Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:07:08 -0400 (Wed, 13 Apr 2022).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the pwOmics package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to [email protected]:packages/pwOmics.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1492/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
pwOmics 1.26.0 (landing page) Maren Sitte
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |||||||||
Package: pwOmics |
Version: 1.26.0 |
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/pwOmics_1.26.0.tar.gz && rm -rf pwOmics.buildbin-libdir && mkdir pwOmics.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pwOmics.buildbin-libdir pwOmics_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL pwOmics_1.26.0.zip && rm pwOmics_1.26.0.tar.gz pwOmics_1.26.0.zip |
StartedAt: 2022-04-12 05:23:04 -0400 (Tue, 12 Apr 2022) |
EndedAt: 2022-04-12 05:25:54 -0400 (Tue, 12 Apr 2022) |
EllapsedTime: 169.7 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/pwOmics_1.26.0.tar.gz && rm -rf pwOmics.buildbin-libdir && mkdir pwOmics.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pwOmics.buildbin-libdir pwOmics_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL pwOmics_1.26.0.zip && rm pwOmics_1.26.0.tar.gz pwOmics_1.26.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 20 892k 20 187k 0 0 498k 0 0:00:01 --:--:-- 0:00:01 498k 100 892k 100 892k 0 0 855k 0 0:00:01 0:00:01 --:--:-- 855k install for i386 * installing *source* package 'pwOmics' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'pwOmics' finding HTML links ... done OmicsExampleData html PWidentallprots html PWidentallprotssub html PWidenttps html SteinerTree_cons html TFidentallgenes html TFidenttps html addFeedbackLoops html clusterTimeProfiles html consDynamicNet html createBiopaxnew html createIntIDs html findSignalingAxes html findxneighborsoverlap html findxnextneighbors html genGenelists html genGenelistssub html genIntIDs html generate_DSSignalingBase html genfullConsensusGraph html getAlias_Ensemble html getAliasfromSTRINGIDs html getBiopaxModel html getConsensusSTRINGIDs html getDS_PWs html getDS_TFs html getDS_TGs html getFCsplines html getGenesIntersection html getOmicsDataset html getOmicsTimepoints html getOmicsallGeneIDs html getOmicsallProteinIDs html getProteinIntersection html getSTRING_graph html getTFIntersection html getUS_PWs html getUS_TFs html getUS_regulators html get_matching_transcripts html getbipartitegraphInfo html gettpIntersection html identPWsofTFs html identRegulators html identTFTGsinPWs html identTFs html identifyPR html identifyPWTFTGs html identifyPWs html identifyRsofTFs html identifyTFs html infoConsensusGraph html loadGenelists html loadPWs html plotConsDynNet html plotConsensusGraph html plotConsensusProfiles html plotTimeProfileClusters html predictFCvals html preparePWinfo html print.OmicsData html pwIntOmics-package html readOmics html readPWdata html readPhosphodata html readTFdata html readTFtargets html selectPWsofTFs html staticConsensusNet html temp_correlations html ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'pwOmics' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'pwOmics' as pwOmics_1.26.0.zip * DONE (pwOmics) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'pwOmics' successfully unpacked and MD5 sums checked