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BioC 3.2: INSTALL report for GOSemSim on perceval

This page was generated on 2015-10-27 17:33:53 -0400 (Tue, 27 Oct 2015).

Package 450/1104HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GOSemSim 1.28.1
Guangchuang Yu
Snapshot Date: 2015-10-26 19:24:07 -0400 (Mon, 26 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/GOSemSim
Last Changed Rev: 109768 / Revision: 109947
Last Changed Date: 2015-10-19 21:12:27 -0400 (Mon, 19 Oct 2015)
linux1.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
windows1.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: GOSemSim
Version: 1.28.1
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL GOSemSim
StartedAt: 2015-10-26 20:12:02 -0400 (Mon, 26 Oct 2015)
EndedAt: 2015-10-26 20:12:18 -0400 (Mon, 26 Oct 2015)
EllapsedTime: 15.8 seconds
RetCode: 0
Status:  OK 

Command output

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###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL GOSemSim
###
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* installing to library ‘/Library/Frameworks/R.framework/Versions/3.2/Resources/library’
* installing *source* package ‘GOSemSim’ ...
** libs
llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/3.2/Resources/library/Rcpp/include"   -fPIC  -mtune=core2 -g -O2 -Wall  -c ICmethod.cpp -o ICmethod.o
ICmethod.cpp: In function ‘Rcpp::NumericMatrix infoContentMethod_cpp(Rcpp::StringVector&, Rcpp::StringVector&, Rcpp::List&, Rcpp::NumericVector&, const std::string&, const std::string&)’:
ICmethod.cpp:82: warning: comparison between signed and unsigned integer expressions
ICmethod.cpp:88: warning: comparison between signed and unsigned integer expressions
ICmethod.cpp:107: warning: comparison between signed and unsigned integer expressions
ICmethod.cpp:118: warning: comparison between signed and unsigned integer expressions
ICmethod.cpp:125: warning: comparison between signed and unsigned integer expressions
ICmethod.cpp:152: warning: comparison between signed and unsigned integer expressions
llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/3.2/Resources/library/Rcpp/include"   -fPIC  -mtune=core2 -g -O2 -Wall  -c RcppExports.cpp -o RcppExports.o
llvm-g++-4.2 -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -L/usr/local/lib -o GOSemSim.so ICmethod.o RcppExports.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.2/Resources/library/GOSemSim/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (GOSemSim)