| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:07:19 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the scRepertoire package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to [email protected]:packages/scRepertoire.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1743/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| scRepertoire 1.4.0 (landing page) Nick Borcherding
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: scRepertoire |
| Version: 1.4.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/scRepertoire_1.4.0.tar.gz && rm -rf scRepertoire.buildbin-libdir && mkdir scRepertoire.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scRepertoire.buildbin-libdir scRepertoire_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL scRepertoire_1.4.0.zip && rm scRepertoire_1.4.0.tar.gz scRepertoire_1.4.0.zip |
| StartedAt: 2022-04-12 06:35:07 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:37:31 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 143.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/scRepertoire_1.4.0.tar.gz && rm -rf scRepertoire.buildbin-libdir && mkdir scRepertoire.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=scRepertoire.buildbin-libdir scRepertoire_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL scRepertoire_1.4.0.zip && rm scRepertoire_1.4.0.tar.gz scRepertoire_1.4.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
28 3765k 28 1090k 0 0 1216k 0 0:00:03 --:--:-- 0:00:03 1216k
85 3765k 85 3215k 0 0 1699k 0 0:00:02 0:00:01 0:00:01 1699k
100 3765k 100 3765k 0 0 1811k 0 0:00:02 0:00:02 --:--:-- 1812k
install for i386
* installing *source* package 'scRepertoire' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'scRepertoire'
finding HTML links ... done
Startrac html
Startrac.run html
StartracDiversity html
StartracOut html
abundanceContig html
addVariable html
alluvialClonotypes html
calIndex html
clonalDiversity html
clonalHomeostasis html
clonalOverlap html
clonalOverlay html
clonalProportion html
clonesizeDistribution html
clusterTCR html
combineBCR html
combineExpression html
combineTCR html
compareClonotypes html
contig_list html
expression2List html
getCirclize html
getSig html
highlightClonotypes html
initialize-StartracOut-method html
initialize-methods html
lengthContig html
loginfo html
mcol.entropy html
mrow.entropy html
occupiedscRepertoire html
pIndex html
quantContig html
screp_example html
show-StartracOut-method html
show html
stripBarcode html
subsetContig html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'scRepertoire' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'scRepertoire' as scRepertoire_1.4.0.zip
* DONE (scRepertoire)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'scRepertoire' successfully unpacked and MD5 sums checked