gCMAP 1.2.1
Thomas Sandmann
| Snapshot Date: 2013-01-15 17:01:14 -0800 (Tue, 15 Jan 2013) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/gCMAP | | Last Changed Rev: 72495 / Revision: 72575 | | Last Changed Date: 2013-01-13 21:22:29 -0800 (Sun, 13 Jan 2013) |
| george2 | Linux (Ubuntu 12.04.1 LTS) / x86_64 | ERROR | skipped | |
| lamb2 | Linux (openSUSE 11.4) / x86_64 | [ ERROR ] | skipped | |
| moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | N O T S U P P O R T E D |
| petty | Mac OS X Leopard (10.5.8) / i386 | ERROR | skipped | skipped |
* checking for file ‘gCMAP/DESCRIPTION’ ... OK
* preparing ‘gCMAP’:
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: GSEABase
Loading required package: BiocGenerics
Loading required package: parallel
Attaching package: ‘BiocGenerics’
The following objects are masked from ‘package:parallel’:
clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
clusterExport, clusterMap, parApply, parCapply, parLapply,
parLapplyLB, parRapply, parSapply, parSapplyLB
The following object is masked from ‘package:stats’:
xtabs
The following objects are masked from ‘package:base’:
Filter, Find, Map, Position, Reduce, anyDuplicated, as.data.frame,
cbind, colnames, duplicated, eval, get, intersect, lapply, mapply,
match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank,
rbind, rep.int, rownames, sapply, setdiff, sort, table, tapply,
union, unique, unlist
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material; view with
‘browseVignettes()’. To cite Bioconductor, see
‘citation("Biobase")’, and for packages ‘citation("pkgname")’.
Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: graph
Loading required package: DESeq
Loading required package: locfit
locfit 1.5-8 2012-04-25
Loading required package: lattice
bigmemory >= 4.0 is a major revision since 3.1.2; please see package
biganalytics and http://www.bigmemory.org for more information.
Attaching to on-disk data:/tmp/Rtmpns6FEg/file43d17ea58bbc_z.desc.rds...
Loading required package: bigmemory
Loading required package: bigmemory
Loading required package: bigmemory.sri
Loading required package: bigmemory.sri
Design is based on ‘predictor’ parameter.
Error: processing vignette ‘gCMAP.Rnw’ failed with diagnostics:
chunk 13 (label = self_contained)
Error in UseMethod("mroast") :
no applicable method for ‘mroast’ applied to an object of class "list"
Execution halted