Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:06:33 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

CHECK results for flowFP on tokay2


To the developers/maintainers of the flowFP package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to [email protected]:packages/flowFP.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 661/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
flowFP 1.52.0  (landing page)
Herb Holyst
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/flowFP
git_branch: RELEASE_3_14
git_last_commit: 5e0174a
git_last_commit_date: 2021-10-26 11:54:08 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: flowFP
Version: 1.52.0
Command: C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:flowFP.install-out.txt --library=C:\Users\biocbuild\bbs-3.14-bioc\R\library --no-vignettes --timings flowFP_1.52.0.tar.gz
StartedAt: 2022-04-12 19:44:57 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 19:49:18 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 261.5 seconds
RetCode: 0
Status:   OK  
CheckDir: flowFP.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:flowFP.install-out.txt --library=C:\Users\biocbuild\bbs-3.14-bioc\R\library --no-vignettes --timings flowFP_1.52.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory 'C:/Users/biocbuild/bbs-3.14-bioc/meat/flowFP.Rcheck'
* using R version 4.1.3 (2022-03-10)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'flowFP/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'flowFP' version '1.52.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'flowFP' can be installed ... OK
* checking installed package size ... NOTE
  installed size is  5.2Mb
  sub-directories of 1Mb or more:
    data   4.3Mb
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
flowFP: no visible global function definition for 'identifier'
flowFPModel: no visible global function definition for 'median'
flowFPModel: no visible global function definition for 'fsApply'
flowFPModel: no visible global function definition for 'identifier'
initFPplot: no visible global function definition for 'legend'
plotGridFP: no visible global function definition for 'legend'
plotStackFP: no visible global function definition for 'legend'
plotStackFP: no visible global function definition for 'axis'
Undefined global functions or variables:
  axis fsApply identifier legend median
Consider adding
  importFrom("graphics", "axis", "legend")
  importFrom("stats", "median")
to your NAMESPACE file.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in shell scripts ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking include directives in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files for i386 is not available
Note: information on .o files for x64 is not available
File 'C:/Users/biocbuild/bbs-3.14-bioc/R/library/flowFP/libs/i386/flowFP.dll':
  Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
File 'C:/Users/biocbuild/bbs-3.14-bioc/R/library/flowFP/libs/x64/flowFP.dll':
  Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs. The detected symbols are linked into the code but
might come from libraries and not actually be called.

See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
flowFP 0.74   0.06    6.02
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
** running tests for arch 'i386' ...
  Running 'doRUnit.R'
 OK
** running tests for arch 'x64' ...
  Running 'doRUnit.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 3 NOTEs
See
  'C:/Users/biocbuild/bbs-3.14-bioc/meat/flowFP.Rcheck/00check.log'
for details.



Installation output

flowFP.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/flowFP_1.52.0.tar.gz && rm -rf flowFP.buildbin-libdir && mkdir flowFP.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=flowFP.buildbin-libdir flowFP_1.52.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL flowFP_1.52.0.zip && rm flowFP_1.52.0.tar.gz flowFP_1.52.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  3 4457k    3  146k    0     0   638k      0  0:00:06 --:--:--  0:00:06  640k
 42 4457k   42 1908k    0     0  1532k      0  0:00:02  0:00:01  0:00:01 1533k
100 4457k  100 4457k    0     0  2050k      0  0:00:02  0:00:02 --:--:-- 2051k

install for i386

* installing *source* package 'flowFP' ...
** using staged installation

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c flowFP.c -o flowFP.o
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c init.c -o init.o
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c split_utils.c -o split_utils.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o flowFP.dll tmp.def flowFP.o init.o split_utils.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/flowFP.buildbin-libdir/00LOCK-flowFP/00new/flowFP/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for 'append' from package 'base' in package 'flowFP'
** help
*** installing help indices
  converting help for package 'flowFP'
    finding HTML links ... done
    append-methods                          html  
    binBoundary-methods                     html  
    counts-methods                          html  
    flowFP-class                            html  
    flowFP-package                          html  
    flowFP                                  html  
    flowFPModel-class                       html  
    flowFPModel                             html  
    flowFPPlex-class                        html  
    flowFPPlex                              html  
    fs1                                     html  
    fs2                                     html  
    hasClasses-methods                      html  
    index-methods                           html  
    is.flowFP                               html  
    is.flowFPModel                          html  
    is.flowFPPlex                           html  
    length-methods                          html  
    nFeatures-methods                       html  
    nInstances-methods                      html  
    nRecursions-methods                     html  
    name-methods                            html  
    parameters-methods                      html  
    plate                                   html  
    plot-methods                            html  
    sampleClasses-methods                   html  
    sampleNames-methods                     html  
    show-methods                            html  
    summary-methods                         html  
    tags-methods                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'flowFP' ...

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c flowFP.c -o flowFP.o
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c init.c -o init.o
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c split_utils.c -o split_utils.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o flowFP.dll tmp.def flowFP.o init.o split_utils.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/flowFP.buildbin-libdir/flowFP/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'flowFP' as flowFP_1.52.0.zip
* DONE (flowFP)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'flowFP' successfully unpacked and MD5 sums checked

Tests output

flowFP.Rcheck/tests_i386/doRUnit.Rout


R version 4.1.3 (2022-03-10) -- "One Push-Up"
Copyright (C) 2022 The R Foundation for Statistical Computing
Platform: i386-w64-mingw32/i386 (32-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> ## unit tests will not be done if RUnit is not available
> if(require("RUnit", quietly=TRUE)) {
+  
+   ## --- Setup ---
+  
+   pkg <- "flowFP"
+   if(Sys.getenv("RCMDCHECK") == "") {
+     ## Path to unit tests for standalone running under Makefile (not R CMD check)
+     ## PKG/tests/unitTests
+     path <- file.path(getwd(), "unitTests")
+     cat("sourced", path, "\n")
+   } else {
+     ## Path to unit tests for R CMD check
+     ## PKG.Rcheck/PKG/../tests/unitTests
+     path <- system.file(package=pkg, "..", "tests", "unitTests")
+     cat("RCMDCHECK ->", path, "<-\n")
+   }
+   cat("\nRunning unit tests\n")
+   print(list(pkg=pkg, getwd=getwd(), pathToUnitTests=path))
+  
+   library(package=pkg, character.only=TRUE, verbose=FALSE)
+  
+   ## If desired, load the name space to allow testing of private functions
+   ## if (is.element(pkg, loadedNamespaces()))
+   ##     attach(loadNamespace(pkg), name=paste("namespace", pkg, sep=":"), pos=3)
+   ##
+   ## or simply call PKG:::myPrivateFunction() in tests
+  
+   ## --- Testing ---
+  
+   ## Define tests
+   testSuite <- defineTestSuite(name=paste(pkg, "unit testing"),
+                                           dirs=path)
+   ## Run
+   tests <- runTestSuite(testSuite)
+  
+   ## Default report name
+   pathReport <- file.path(path, "report")
+  
+   ## Report to stdout and text files
+   cat("------------------- UNIT TEST SUMMARY ---------------------\n\n")
+   printTextProtocol(tests, showDetails=FALSE)
+   printTextProtocol(tests, showDetails=FALSE,
+                     fileName=paste(pathReport, "Summary.txt", sep=""))
+   printTextProtocol(tests, showDetails=TRUE,
+                     fileName=paste(pathReport, ".txt", sep=""))
+  
+   ## Report to HTML file
+   printHTMLProtocol(tests, fileName=paste(pathReport, ".html", sep=""))
+  
+   ## Return stop() to cause R CMD check stop in case of
+   ##  - failures i.e. FALSE to unit tests or
+   ##  - errors i.e. R errors
+   tmp <- getErrors(tests)
+   if(tmp$nFail > 0 | tmp$nErr > 0) {
+     stop(paste("\n\nunit testing failed (#test failures: ", tmp$nFail,
+                ", #R errors: ",  tmp$nErr, ")\n\n", sep=""))
+   }
+ } else {
+   warning("cannot run unit tests -- package RUnit is not available")
+ }
sourced C:/Users/biocbuild/bbs-3.14-bioc/meat/flowFP.Rcheck/tests_i386/unitTests 

Running unit tests
$pkg
[1] "flowFP"

$getwd
[1] "C:/Users/biocbuild/bbs-3.14-bioc/meat/flowFP.Rcheck/tests_i386"

$pathToUnitTests
[1] "C:/Users/biocbuild/bbs-3.14-bioc/meat/flowFP.Rcheck/tests_i386/unitTests"

Loading required package: flowCore
Loading required package: flowViz
Loading required package: lattice


Executing test function test.FP2  ...  done successfully.



Executing test function test.Reducing_model_nRecursions  ...  done successfully.



Executing test function test.Reducing_nRecursions  ...  done successfully.



Executing test function test.fingerprint1  ...  done successfully.



Executing test function test.BadParams  ... Error : One or more 'parameters' don't match this flowSet or flowFrame.

In addition: Warning messages:
1: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :
  RNGkind: Marsaglia-Multicarry has poor statistical properties
2: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :
  RNGkind: severe deviations from normality for Kinderman-Ramage + Marsaglia-Multicarry
3: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :
  RNGkind: Marsaglia-Multicarry has poor statistical properties
4: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :
  RNGkind: severe deviations from normality for Kinderman-Ramage + Marsaglia-Multicarry
Error : 'parameters' is out of bounds for this flowSet or flowFrame.

 done successfully.



Executing test function test.CheckAutoLevel  ...  done successfully.



Executing test function test.ModelAccessors  ...  done successfully.



Executing test function test.ModelConstruction  ...  done successfully.



Executing test function test.NonFlowData  ...  done successfully.



Executing test function test.plex1  ...  done successfully.



Executing test function test.plex2  ...  done successfully.



Executing test function test.plex_append  ...  done successfully.



Executing test function test.plex_append_plex  ...  done successfully.



Executing test function test.plex_testClasses  ...  done successfully.

------------------- UNIT TEST SUMMARY ---------------------

RUNIT TEST PROTOCOL -- Tue Apr 12 19:48:32 2022 
*********************************************** 
Number of test functions: 14 
Number of errors: 0 
Number of failures: 0 

 
1 Test Suite : 
flowFP unit testing - 14 test functions, 0 errors, 0 failures
Warning messages:
1: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :
  RNGkind: Marsaglia-Multicarry has poor statistical properties
2: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :
  RNGkind: severe deviations from normality for Kinderman-Ramage + Marsaglia-Multicarry
> 
> proc.time()
   user  system elapsed 
  14.35    0.62   14.96 

flowFP.Rcheck/tests_x64/doRUnit.Rout


R version 4.1.3 (2022-03-10) -- "One Push-Up"
Copyright (C) 2022 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> ## unit tests will not be done if RUnit is not available
> if(require("RUnit", quietly=TRUE)) {
+  
+   ## --- Setup ---
+  
+   pkg <- "flowFP"
+   if(Sys.getenv("RCMDCHECK") == "") {
+     ## Path to unit tests for standalone running under Makefile (not R CMD check)
+     ## PKG/tests/unitTests
+     path <- file.path(getwd(), "unitTests")
+     cat("sourced", path, "\n")
+   } else {
+     ## Path to unit tests for R CMD check
+     ## PKG.Rcheck/PKG/../tests/unitTests
+     path <- system.file(package=pkg, "..", "tests", "unitTests")
+     cat("RCMDCHECK ->", path, "<-\n")
+   }
+   cat("\nRunning unit tests\n")
+   print(list(pkg=pkg, getwd=getwd(), pathToUnitTests=path))
+  
+   library(package=pkg, character.only=TRUE, verbose=FALSE)
+  
+   ## If desired, load the name space to allow testing of private functions
+   ## if (is.element(pkg, loadedNamespaces()))
+   ##     attach(loadNamespace(pkg), name=paste("namespace", pkg, sep=":"), pos=3)
+   ##
+   ## or simply call PKG:::myPrivateFunction() in tests
+  
+   ## --- Testing ---
+  
+   ## Define tests
+   testSuite <- defineTestSuite(name=paste(pkg, "unit testing"),
+                                           dirs=path)
+   ## Run
+   tests <- runTestSuite(testSuite)
+  
+   ## Default report name
+   pathReport <- file.path(path, "report")
+  
+   ## Report to stdout and text files
+   cat("------------------- UNIT TEST SUMMARY ---------------------\n\n")
+   printTextProtocol(tests, showDetails=FALSE)
+   printTextProtocol(tests, showDetails=FALSE,
+                     fileName=paste(pathReport, "Summary.txt", sep=""))
+   printTextProtocol(tests, showDetails=TRUE,
+                     fileName=paste(pathReport, ".txt", sep=""))
+  
+   ## Report to HTML file
+   printHTMLProtocol(tests, fileName=paste(pathReport, ".html", sep=""))
+  
+   ## Return stop() to cause R CMD check stop in case of
+   ##  - failures i.e. FALSE to unit tests or
+   ##  - errors i.e. R errors
+   tmp <- getErrors(tests)
+   if(tmp$nFail > 0 | tmp$nErr > 0) {
+     stop(paste("\n\nunit testing failed (#test failures: ", tmp$nFail,
+                ", #R errors: ",  tmp$nErr, ")\n\n", sep=""))
+   }
+ } else {
+   warning("cannot run unit tests -- package RUnit is not available")
+ }
sourced C:/Users/biocbuild/bbs-3.14-bioc/meat/flowFP.Rcheck/tests_x64/unitTests 

Running unit tests
$pkg
[1] "flowFP"

$getwd
[1] "C:/Users/biocbuild/bbs-3.14-bioc/meat/flowFP.Rcheck/tests_x64"

$pathToUnitTests
[1] "C:/Users/biocbuild/bbs-3.14-bioc/meat/flowFP.Rcheck/tests_x64/unitTests"

Loading required package: flowCore
Loading required package: flowViz
Loading required package: lattice


Executing test function test.FP2  ...  done successfully.



Executing test function test.Reducing_model_nRecursions  ...  done successfully.



Executing test function test.Reducing_nRecursions  ...  done successfully.



Executing test function test.fingerprint1  ...  done successfully.



Executing test function test.BadParams  ... Error : One or more 'parameters' don't match this flowSet or flowFrame.

In addition: Warning messages:
1: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :
  RNGkind: Marsaglia-Multicarry has poor statistical properties
2: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :
  RNGkind: severe deviations from normality for Kinderman-Ramage + Marsaglia-Multicarry
3: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :
  RNGkind: Marsaglia-Multicarry has poor statistical properties
4: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :
  RNGkind: severe deviations from normality for Kinderman-Ramage + Marsaglia-Multicarry
Error : 'parameters' is out of bounds for this flowSet or flowFrame.

 done successfully.



Executing test function test.CheckAutoLevel  ...  done successfully.



Executing test function test.ModelAccessors  ...  done successfully.



Executing test function test.ModelConstruction  ...  done successfully.



Executing test function test.NonFlowData  ...  done successfully.



Executing test function test.plex1  ...  done successfully.



Executing test function test.plex2  ...  done successfully.



Executing test function test.plex_append  ...  done successfully.



Executing test function test.plex_append_plex  ...  done successfully.



Executing test function test.plex_testClasses  ...  done successfully.

------------------- UNIT TEST SUMMARY ---------------------

RUNIT TEST PROTOCOL -- Tue Apr 12 19:48:55 2022 
*********************************************** 
Number of test functions: 14 
Number of errors: 0 
Number of failures: 0 

 
1 Test Suite : 
flowFP unit testing - 14 test functions, 0 errors, 0 failures
Warning messages:
1: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :
  RNGkind: Marsaglia-Multicarry has poor statistical properties
2: In RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) :
  RNGkind: severe deviations from normality for Kinderman-Ramage + Marsaglia-Multicarry
> 
> proc.time()
   user  system elapsed 
  13.90    1.04   21.87 

Example timings

flowFP.Rcheck/examples_i386/flowFP-Ex.timings

nameusersystemelapsed
append-methods1.780.081.86
flowFP-class0.730.060.79
flowFP-package000
flowFP0.740.066.02
flowFPModel-class1.360.021.37
flowFPModel0.840.020.86
flowFPPlex-class000
flowFPPlex1.870.091.97
fs10.240.020.25
fs20.230.000.24
is.flowFP0.960.041.00
is.flowFPModel0.750.000.75
is.flowFPPlex1.280.101.37
plate0.150.010.17

flowFP.Rcheck/examples_x64/flowFP-Ex.timings

nameusersystemelapsed
append-methods1.620.081.70
flowFP-class0.630.000.63
flowFP-package000
flowFP1.000.031.03
flowFPModel-class0.970.020.98
flowFPModel0.640.030.67
flowFPPlex-class000
flowFPPlex1.470.051.51
fs10.170.010.19
fs20.160.030.19
is.flowFP0.860.040.89
is.flowFPModel0.640.030.67
is.flowFPPlex0.630.040.67
plate0.070.000.10