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BioC 2.12: BUILD BIN report for spade on moscato2

This page was generated on 2013-10-09 09:39:03 -0700 (Wed, 09 Oct 2013).

Package 609/671HostnameOS / ArchBUILDCHECKBUILD BIN
spade 1.8.0
Michael Linderman
Snapshot Date: 2013-10-08 17:00:48 -0700 (Tue, 08 Oct 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_12/madman/Rpacks/spade
Last Changed Rev: 75263 / Revision: 81334
Last Changed Date: 2013-04-03 14:32:27 -0700 (Wed, 03 Apr 2013)
george2 Linux (Ubuntu 12.04.1 LTS) / x86_64  OK  OK 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK [ OK ]
petty Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK 

Summary

Package: spade
Version: 1.8.0
Command: rm -rf spade.buildbin-libdir && mkdir spade.buildbin-libdir && E:\biocbld\bbs-2.12-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=spade.buildbin-libdir spade_1.8.0.tar.gz
StartedAt: 2013-10-09 05:30:47 -0700 (Wed, 09 Oct 2013)
EndedAt: 2013-10-09 05:31:30 -0700 (Wed, 09 Oct 2013)
EllapsedTime: 43.4 seconds
RetCode: 0
Status:  OK  
PackageFile: spade_1.8.0.zip
PackageFileSize: 2.326 MiB

Command output


install for i386

* installing *source* package 'spade' ...

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
g++ -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c cluster.cc -o cluster.o
g++ -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c downsample.cc -o downsample.o
g++ -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c spade.cc -o spade.o
spade.cc: In function 'void R_init_spade(DllInfo*)':
spade.cc:8:31: warning: unused variable '_CallFun' [-Wunused-variable]
g++ -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c upsample.cc -o upsample.o
g++ -m32 -shared -s -static-libgcc -o spade.dll tmp.def cluster.o downsample.o spade.o upsample.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/i386 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LE:/biocbld/BBS-2˜1.12-/R/bin/i386 -lR
installing to E:/biocbld/bbs-2.12-bioc/meat/spade.buildbin-libdir/spade/libs/i386
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'spade' ...

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
g++ -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c cluster.cc -o cluster.o
g++ -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c downsample.cc -o downsample.o
g++ -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c spade.cc -o spade.o
spade.cc: In function 'void R_init_spade(DllInfo*)':
spade.cc:8:31: warning: unused variable '_CallFun' [-Wunused-variable]
g++ -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c upsample.cc -o upsample.o
g++ -m64 -shared -s -static-libgcc -o spade.dll tmp.def cluster.o downsample.o spade.o upsample.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LE:/biocbld/BBS-2˜1.12-/R/bin/x64 -lR
installing to E:/biocbld/bbs-2.12-bioc/meat/spade.buildbin-libdir/spade/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'spade' as spade_1.8.0.zip
* DONE (spade)