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Package 28/98HostnameOS / ArchBUILDCHECKBUILD BIN
encoDnaseI 0.1.7
VJ Carey
Snapshot Date: 2011-07-01 11:15:06 -0700 (Fri, 01 Jul 2011)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/encoDnaseI
Last Changed Rev: 1520 / Revision: 1675
Last Changed Date: 2011-04-07 21:24:31 -0700 (Thu, 07 Apr 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  WARNINGS 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  WARNINGS  OK 
petty Mac OS X Snow Leopard (10.6.7) / i386  OK  WARNINGS [ OK ]

Summary

Package: encoDnaseI
Version: 0.1.7
Command: mkdir encoDnaseI.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh encoDnaseI_0.1.7.tar.gz /Library/Frameworks/R.framework/Versions/2.14/Resources/bin/R encoDnaseI.buildbin-libdir
StartedAt: 2011-07-01 13:12:17 -0700 (Fri, 01 Jul 2011)
EndedAt: 2011-07-01 13:13:06 -0700 (Fri, 01 Jul 2011)
EllapsedTime: 48.9 seconds
RetCode: 0
Status:  OK 
PackageFile: encoDnaseI_0.1.7.tgz
PackageFileSize: 7.982 MiB

Command output

>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --library=encoDnaseI.buildbin-libdir encoDnaseI_0.1.7.tar.gz'
>>>>>>> 

* installing *source* package 'encoDnaseI' ...
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.

Loading required package: GGBase
Loading required package: snpStats
Loading required package: survival
Loading required package: splines
Loading required package: Matrix

Attaching package: 'Matrix'

The following object(s) are masked from 'package:base':

    det

Loading required package: RSQLite
Loading required package: DBI
Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: IRanges

Attaching package: 'IRanges'

The following object(s) are masked from 'package:Biobase':

    updateObject

The following object(s) are masked from 'package:base':

    Map, cbind, eval, intersect, mapply, order, paste, pmax, pmax.int,
    pmin, pmin.int, rbind, rep.int, setdiff, table, union

Loading required package: rtracklayer
Loading required package: RCurl
Loading required package: bitops
Loading required package: org.Hs.eg.db

Loading required package: GenomicRanges
Warning: 'DESCRIPTION' file has 'Encoding' field and re-encoding is not possible
Loading package bit1.1-7

package:bit (c) 2008/2009 Jens Oehlschlaegel (GPL-2)

creators: bit bitwhich

coercion: as.logical as.integer as.bit as.bitwhich which

operator: ! & | xor != == 

querying: print length any all min max range sum summary

bit access: length<- [ [<- [[ [[<-

for more help type ?bit

Warning: 'DESCRIPTION' file has 'Encoding' field and re-encoding is not possible
Loading package ff2.2-2
- getOption("fftempdir")=="/tmp/RtmpvDWkoe"

- getOption("ffextension")=="ff"

- getOption("ffdrop")==TRUE

- getOption("fffinonexit")==TRUE

- getOption("ffpagesize")==65536

- getOption("ffcaching")=="mmnoflush"  -- consider "ffeachflush" if your system stalls on large writes

- getOption("ffbatchbytes")==16777216 -- consider a different value for tuning your system

- getOption("ffmaxbytes")==536870912 -- consider a different value for tuning your system


Attaching package: 'GGtools'

The following object(s) are masked from 'package:Biobase':

    geneNames

** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'dnaseUse.Rnw' 
** testing if installed package can be loaded
Warning messages:
1: 'DESCRIPTION' file has 'Encoding' field and re-encoding is not possible 
2: 'DESCRIPTION' file has 'Encoding' field and re-encoding is not possible 

* DONE (encoDnaseI)