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BioC 2.12: BUILD BIN report for DESeq on moscato2

This page was generated on 2013-10-09 09:38:45 -0700 (Wed, 09 Oct 2013).

Package 176/671HostnameOS / ArchBUILDCHECKBUILD BIN
DESeq 1.12.1
Simon Anders
Snapshot Date: 2013-10-08 17:00:48 -0700 (Tue, 08 Oct 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_12/madman/Rpacks/DESeq
Last Changed Rev: 79715 / Revision: 81334
Last Changed Date: 2013-08-22 03:51:42 -0700 (Thu, 22 Aug 2013)
george2 Linux (Ubuntu 12.04.1 LTS) / x86_64  OK  OK 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK [ OK ]
petty Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK 

Summary

Package: DESeq
Version: 1.12.1
Command: rm -rf DESeq.buildbin-libdir && mkdir DESeq.buildbin-libdir && E:\biocbld\bbs-2.12-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=DESeq.buildbin-libdir DESeq_1.12.1.tar.gz
StartedAt: 2013-10-09 05:02:29 -0700 (Wed, 09 Oct 2013)
EndedAt: 2013-10-09 05:03:10 -0700 (Wed, 09 Oct 2013)
EllapsedTime: 40.5 seconds
RetCode: 0
Status:  OK  
PackageFile: DESeq_1.12.1.zip
PackageFileSize: 1.627 MiB

Command output


install for i386

* installing *source* package 'DESeq' ...
** libs
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c pval.c -o pval.o
pval.c: In function 'add_from_both_sides':
pval.c:26:11: warning: unused variable 'esttotalperlength' [-Wunused-variable]
gcc -m32 -shared -s -static-libgcc -o DESeq.dll tmp.def pval.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/i386 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LE:/biocbld/BBS-2˜1.12-/R/bin/i386 -lR
installing to E:/biocbld/bbs-2.12-bioc/meat/DESeq.buildbin-libdir/DESeq/libs/i386
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'DESeq' ...
** libs
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c pval.c -o pval.o
pval.c: In function 'add_from_both_sides':
pval.c:26:11: warning: unused variable 'esttotalperlength' [-Wunused-variable]
gcc -m64 -shared -s -static-libgcc -o DESeq.dll tmp.def pval.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LE:/biocbld/BBS-2˜1.12-/R/bin/x64 -lR
installing to E:/biocbld/bbs-2.12-bioc/meat/DESeq.buildbin-libdir/DESeq/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DESeq' as DESeq_1.12.1.zip
* DONE (DESeq)