-08-19 16:24:33 -0700 (Wed, 19 Aug 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/SomaticSignatures
Last Changed Rev: 106993 / Revision: 107602
Last Changed Date: 2015-08-03 02:30:58 -0700 (Mon, 03 Aug 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: SomaticSignatures
Version: 2.5.6
Command: C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.2/bioc/src/contrib/SomaticSignatures_2.5.6.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch SomaticSignatures_2.5.6.tar.gz && rm SomaticSignatures_2.5.6.tar.gz
StartedAt: 2015-08-19 18:57:07 -0700 (Wed, 19 Aug 2015)
EndedAt: 2015-08-19 18:59:39 -0700 (Wed, 19 Aug 2015)
EllapsedTime: 151.7 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.2/bioc/src/contrib/SomaticSignatures_2.5.6.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch SomaticSignatures_2.5.6.tar.gz && rm SomaticSignatures_2.5.6.tar.gz
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  104k  100  104k    0     0  7078k      0 --:--:-- --:--:-- --:--:-- 12.7M

install for i386

* installing to library 'D:/biocbld/bbs-3.2-bioc/R/library'
* installing *source* package 'SomaticSignatures' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Note: the specification for S3 class "cluster" in package 'NMF' seems equivalent to one from package 'BiocParallel': not turning on duplicate class definitions for this class.
** help
*** installing help indices
** building package indices
** installing vignettes
   'SomaticSignatures-vignette.Rhtml' 
** testing if installed package can be loaded
Note: the specification for S3 class "cluster" in package 'NMF' seems equivalent to one from package 'BiocParallel': not turning on duplicate class definitions for this class.

install for x64

* installing to library 'D:/biocbld/bbs-3.2-bioc/R/library'
* installing *source* package 'SomaticSignatures' ...
** testing if installed package can be loaded
Note: the specification for S3 class "cluster" in package 'NMF' seems equivalent to one from package 'BiocParallel': not turning on duplicate class definitions for this class.
* DONE (SomaticSignatures)