| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:07:26 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the STRINGdb package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to [email protected]:packages/STRINGdb.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1892/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| STRINGdb 2.6.5 (landing page) Damian Szklarczyk
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: STRINGdb |
| Version: 2.6.5 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/STRINGdb_2.6.5.tar.gz && rm -rf STRINGdb.buildbin-libdir && mkdir STRINGdb.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=STRINGdb.buildbin-libdir STRINGdb_2.6.5.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL STRINGdb_2.6.5.zip && rm STRINGdb_2.6.5.tar.gz STRINGdb_2.6.5.zip |
| StartedAt: 2022-04-12 04:33:39 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 04:35:19 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 100.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/STRINGdb_2.6.5.tar.gz && rm -rf STRINGdb.buildbin-libdir && mkdir STRINGdb.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=STRINGdb.buildbin-libdir STRINGdb_2.6.5.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL STRINGdb_2.6.5.zip && rm STRINGdb_2.6.5.tar.gz STRINGdb_2.6.5.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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install for i386
* installing *source* package 'STRINGdb' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'STRINGdb'
finding HTML links ... done
STRINGdb-class html
add_diff_exp_color html
add_proteins_description html
coeffOfvar html
delColDf html
diff_exp_example1 html
downloadAbsentFile html
downloadAbsentFileSTRING html
get_aliases html
get_annotations html
get_annotations_desc html
get_bioc_graph html
get_clusters html
get_enrichment html
get_graph html
get_homologs_besthits html
get_interactions html
get_link html
get_neighbors html
get_paralogs html
get_png html
get_ppi_enrichment html
get_proteins html
get_subnetwork html
get_summary html
get_term_proteins html
interactions html
load html
load_all html
map html
mp html
multi_map_df html
plot_network html
post_payload html
remove_homologous_interactions html
renameColDf html
set_background html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'STRINGdb' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'STRINGdb' as STRINGdb_2.6.5.zip
* DONE (STRINGdb)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'STRINGdb' successfully unpacked and MD5 sums checked