affydata 1.11.11 Harris Jaffee
Snapshot Date: 2011-07-06 11:15:18 -0700 (Wed, 06 Jul 2011) | URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/affydata | Last Changed Rev: 1455 / Revision: 1678 | Last Changed Date: 2011-03-15 08:05:02 -0700 (Tue, 15 Mar 2011) |
| wilson2 | Linux (openSUSE 11.4) / x86_64 | OK | OK | |
liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ OK ] | OK |
pitt | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
* using log directory 'E:/biocbld/bbs-2.9-data-experiment/meat/affydata.Rcheck'
* using R version 2.14.0 Under development (unstable) (2011-06-03 r56036)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'affydata/DESCRIPTION' ... OK
* this is package 'affydata' version '1.11.11'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'affydata' can be installed ... OK
* checking installed package size ... NOTE
installed size is 23.4Mb
sub-directories of 1Mb or more:
celfiles 16.2Mb
data 4.4Mb
extracelfiles 2.7Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... NONE
* checking for unstated dependencies in vignettes ... NOTE
'::' or ':::' import not declared from: 'Biobase'
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK
* installing *source* package 'affydata' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'browseVignettes()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation("pkgname")'.
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
'affydata.Rnw'
** testing if installed package can be loaded
Package LibPath
[1,] "affydata" "E:/biocbld/bbs-2.9-data-experiment/meat/affydata.Rcheck"
Item Title
[1,] "Dilution" "AffyBatch instance Dilution"
* DONE (affydata)