Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-03-11 13:06:33 -0500 (Fri, 11 Mar 2022).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.2 (2021-11-01) -- "Bird Hippie" | 4335 |
tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.2 (2021-11-01) -- "Bird Hippie" | 4087 |
machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.2 (2021-11-01) -- "Bird Hippie" | 4148 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the EventPointer package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to [email protected]:packages/EventPointer.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 609/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
EventPointer 3.2.0 (landing page) Juan A. Ferrer-Bonsoms
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: EventPointer |
Version: 3.2.0 |
Command: rm -rf EventPointer.buildbin-libdir && mkdir EventPointer.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EventPointer.buildbin-libdir EventPointer_3.2.0.tar.gz |
StartedAt: 2022-03-11 06:03:39 -0500 (Fri, 11 Mar 2022) |
EndedAt: 2022-03-11 06:05:18 -0500 (Fri, 11 Mar 2022) |
EllapsedTime: 99.0 seconds |
RetCode: 0 |
Status: OK |
PackageFile: EventPointer_3.2.0.zip |
PackageFileSize: 1.372 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf EventPointer.buildbin-libdir && mkdir EventPointer.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EventPointer.buildbin-libdir EventPointer_3.2.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'EventPointer' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c dgl.c -o dgl.o "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c params.c -o params.o "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c pgl.c -o pgl.o "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c qdgl.c -o qdgl.o "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c qgl.c -o qgl.o "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c rgl.c -o rgl.o C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o EventPointer.dll tmp.def dgl.o params.o pgl.o qdgl.o qgl.o rgl.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/EventPointer.buildbin-libdir/00LOCK-EventPointer/00new/EventPointer/libs/i386 ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'EventPointer' finding HTML links ... done AllEvents_RNASeq html AllEvents_RNASeq_MP html ArrayDatamultipath html ArraysData html CDFfromGTF html CDFfromGTF_Multipath html CreateExSmatrix html EventDetection html EventDetectionMultipath html EventDetection_transcriptome html EventPointer html EventPointer_Bootstraps html EventPointer_IGV html EventPointer_RNASeq html EventPointer_RNASeq_IGV html EventPointer_RNASeq_TranRef html EventPointer_RNASeq_TranRef_IGV html EventXtrans html FindPrimers html Fit html GetPSI_FromTranRef html InternalFunctions html MyPrimers html MyPrimers_taqman html PSI_Statistic html PSIss html PrepareBam_EP html Protein_Domain_Enrichment html ResulTable html SF_Prediction html SG_RNASeq html TxD html getbootstrapdata html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'EventPointer' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c dgl.c -o dgl.o "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c params.c -o params.o "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c pgl.c -o pgl.o "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c qdgl.c -o qdgl.o "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c qgl.c -o qgl.o "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c rgl.c -o rgl.o C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o EventPointer.dll tmp.def dgl.o params.o pgl.o qdgl.o qgl.o rgl.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/EventPointer.buildbin-libdir/EventPointer/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'EventPointer' as EventPointer_3.2.0.zip * DONE (EventPointer)