Back to the "Multiple platform build/check report" A [B] C  D  E  F  G  H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.2: BUILD BIN report for BBCAnalyzer on perceval

This page was generated on 2015-10-10 13:36:50 -0400 (Sat, 10 Oct 2015).

Package 77/1101HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BBCAnalyzer 0.99.4
Sarah Sandmann
Snapshot Date: 2015-10-09 19:24:07 -0400 (Fri, 09 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/BBCAnalyzer
Last Changed Rev: 107391 / Revision: 109459
Last Changed Date: 2015-08-13 17:21:16 -0400 (Thu, 13 Aug 2015)
linux1.bioconductor.org Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
windows1.bioconductor.org Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK  OK [ ERROR ]
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: BBCAnalyzer
Version: 0.99.4
Command: rm -rf BBCAnalyzer.buildbin-libdir && mkdir BBCAnalyzer.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh BBCAnalyzer_0.99.4.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R BBCAnalyzer.buildbin-libdir
StartedAt: 2015-10-10 11:26:51 -0400 (Sat, 10 Oct 2015)
EndedAt: 2015-10-10 11:27:38 -0400 (Sat, 10 Oct 2015)
EllapsedTime: 47.1 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf BBCAnalyzer.buildbin-libdir && mkdir BBCAnalyzer.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh BBCAnalyzer_0.99.4.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R BBCAnalyzer.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=BBCAnalyzer.buildbin-libdir BBCAnalyzer_0.99.4.tar.gz'
>>>>>>> 

* installing *source* package ‘BBCAnalyzer’ ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (BBCAnalyzer)


Installation problem: before you can use the /Users/biocbuild/BBS/utils/macosx-make-tgz.sh script, you must
install chown-rootadmin in the same directory as /Users/biocbuild/BBS/utils/macosx-make-tgz.sh like this:
  cd /Users/biocbuild/BBS/utils
  gcc chown-rootadmin.c -o chown-rootadmin
  sudo chown root:admin chown-rootadmin
  sudo chmod 4750 chown-rootadmin