Package: SplicingGraphs

Version: 1.0.1

Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data SplicingGraphs

StartedAt: 2013-05-01 01:38:26 -0700 (Wed, 01 May 2013)

EndedAt: 2013-05-01 01:40:22 -0700 (Wed, 01 May 2013)

EllapsedTime: 115.1 seconds

RetCode: 1

Status:  ERROR

PackageFile: None

PackageFileSize: NA

* checking for file 'SplicingGraphs/DESCRIPTION' ... OK
* preparing 'SplicingGraphs':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: GenomicFeatures
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ, clusterExport,
    clusterMap, parApply, parCapply, parLapply, parLapplyLB, parRapply,
    parSapply, parSapplyLB

The following object is masked from 'package:stats':

    xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, as.data.frame, cbind,
    colnames, duplicated, eval, get, intersect, lapply, mapply, match, mget,
    order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind, rep.int,
    rownames, sapply, setdiff, sort, table, tapply, union, unique, unlist

Loading required package: IRanges
Loading required package: GenomicRanges
Loading required package: AnnotationDbi
Loading required package: Biobase
Welcome to Bioconductor

    Vignettes contain introductory material; view with 'browseVignettes()'. To
    cite Bioconductor, see 'citation("Biobase")', and for packages
    'citation("pkgname")'.

Loading required package: Rgraphviz
Loading required package: graph
Loading required package: grid
Loading required package: Rsamtools
Loading required package: Biostrings

Attaching package: 'Biostrings'

The following object is masked from 'package:graph':

    complement


Error: processing vignette 'SplicingGraphs.Rnw' failed with diagnostics:
 chunk 6 (label = loadPrecomputed_sg) 
Error in eval(expr, envir, enclos) : 
  'sg' is not identical to precomputed version
Execution halted