Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:06:22 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for conclus on tokay2


To the developers/maintainers of the conclus package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to [email protected]:packages/conclus.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 382/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
conclus 1.2.4  (landing page)
Ilyess Rachedi
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/conclus
git_branch: RELEASE_3_14
git_last_commit: 4f3d751
git_last_commit_date: 2022-04-08 16:47:00 -0400 (Fri, 08 Apr 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    ERROR  skipped
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: conclus
Version: 1.2.4
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/conclus_1.2.4.tar.gz && rm -rf conclus.buildbin-libdir && mkdir conclus.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=conclus.buildbin-libdir conclus_1.2.4.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL conclus_1.2.4.zip && rm conclus_1.2.4.tar.gz conclus_1.2.4.zip
StartedAt: 2022-04-12 07:29:54 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 07:32:12 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 137.9 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/conclus_1.2.4.tar.gz && rm -rf conclus.buildbin-libdir && mkdir conclus.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=conclus.buildbin-libdir conclus_1.2.4.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL conclus_1.2.4.zip && rm conclus_1.2.4.tar.gz conclus_1.2.4.zip
###
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0 1448k    0  5187    0     0  62930      0  0:00:23 --:--:--  0:00:23 63256
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100 1448k  100 1448k    0     0  1255k      0  0:00:01  0:00:01 --:--:-- 1255k

install for i386

* installing *source* package 'conclus' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'conclus'
    finding HTML links ... done
    Dbscan-class                            html  
    Tsne-class                              html  
    addClustering-scRNAseq                  html  
    calculateClustersSimilarity-scRNAseq    html  
    clusterCellsInternal-scRNAseq           html  
    conclusCacheClear                       html  
    constructors                            html  
    exportResults-scRNAseq                  html  
    generateTSNECoordinates-scRNAseq        html  
    getters                                 html  
    loadDataOrMatrix                        html  
    normaliseCountMatrix-scRNAseq           html  
    plotCellHeatmap                         html  
    plotCellSimilarity-scRNAseq             html  
    plotClusteredTSNE-scRNAseq              html  
    plotClustersSimilarity                  html  
    plotGeneExpression-scRNAseq             html  
    rankGenes-scRNAseq                      html  
    retrieveFromGEO                         html  
    retrieveGenesInfo-scRNAseq              html  
    retrieveTableClustersCells-scRNAseq     html  
    retrieveTopClustersMarkers-scRNAseq     html  
    runCONCLUS                              html  
    runDBSCAN-scRNAseq                      html  
    scRNAseq-class                          html  
    setters                                 html  
    testClustering-scRNAseq                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'conclus' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'conclus' as conclus_1.2.4.zip
* DONE (conclus)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'conclus' successfully unpacked and MD5 sums checked