Back to the "Multiple platform build/check report"

Package 62/65HostnameOS / ArchBUILDCHECKBUILD BIN
XhybCasneuf 1.0.4
Tineke Casneuf
Snapshot Date: 2009-08-10 00:27:00 -0700 (Mon, 10 Aug 2009)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/XhybCasneuf
Last Changed Rev: 821 / Revision: 938
Last Changed Date: 2009-06-18 14:38:01 -0700 (Thu, 18 Jun 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.7) / i386  OK [ OK ] OK 
Package: XhybCasneuf
Version: 1.0.4
Command: /Library/Frameworks/R.framework/Versions/2.9/Resources/bin/R CMD check --no-vignettes XhybCasneuf_1.0.4.tar.gz
StartedAt: 2009-08-10 01:59:14 -0700 (Mon, 10 Aug 2009)
EndedAt: 2009-08-10 02:00:37 -0700 (Mon, 10 Aug 2009)
EllapsedTime: 82.5 seconds
RetCode: 0
Status: OK
CheckDir: XhybCasneuf.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/Users/biocbuild/bbs-2.4-data-experiment/meat/XhybCasneuf.Rcheck'
* using R version 2.9.1 Patched (2009-06-28 r48863)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'XhybCasneuf/DESCRIPTION' ... OK
* this is package 'XhybCasneuf' version '1.0.4'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'XhybCasneuf' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd files against version 2 parser ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

XhybCasneuf.Rcheck/00install.out:

* Installing *source* package 'XhybCasneuf' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.


Attaching package: 'tinesath1cdf'


	The following object(s) are masked from package:ath1121501cdf :

	 i2xy,
	 xy2i 

** help
*** installing help indices
 >>> Building/Updating help pages for package 'XhybCasneuf'
     Formats: text html latex example 
  AffysTissue                       text    html    latex   example
  CustomsTissue                     text    html    latex   example
  XhybExamples-class                text    html    latex   example
  ex1                               text    html    latex   example
  runSimulation                     text    html    latex   example
** building package indices ...
* DONE (XhybCasneuf)