| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:09 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the annotate package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to [email protected]:packages/annotate.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 59/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| annotate 1.72.0 (landing page) Bioconductor Package Maintainer
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: annotate |
| Version: 1.72.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/annotate_1.72.0.tar.gz && rm -rf annotate.buildbin-libdir && mkdir annotate.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=annotate.buildbin-libdir annotate_1.72.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL annotate_1.72.0.zip && rm annotate_1.72.0.tar.gz annotate_1.72.0.zip |
| StartedAt: 2022-04-12 05:47:55 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 05:49:39 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 103.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/annotate_1.72.0.tar.gz && rm -rf annotate.buildbin-libdir && mkdir annotate.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=annotate.buildbin-libdir annotate_1.72.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL annotate_1.72.0.zip && rm annotate_1.72.0.tar.gz annotate_1.72.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
36 770k 36 277k 0 0 567k 0 0:00:01 --:--:-- 0:00:01 567k
100 770k 100 770k 0 0 823k 0 --:--:-- --:--:-- --:--:-- 823k
install for i386
* installing *source* package 'annotate' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'annotate'
finding HTML links ... done
ACCNUMStats html
GO2heatmap html
GOmnplot html
HTMLPage-class html
LL2homology html
PMIDAmat html
PWAmat html
UniGeneQuery html
accessionToUID html
annPkgName html
annotate-defunct html
aqListGOIDs html
blastSequences html
buildChromLocation html
buildPubMedAbst html
chrCats html
chromLocation-class html
compatibleVersions html
dropECode html
entrezGeneByID html
entrezGeneQuery html
filterGOByOntology html
findNeighbors html
genbank html
getAnnMap html
getEvidence html
getGOTerm html
getOntology html
getPMInfo html
getSYMBOL html
getSeq4Acc html
getTDRows html
hasGOannote html
hgByChroms html
hgCLengths html
hgu95AProbLocs html
hgu95Achroloc html
hgu95Achrom html
hgu95All html
hgu95Asym html
homoData-class html
htmlpage html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/annotate.buildbin-libdir/00LOCK-annotate/00new/annotate/help/htmlpage.html
isValidkey html
makeAnchor html
mapOrgs html
organism html
p2LL html
pm.abstGrep html
pm.getabst html
pm.titles html
pmAbst2HTML html
pmid2MIAME html
pmidQuery html
pubMedAbst-class html
pubmed html
readGEOAnn html
serializeEnv html
setRepository html
updateSymbolsToValidKeys html
usedChromGenes html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'annotate' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'annotate' as annotate_1.72.0.zip
* DONE (annotate)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'annotate' successfully unpacked and MD5 sums checked