| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:06:24 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the CRISPRseek package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to [email protected]:packages/CRISPRseek.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 416/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| CRISPRseek 1.34.2 (landing page) Lihua Julie Zhu
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | ERROR | OK | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: CRISPRseek |
| Version: 1.34.2 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/CRISPRseek_1.34.2.tar.gz && rm -rf CRISPRseek.buildbin-libdir && mkdir CRISPRseek.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CRISPRseek.buildbin-libdir CRISPRseek_1.34.2.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL CRISPRseek_1.34.2.zip && rm CRISPRseek_1.34.2.tar.gz CRISPRseek_1.34.2.zip |
| StartedAt: 2022-04-12 06:37:53 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:41:14 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 201.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/CRISPRseek_1.34.2.tar.gz && rm -rf CRISPRseek.buildbin-libdir && mkdir CRISPRseek.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CRISPRseek.buildbin-libdir CRISPRseek_1.34.2.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL CRISPRseek_1.34.2.zip && rm CRISPRseek_1.34.2.tar.gz CRISPRseek_1.34.2.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
0 10.5M 0 44358 0 0 281k 0 0:00:38 --:--:-- 0:00:38 281k
18 10.5M 18 2045k 0 0 1777k 0 0:00:06 0:00:01 0:00:05 1777k
46 10.5M 46 4976k 0 0 2322k 0 0:00:04 0:00:02 0:00:02 2322k
81 10.5M 81 8823k 0 0 2813k 0 0:00:03 0:00:03 --:--:-- 2813k
100 10.5M 100 10.5M 0 0 3016k 0 0:00:03 0:00:03 --:--:-- 3016k
install for i386
* installing *source* package 'CRISPRseek' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'CRISPRseek'
finding HTML links ... done
CRISPRseek-package html
annotateOffTargets html
buildFeatureVectorForScoring html
calculategRNAEfficiency html
compare2Sequences html
deepCpf1 html
filterOffTarget html
filtergRNAs html
findgRNAs html
getOfftargetScore html
isPatternUnique html
offTargetAnalysis html
offTargetAnalysisWithoutBSgenome html
predictRelativeFreqIndels html
searchHits html
searchHits2 html
translatePattern html
uniqueREs html
writeHits html
writeHits2 html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'CRISPRseek' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CRISPRseek' as CRISPRseek_1.34.2.zip
* DONE (CRISPRseek)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'CRISPRseek' successfully unpacked and MD5 sums checked