GeneSelectMMD 2.4.0
Weiliang Qiu
| Snapshot Date: 2013-10-08 17:00:48 -0700 (Tue, 08 Oct 2013) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_12/madman/Rpacks/GeneSelectMMD | | Last Changed Rev: 75263 / Revision: 81334 | | Last Changed Date: 2013-04-03 14:32:27 -0700 (Wed, 03 Apr 2013) |
| george2 | Linux (Ubuntu 12.04.1 LTS) / x86_64 | OK | OK | |
| moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | OK |
| petty | Mac OS X Snow Leopard (10.6.8) / x86_64 | OK | OK | [ OK ] |
>>>>>>>
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=GeneSelectMMD.buildbin-libdir GeneSelectMMD_2.4.0.tar.gz'
>>>>>>>
* installing *source* package 'GeneSelectMMD' ...
** libs
gfortran-4.2 -arch x86_64 -fPIC -g -O2 -Wall -pedantic -c Qfunc.f -o Qfunc.o
gfortran-4.2 -arch x86_64 -fPIC -g -O2 -Wall -pedantic -c blas.f -o blas.o
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -fPIC -mtune=core2 -g -O2 -c isnan.c -o isnan.o
gfortran-4.2 -arch x86_64 -fPIC -g -O2 -Wall -pedantic -c lbfgsb.f -o lbfgsb.o
lbfgsb.f: In function 'cauchy':
lbfgsb.f:1409: warning: 'tl' may be used uninitialized in this function
lbfgsb.f:1409: warning: 'tu' may be used uninitialized in this function
gfortran-4.2 -arch x86_64 -fPIC -g -O2 -Wall -pedantic -c lbfgsbDriver.f -o lbfgsbDriver.o
gfortran-4.2 -arch x86_64 -fPIC -g -O2 -Wall -pedantic -c linpack.f -o linpack.o
gfortran-4.2 -arch x86_64 -fPIC -g -O2 -Wall -pedantic -c llkhFun.f -o llkhFun.o
gfortran-4.2 -arch x86_64 -fPIC -g -O2 -Wall -pedantic -c myTtest.f -o myTtest.o
gfortran-4.2 -arch x86_64 -fPIC -g -O2 -Wall -pedantic -c paraEstLoop.f -o paraEstLoop.o
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -fPIC -mtune=core2 -g -O2 -c pt.c -o pt.o
gfortran-4.2 -arch x86_64 -fPIC -g -O2 -Wall -pedantic -c timer.f -o timer.o
gfortran-4.2 -arch x86_64 -fPIC -g -O2 -Wall -pedantic -c wiFun.f -o wiFun.o
llvm-gcc-4.2 -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -L/usr/local/lib -o GeneSelectMMD.so Qfunc.o blas.o isnan.o lbfgsb.o lbfgsbDriver.o linpack.o llkhFun.o myTtest.o paraEstLoop.o pt.o timer.o wiFun.o -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/x86_64 -L/usr/local/lib/x86_64 -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3 -lgfortran -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.12-bioc/meat/GeneSelectMMD.buildbin-libdir/GeneSelectMMD/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (GeneSelectMMD)
>>>>>>>
>>>>>>> FIXING LINKS FOR GeneSelectMMD.buildbin-libdir/GeneSelectMMD/libs//GeneSelectMMD.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.0/Resources/lib/libgcc_s.1.dylib" "GeneSelectMMD.buildbin-libdir/GeneSelectMMD/libs//GeneSelectMMD.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/3.0/Resources/lib/libgfortran.2.dylib" "GeneSelectMMD.buildbin-libdir/GeneSelectMMD/libs//GeneSelectMMD.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.0/Resources/lib/libreadline.5.2.dylib" "GeneSelectMMD.buildbin-libdir/GeneSelectMMD/libs//GeneSelectMMD.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.0/Resources/lib/libreadline.dylib" "GeneSelectMMD.buildbin-libdir/GeneSelectMMD/libs//GeneSelectMMD.so"