Package: XDE

Version: 2.6.0

Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch XDE_2.6.0.tar.gz

StartedAt: 2013-05-01 11:53:15 -0700 (Wed, 01 May 2013)

EndedAt: 2013-05-01 11:56:58 -0700 (Wed, 01 May 2013)

EllapsedTime: 223.8 seconds

RetCode: 0

Status:  OK

CheckDir: XDE.Rcheck

Warnings: 0

* using log directory '/Users/biocbuild/bbs-2.12-bioc/meat/XDE.Rcheck'
* using R version 3.0.0 Patched (2013-04-08 r62531)
* using platform: x86_64-apple-darwin10.8.0 (64-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'XDE/DESCRIPTION' ... OK
* this is package 'XDE' version '2.6.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... NOTE
Found the following hidden files and directories:
  data/.commands.R
  data/.createLogFiles.R
These were most likely included in error. See section 'Package
structure' in the 'Writing R Extensions' manual.
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package 'XDE' can be installed ... [43s/43s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
$,XdeMcmc: warning in matrix(mcmc, nr = iterations(x), nc =
  length(studyNames(x)), byrow = byrow): partial argument match of 'nr'
  to 'nrow'
$,XdeMcmc: warning in matrix(mcmc, nr = iterations(x), nc =
  length(studyNames(x)), byrow = byrow): partial argument match of 'nc'
  to 'ncol'
$,XdeMcmc: warning in matrix(mcmc, nc = 1, byrow = TRUE): partial
  argument match of 'nc' to 'ncol'
$,XdeMcmc: warning in matrix(mcmc, nc = S * (S - 1)/2, byrow = TRUE):
  partial argument match of 'nc' to 'ncol'
$,XdeMcmc: warning in matrix(mcmc, nc = 18, nr = iterations(x), byrow =
  TRUE): partial argument match of 'nr' to 'nrow'
$,XdeMcmc: warning in matrix(mcmc, nc = 18, nr = iterations(x), byrow =
  TRUE): partial argument match of 'nc' to 'ncol'
computeGOF: no visible binding for global variable 'psi'
modelA_B_MIupdates: no visible binding for global variable 'x'
modelA_B_MIupdates: no visible binding for global variable 'd'
rupdateBDDeltaStar_HyperInverseWishart: no visible binding for global
  variable 'phenodata'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable compilation flags in Makevars ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking compiled code ... OK
* checking installed files from 'inst/doc' ... OK
* checking examples ... [12s/13s] OK
* checking for unstated dependencies in tests ... OK
* checking tests ...
  Running 'doRUnit.R' [7s/7s]
 [8s/8s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

NOTE: There were 2 notes.
See
  '/Users/biocbuild/bbs-2.12-bioc/meat/XDE.Rcheck/00check.log'
for details.

* installing *source* package 'XDE' ...
** libs
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=native -g -O2 -Wall -pedantic -Wconversion -c Cholesky.cpp -o Cholesky.o
In file included from Cholesky.cpp:6:
./Cholesky.h:19:50: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int q_nrows(void) const               { return L.size();};
                                          ˜˜˜˜˜˜ ^˜˜˜˜˜˜˜
./Cholesky.h:20:50: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int q_ncols(void) const               { return L[0].size();};
                                          ˜˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜
Cholesky.cpp:16:12: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  L.resize(N);
  ˜        ^
Cholesky.cpp:19:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    L[i].resize(N);
    ˜ ^
Cholesky.cpp:19:17: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    L[i].resize(N);
    ˜           ^
Cholesky.cpp:31:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      L[i][j] = 0.0;
      ˜ ^
Cholesky.cpp:31:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      L[i][j] = 0.0;
      ˜    ^
Cholesky.cpp:40:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          for (sum = A[i][j],k=i-1; k >= 0; k--)
                     ˜ ^
Cholesky.cpp:40:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          for (sum = A[i][j],k=i-1; k >= 0; k--)
                     ˜    ^
Cholesky.cpp:41:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            sum -= L[i][k] * L[j][k];
                   ˜ ^
Cholesky.cpp:41:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            sum -= L[i][k] * L[j][k];
                   ˜    ^
Cholesky.cpp:41:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            sum -= L[i][k] * L[j][k];
                             ˜ ^
Cholesky.cpp:41:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            sum -= L[i][k] * L[j][k];
                             ˜    ^
Cholesky.cpp:50:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            L[j][i] = sqrt(sum);
            ˜ ^
Cholesky.cpp:50:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            L[j][i] = sqrt(sum);
            ˜    ^
Cholesky.cpp:52:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            L[j][i] = sum / L[i][i];
            ˜ ^
Cholesky.cpp:52:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            L[j][i] = sum / L[i][i];
            ˜    ^
Cholesky.cpp:52:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            L[j][i] = sum / L[i][i];
                            ˜ ^
Cholesky.cpp:52:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            L[j][i] = sum / L[i][i];
                            ˜    ^
Cholesky.cpp:14:67: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'const int' [-Wshorten-64-to-32]
Cholesky::Cholesky(const vector<vector<double> > &A,int &err) : N(A.size())
                                                                 ˜^˜˜˜˜˜˜˜
Cholesky.cpp:93:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (sum = b[i], k = i - 1; k >= 0; k--)
                 ˜ ^
Cholesky.cpp:94:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        sum -= L[i][k] * result[k];
               ˜ ^
Cholesky.cpp:94:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        sum -= L[i][k] * result[k];
               ˜    ^
Cholesky.cpp:94:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        sum -= L[i][k] * result[k];
                         ˜˜˜˜˜˜ ^
Cholesky.cpp:95:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      result[i] = sum / L[i][i];
      ˜˜˜˜˜˜ ^
Cholesky.cpp:95:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      result[i] = sum / L[i][i];
                        ˜ ^
Cholesky.cpp:95:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      result[i] = sum / L[i][i];
                        ˜    ^
Cholesky.cpp:101:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (sum = result[i], k = i + 1; k < n; k++)
                 ˜˜˜˜˜˜ ^
Cholesky.cpp:102:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        sum -= L[k][i] * result[k];
               ˜ ^
Cholesky.cpp:102:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        sum -= L[k][i] * result[k];
               ˜    ^
Cholesky.cpp:102:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        sum -= L[k][i] * result[k];
                         ˜˜˜˜˜˜ ^
Cholesky.cpp:103:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      result[i] = sum / L[i][i];
      ˜˜˜˜˜˜ ^
Cholesky.cpp:103:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      result[i] = sum / L[i][i];
                        ˜ ^
Cholesky.cpp:103:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      result[i] = sum / L[i][i];
                        ˜    ^
Cholesky.cpp:87:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int n = b.size();
      ˜   ^˜˜˜˜˜˜˜
35 warnings generated.
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=native -g -O2 -Wall -pedantic -Wconversion -c Matrix_v2.cpp -o Matrix_v2.o
In file included from Matrix_v2.cpp:1:
./Matrix_v2.h:4:17: warning: using directive refers to implicitly-defined namespace 'std'
using namespace std;
                ^
Matrix_v2.cpp:13:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  Ainv.resize(n);
  ˜˜˜˜        ^
Matrix_v2.cpp:15:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Ainv[i].resize(n);
    ˜˜˜˜ ^
Matrix_v2.cpp:15:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Ainv[i].resize(n);
    ˜˜˜˜           ^
Matrix_v2.cpp:17:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  vector<double> scale(n);
                 ˜˜˜˜˜ ^
Matrix_v2.cpp:19:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  b.resize(n);
  ˜        ^
Matrix_v2.cpp:21:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    b[i].resize(n);
    ˜ ^
Matrix_v2.cpp:21:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    b[i].resize(n);
    ˜           ^
Matrix_v2.cpp:22:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  vector<int> index(n+1);
              ˜˜˜˜˜ ˜^˜
Matrix_v2.cpp:29:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        b[i][j] = 0.0;
        ˜ ^
Matrix_v2.cpp:29:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        b[i][j] = 0.0;
        ˜    ^
Matrix_v2.cpp:30:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      b[i][i] = 1.0;
      ˜ ^
Matrix_v2.cpp:30:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      b[i][i] = 1.0;
      ˜    ^
Matrix_v2.cpp:37:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      index[i] = i;                       
      ˜˜˜˜˜ ^
Matrix_v2.cpp:40:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        scalemax = (scalemax > fabs(A[i][j])) ? scalemax : fabs(A[i][j]);
                                    ˜ ^
Matrix_v2.cpp:40:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        scalemax = (scalemax > fabs(A[i][j])) ? scalemax : fabs(A[i][j]);
                                    ˜    ^
Matrix_v2.cpp:40:60: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        scalemax = (scalemax > fabs(A[i][j])) ? scalemax : fabs(A[i][j]);
                                                                ˜ ^
Matrix_v2.cpp:40:63: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        scalemax = (scalemax > fabs(A[i][j])) ? scalemax : fabs(A[i][j]);
                                                                ˜    ^
Matrix_v2.cpp:41:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      scale[i] = scalemax;
      ˜˜˜˜˜ ^
Matrix_v2.cpp:54:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double ratio = fabs(A[index[i]][k])/scale[index[i]];
                              ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:54:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double ratio = fabs(A[index[i]][k])/scale[index[i]];
                                ˜˜˜˜˜ ^
Matrix_v2.cpp:54:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double ratio = fabs(A[index[i]][k])/scale[index[i]];
                              ˜           ^
Matrix_v2.cpp:54:46: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double ratio = fabs(A[index[i]][k])/scale[index[i]];
                                              ˜˜˜˜˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:54:52: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double ratio = fabs(A[index[i]][k])/scale[index[i]];
                                                    ˜˜˜˜˜ ^
Matrix_v2.cpp:62:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      int indexJ = index[k];
                   ˜˜˜˜˜ ^
Matrix_v2.cpp:64:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        indexJ = index[jPivot];
                 ˜˜˜˜˜ ^˜˜˜˜˜
Matrix_v2.cpp:65:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        index[jPivot] = index[k];   // Swap index jPivot and k
        ˜˜˜˜˜ ^˜˜˜˜˜
Matrix_v2.cpp:65:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        index[jPivot] = index[k];   // Swap index jPivot and k
                        ˜˜˜˜˜ ^
Matrix_v2.cpp:66:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        index[k] = indexJ;
        ˜˜˜˜˜ ^
Matrix_v2.cpp:73:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double coeff = A[index[i]][k]/A[indexJ][k];
                         ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:73:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double coeff = A[index[i]][k]/A[indexJ][k];
                           ˜˜˜˜˜ ^
Matrix_v2.cpp:73:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double coeff = A[index[i]][k]/A[indexJ][k];
                         ˜           ^
Matrix_v2.cpp:73:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double coeff = A[index[i]][k]/A[indexJ][k];
                                        ˜ ^˜˜˜˜˜
Matrix_v2.cpp:73:44: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double coeff = A[index[i]][k]/A[indexJ][k];
                                        ˜         ^
Matrix_v2.cpp:75:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            A[index[i]][j] -= coeff*A[indexJ][j];
            ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:75:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            A[index[i]][j] -= coeff*A[indexJ][j];
              ˜˜˜˜˜ ^
Matrix_v2.cpp:75:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            A[index[i]][j] -= coeff*A[indexJ][j];
            ˜           ^
Matrix_v2.cpp:75:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            A[index[i]][j] -= coeff*A[indexJ][j];
                                    ˜ ^˜˜˜˜˜
Matrix_v2.cpp:75:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            A[index[i]][j] -= coeff*A[indexJ][j];
                                    ˜         ^
Matrix_v2.cpp:76:6: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          A[index[i]][k] = coeff;
          ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:76:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          A[index[i]][k] = coeff;
            ˜˜˜˜˜ ^
Matrix_v2.cpp:76:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          A[index[i]][k] = coeff;
          ˜           ^
Matrix_v2.cpp:78:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            b[index[i]][j] -= A[index[i]][k]*b[indexJ][j];
            ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:78:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            b[index[i]][j] -= A[index[i]][k]*b[indexJ][j];
              ˜˜˜˜˜ ^
Matrix_v2.cpp:78:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            b[index[i]][j] -= A[index[i]][k]*b[indexJ][j];
            ˜           ^
Matrix_v2.cpp:78:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            b[index[i]][j] -= A[index[i]][k]*b[indexJ][j];
                              ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:78:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            b[index[i]][j] -= A[index[i]][k]*b[indexJ][j];
                                ˜˜˜˜˜ ^
Matrix_v2.cpp:78:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            b[index[i]][j] -= A[index[i]][k]*b[indexJ][j];
                              ˜           ^
Matrix_v2.cpp:78:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            b[index[i]][j] -= A[index[i]][k]*b[indexJ][j];
                                             ˜ ^˜˜˜˜˜
Matrix_v2.cpp:78:49: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            b[index[i]][j] -= A[index[i]][k]*b[indexJ][j];
                                             ˜         ^
Matrix_v2.cpp:85:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    determ *= A[index[i]][i];
              ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:85:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    determ *= A[index[i]][i];
                ˜˜˜˜˜ ^
Matrix_v2.cpp:85:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    determ *= A[index[i]][i];
              ˜           ^
Matrix_v2.cpp:90:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Ainv[n-1][k] = b[index[n-1]][k]/A[index[n-1]][n-1];
      ˜˜˜˜ ˜^˜
Matrix_v2.cpp:90:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Ainv[n-1][k] = b[index[n-1]][k]/A[index[n-1]][n-1];
      ˜˜˜˜      ^
Matrix_v2.cpp:90:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Ainv[n-1][k] = b[index[n-1]][k]/A[index[n-1]][n-1];
                     ˜ ^˜˜˜˜˜˜˜˜˜
Matrix_v2.cpp:90:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Ainv[n-1][k] = b[index[n-1]][k]/A[index[n-1]][n-1];
                       ˜˜˜˜˜ ˜^˜
Matrix_v2.cpp:90:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Ainv[n-1][k] = b[index[n-1]][k]/A[index[n-1]][n-1];
                     ˜             ^
Matrix_v2.cpp:90:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Ainv[n-1][k] = b[index[n-1]][k]/A[index[n-1]][n-1];
                                      ˜ ^˜˜˜˜˜˜˜˜˜
Matrix_v2.cpp:90:48: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Ainv[n-1][k] = b[index[n-1]][k]/A[index[n-1]][n-1];
                                        ˜˜˜˜˜ ˜^˜
Matrix_v2.cpp:90:54: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Ainv[n-1][k] = b[index[n-1]][k]/A[index[n-1]][n-1];
                                      ˜             ˜^˜
Matrix_v2.cpp:93:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double sum = b[index[i]][k];
                       ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:93:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double sum = b[index[i]][k];
                         ˜˜˜˜˜ ^
Matrix_v2.cpp:93:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double sum = b[index[i]][k];
                       ˜           ^
Matrix_v2.cpp:95:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            sum -= A[index[i]][j]*Ainv[j][k];
                   ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:95:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            sum -= A[index[i]][j]*Ainv[j][k];
                     ˜˜˜˜˜ ^
Matrix_v2.cpp:95:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            sum -= A[index[i]][j]*Ainv[j][k];
                   ˜           ^
Matrix_v2.cpp:95:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            sum -= A[index[i]][j]*Ainv[j][k];
                                  ˜˜˜˜ ^
Matrix_v2.cpp:95:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            sum -= A[index[i]][j]*Ainv[j][k];
                                  ˜˜˜˜    ^
Matrix_v2.cpp:96:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Ainv[i][k] = sum/A[index[i]][i];
          ˜˜˜˜ ^
Matrix_v2.cpp:96:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Ainv[i][k] = sum/A[index[i]][i];
          ˜˜˜˜    ^
Matrix_v2.cpp:96:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Ainv[i][k] = sum/A[index[i]][i];
                           ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:96:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Ainv[i][k] = sum/A[index[i]][i];
                             ˜˜˜˜˜ ^
Matrix_v2.cpp:96:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Ainv[i][k] = sum/A[index[i]][i];
                           ˜           ^
Matrix_v2.cpp:8:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int n = A.size();
      ˜   ^˜˜˜˜˜˜˜
Matrix_v2.cpp:116:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  Ainv.resize(n);
  ˜˜˜˜        ^
Matrix_v2.cpp:118:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Ainv[i].resize(n);
    ˜˜˜˜ ^
Matrix_v2.cpp:118:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Ainv[i].resize(n);
    ˜˜˜˜           ^
Matrix_v2.cpp:120:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  vector<double> scale(n);
                 ˜˜˜˜˜ ^
Matrix_v2.cpp:122:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  b.resize(n);
  ˜        ^
Matrix_v2.cpp:124:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    b[i].resize(n);
    ˜ ^
Matrix_v2.cpp:124:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    b[i].resize(n);
    ˜           ^
Matrix_v2.cpp:125:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  vector<int> index(n+1);
              ˜˜˜˜˜ ˜^˜
Matrix_v2.cpp:132:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        b[i][j] = 0.0;
        ˜ ^
Matrix_v2.cpp:132:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        b[i][j] = 0.0;
        ˜    ^
Matrix_v2.cpp:133:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      b[i][i] = 1.0;
      ˜ ^
Matrix_v2.cpp:133:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      b[i][i] = 1.0;
      ˜    ^
Matrix_v2.cpp:140:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      index[i] = i;                       
      ˜˜˜˜˜ ^
Matrix_v2.cpp:143:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        scalemax = (scalemax > fabs(A[i][j])) ? scalemax : fabs(A[i][j]);
                                    ˜ ^
Matrix_v2.cpp:143:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        scalemax = (scalemax > fabs(A[i][j])) ? scalemax : fabs(A[i][j]);
                                    ˜    ^
Matrix_v2.cpp:143:60: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        scalemax = (scalemax > fabs(A[i][j])) ? scalemax : fabs(A[i][j]);
                                                                ˜ ^
Matrix_v2.cpp:143:63: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        scalemax = (scalemax > fabs(A[i][j])) ? scalemax : fabs(A[i][j]);
                                                                ˜    ^
Matrix_v2.cpp:144:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      scale[i] = scalemax;
      ˜˜˜˜˜ ^
Matrix_v2.cpp:157:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double ratio = fabs(A[index[i]][k])/scale[index[i]];
                              ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:157:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double ratio = fabs(A[index[i]][k])/scale[index[i]];
                                ˜˜˜˜˜ ^
Matrix_v2.cpp:157:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double ratio = fabs(A[index[i]][k])/scale[index[i]];
                              ˜           ^
Matrix_v2.cpp:157:46: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double ratio = fabs(A[index[i]][k])/scale[index[i]];
                                              ˜˜˜˜˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:157:52: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double ratio = fabs(A[index[i]][k])/scale[index[i]];
                                                    ˜˜˜˜˜ ^
Matrix_v2.cpp:165:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      int indexJ = index[k];
                   ˜˜˜˜˜ ^
Matrix_v2.cpp:167:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        indexJ = index[jPivot];
                 ˜˜˜˜˜ ^˜˜˜˜˜
Matrix_v2.cpp:168:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        index[jPivot] = index[k];   // Swap index jPivot and k
        ˜˜˜˜˜ ^˜˜˜˜˜
Matrix_v2.cpp:168:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        index[jPivot] = index[k];   // Swap index jPivot and k
                        ˜˜˜˜˜ ^
Matrix_v2.cpp:169:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        index[k] = indexJ;
        ˜˜˜˜˜ ^
Matrix_v2.cpp:176:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double coeff = A[index[i]][k]/A[indexJ][k];
                         ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:176:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double coeff = A[index[i]][k]/A[indexJ][k];
                           ˜˜˜˜˜ ^
Matrix_v2.cpp:176:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double coeff = A[index[i]][k]/A[indexJ][k];
                         ˜           ^
Matrix_v2.cpp:176:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double coeff = A[index[i]][k]/A[indexJ][k];
                                        ˜ ^˜˜˜˜˜
Matrix_v2.cpp:176:44: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double coeff = A[index[i]][k]/A[indexJ][k];
                                        ˜         ^
Matrix_v2.cpp:178:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            A[index[i]][j] -= coeff*A[indexJ][j];
            ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:178:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            A[index[i]][j] -= coeff*A[indexJ][j];
              ˜˜˜˜˜ ^
Matrix_v2.cpp:178:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            A[index[i]][j] -= coeff*A[indexJ][j];
            ˜           ^
Matrix_v2.cpp:178:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            A[index[i]][j] -= coeff*A[indexJ][j];
                                    ˜ ^˜˜˜˜˜
Matrix_v2.cpp:178:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            A[index[i]][j] -= coeff*A[indexJ][j];
                                    ˜         ^
Matrix_v2.cpp:179:6: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          A[index[i]][k] = coeff;
          ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:179:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          A[index[i]][k] = coeff;
            ˜˜˜˜˜ ^
Matrix_v2.cpp:179:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          A[index[i]][k] = coeff;
          ˜           ^
Matrix_v2.cpp:181:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            b[index[i]][j] -= A[index[i]][k]*b[indexJ][j];
            ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:181:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            b[index[i]][j] -= A[index[i]][k]*b[indexJ][j];
              ˜˜˜˜˜ ^
Matrix_v2.cpp:181:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            b[index[i]][j] -= A[index[i]][k]*b[indexJ][j];
            ˜           ^
Matrix_v2.cpp:181:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            b[index[i]][j] -= A[index[i]][k]*b[indexJ][j];
                              ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:181:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            b[index[i]][j] -= A[index[i]][k]*b[indexJ][j];
                                ˜˜˜˜˜ ^
Matrix_v2.cpp:181:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            b[index[i]][j] -= A[index[i]][k]*b[indexJ][j];
                              ˜           ^
Matrix_v2.cpp:181:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            b[index[i]][j] -= A[index[i]][k]*b[indexJ][j];
                                             ˜ ^˜˜˜˜˜
Matrix_v2.cpp:181:49: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            b[index[i]][j] -= A[index[i]][k]*b[indexJ][j];
                                             ˜         ^
Matrix_v2.cpp:188:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    determ += log(abs(A[index[i]][i]));
                      ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:188:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    determ += log(abs(A[index[i]][i]));
                        ˜˜˜˜˜ ^
Matrix_v2.cpp:188:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    determ += log(abs(A[index[i]][i]));
                      ˜           ^
Matrix_v2.cpp:193:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Ainv[n-1][k] = b[index[n-1]][k]/A[index[n-1]][n-1];
      ˜˜˜˜ ˜^˜
Matrix_v2.cpp:193:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Ainv[n-1][k] = b[index[n-1]][k]/A[index[n-1]][n-1];
      ˜˜˜˜      ^
Matrix_v2.cpp:193:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Ainv[n-1][k] = b[index[n-1]][k]/A[index[n-1]][n-1];
                     ˜ ^˜˜˜˜˜˜˜˜˜
Matrix_v2.cpp:193:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Ainv[n-1][k] = b[index[n-1]][k]/A[index[n-1]][n-1];
                       ˜˜˜˜˜ ˜^˜
Matrix_v2.cpp:193:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Ainv[n-1][k] = b[index[n-1]][k]/A[index[n-1]][n-1];
                     ˜             ^
Matrix_v2.cpp:193:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Ainv[n-1][k] = b[index[n-1]][k]/A[index[n-1]][n-1];
                                      ˜ ^˜˜˜˜˜˜˜˜˜
Matrix_v2.cpp:193:48: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Ainv[n-1][k] = b[index[n-1]][k]/A[index[n-1]][n-1];
                                        ˜˜˜˜˜ ˜^˜
Matrix_v2.cpp:193:54: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Ainv[n-1][k] = b[index[n-1]][k]/A[index[n-1]][n-1];
                                      ˜             ˜^˜
Matrix_v2.cpp:196:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double sum = b[index[i]][k];
                       ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:196:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double sum = b[index[i]][k];
                         ˜˜˜˜˜ ^
Matrix_v2.cpp:196:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double sum = b[index[i]][k];
                       ˜           ^
Matrix_v2.cpp:198:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            sum -= A[index[i]][j]*Ainv[j][k];
                   ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:198:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            sum -= A[index[i]][j]*Ainv[j][k];
                     ˜˜˜˜˜ ^
Matrix_v2.cpp:198:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            sum -= A[index[i]][j]*Ainv[j][k];
                   ˜           ^
Matrix_v2.cpp:198:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            sum -= A[index[i]][j]*Ainv[j][k];
                                  ˜˜˜˜ ^
Matrix_v2.cpp:198:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            sum -= A[index[i]][j]*Ainv[j][k];
                                  ˜˜˜˜    ^
Matrix_v2.cpp:199:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Ainv[i][k] = sum/A[index[i]][i];
          ˜˜˜˜ ^
Matrix_v2.cpp:199:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Ainv[i][k] = sum/A[index[i]][i];
          ˜˜˜˜    ^
Matrix_v2.cpp:199:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Ainv[i][k] = sum/A[index[i]][i];
                           ˜ ^˜˜˜˜˜˜˜
Matrix_v2.cpp:199:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Ainv[i][k] = sum/A[index[i]][i];
                             ˜˜˜˜˜ ^
Matrix_v2.cpp:199:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Ainv[i][k] = sum/A[index[i]][i];
                           ˜           ^
Matrix_v2.cpp:111:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int n = A.size();
      ˜   ^˜˜˜˜˜˜˜
Matrix_v2.cpp:223:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  C.resize(m);
  ˜        ^
Matrix_v2.cpp:225:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    C[i].resize(k);
    ˜ ^
Matrix_v2.cpp:225:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    C[i].resize(k);
    ˜           ^
Matrix_v2.cpp:230:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        C[i][j] = 0.0;
        ˜ ^
Matrix_v2.cpp:230:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        C[i][j] = 0.0;
        ˜    ^
Matrix_v2.cpp:232:6: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[i][r] * B[r][j];
          ˜ ^
Matrix_v2.cpp:232:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[i][r] * B[r][j];
          ˜    ^
Matrix_v2.cpp:232:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[i][r] * B[r][j];
                     ˜ ^
Matrix_v2.cpp:232:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[i][r] * B[r][j];
                     ˜    ^
Matrix_v2.cpp:232:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[i][r] * B[r][j];
                               ˜ ^
Matrix_v2.cpp:232:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[i][r] * B[r][j];
                               ˜    ^
Matrix_v2.cpp:212:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int m = A.size();
      ˜   ^˜˜˜˜˜˜˜
Matrix_v2.cpp:213:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int n = A[0].size();
      ˜   ^˜˜˜˜˜˜˜˜˜˜
Matrix_v2.cpp:214:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int k = B[0].size();
      ˜   ^˜˜˜˜˜˜˜˜˜˜
Matrix_v2.cpp:251:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  C.resize(m);
  ˜        ^
Matrix_v2.cpp:255:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      C[i] = 0.0;
      ˜ ^
Matrix_v2.cpp:257:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        C[i] += A[i][r] * B[r];
        ˜ ^
Matrix_v2.cpp:257:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        C[i] += A[i][r] * B[r];
                ˜ ^
Matrix_v2.cpp:257:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        C[i] += A[i][r] * B[r];
                ˜    ^
Matrix_v2.cpp:257:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        C[i] += A[i][r] * B[r];
                          ˜ ^
Matrix_v2.cpp:244:7: warning: unused variable 'k' [-Wunused-variable]
  int k = 1;
      ^
Matrix_v2.cpp:246:9: warning: unused variable 'j' [-Wunused-variable]
  int i,j,r;
        ^
Matrix_v2.cpp:242:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int m = A.size();
      ˜   ^˜˜˜˜˜˜˜
Matrix_v2.cpp:243:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int n = A[0].size();
      ˜   ^˜˜˜˜˜˜˜˜˜˜
Matrix_v2.cpp:274:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  AAT.resize(m);
  ˜˜˜        ^
Matrix_v2.cpp:276:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    AAT[i].resize(m);
    ˜˜˜ ^
Matrix_v2.cpp:276:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    AAT[i].resize(m);
    ˜˜˜           ^
Matrix_v2.cpp:282:6: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        AAT[i][j] = 0.0;
        ˜˜˜ ^
Matrix_v2.cpp:282:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        AAT[i][j] = 0.0;
        ˜˜˜    ^
Matrix_v2.cpp:284:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          AAT[i][j] += A[i][k] * A[j][k];
          ˜˜˜ ^
Matrix_v2.cpp:284:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          AAT[i][j] += A[i][k] * A[j][k];
          ˜˜˜    ^
Matrix_v2.cpp:284:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          AAT[i][j] += A[i][k] * A[j][k];
                       ˜ ^
Matrix_v2.cpp:284:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          AAT[i][j] += A[i][k] * A[j][k];
                       ˜    ^
Matrix_v2.cpp:284:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          AAT[i][j] += A[i][k] * A[j][k];
                                 ˜ ^
Matrix_v2.cpp:284:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          AAT[i][j] += A[i][k] * A[j][k];
                                 ˜    ^
Matrix_v2.cpp:268:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int m = A.size();
      ˜   ^˜˜˜˜˜˜˜
Matrix_v2.cpp:269:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int n = A[0].size();
      ˜   ^˜˜˜˜˜˜˜˜˜˜
Matrix_v2.cpp:305:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      sum += A[i][j] * x[i] * x[j];
             ˜ ^
Matrix_v2.cpp:305:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      sum += A[i][j] * x[i] * x[j];
             ˜    ^
Matrix_v2.cpp:305:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      sum += A[i][j] * x[i] * x[j];
                       ˜ ^
Matrix_v2.cpp:305:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      sum += A[i][j] * x[i] * x[j];
                              ˜ ^
Matrix_v2.cpp:295:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int n = A.size();
      ˜   ^˜˜˜˜˜˜˜
Matrix_v2.cpp:318:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  C.resize(m);
  ˜        ^
Matrix_v2.cpp:321:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    C[i].resize(m);
    ˜ ^
Matrix_v2.cpp:321:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    C[i].resize(m);
    ˜           ^
Matrix_v2.cpp:326:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      C[i][j] = 0.0;
      ˜ ^
Matrix_v2.cpp:326:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      C[i][j] = 0.0;
      ˜    ^
Matrix_v2.cpp:330:6: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[k][i] * B[k][l] * A[l][j];
          ˜ ^
Matrix_v2.cpp:330:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[k][i] * B[k][l] * A[l][j];
          ˜    ^
Matrix_v2.cpp:330:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[k][i] * B[k][l] * A[l][j];
                     ˜ ^
Matrix_v2.cpp:330:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[k][i] * B[k][l] * A[l][j];
                     ˜    ^
Matrix_v2.cpp:330:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[k][i] * B[k][l] * A[l][j];
                               ˜ ^
Matrix_v2.cpp:330:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[k][i] * B[k][l] * A[l][j];
                               ˜    ^
Matrix_v2.cpp:330:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[k][i] * B[k][l] * A[l][j];
                                         ˜ ^
Matrix_v2.cpp:330:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[k][i] * B[k][l] * A[l][j];
                                         ˜    ^
Matrix_v2.cpp:315:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int n = B.size();
      ˜   ^˜˜˜˜˜˜˜
Matrix_v2.cpp:316:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int m = A[0].size();
      ˜   ^˜˜˜˜˜˜˜˜˜˜
Matrix_v2.cpp:345:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  C.resize(m);
  ˜        ^
Matrix_v2.cpp:348:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    C[i].resize(m);
    ˜ ^
Matrix_v2.cpp:348:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    C[i].resize(m);
    ˜           ^
Matrix_v2.cpp:353:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      C[i][j] = 0.0;
      ˜ ^
Matrix_v2.cpp:353:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      C[i][j] = 0.0;
      ˜    ^
Matrix_v2.cpp:357:6: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[i][k] * B[k][l] * A[j][l];
          ˜ ^
Matrix_v2.cpp:357:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[i][k] * B[k][l] * A[j][l];
          ˜    ^
Matrix_v2.cpp:357:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[i][k] * B[k][l] * A[j][l];
                     ˜ ^
Matrix_v2.cpp:357:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[i][k] * B[k][l] * A[j][l];
                     ˜    ^
Matrix_v2.cpp:357:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[i][k] * B[k][l] * A[j][l];
                               ˜ ^
Matrix_v2.cpp:357:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[i][k] * B[k][l] * A[j][l];
                               ˜    ^
Matrix_v2.cpp:357:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[i][k] * B[k][l] * A[j][l];
                                         ˜ ^
Matrix_v2.cpp:357:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          C[i][j] += A[i][k] * B[k][l] * A[j][l];
                                         ˜    ^
Matrix_v2.cpp:342:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int n = B.size();
      ˜   ^˜˜˜˜˜˜˜
Matrix_v2.cpp:343:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int m = A.size();
      ˜   ^˜˜˜˜˜˜˜
221 warnings generated.
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=native -g -O2 -Wall -pedantic -Wconversion -c Potential_v2.cpp -o Potential_v2.o
Potential_v2.cpp:135:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  std::vector<double> value(Q,0.0);
                      ˜˜˜˜˜ ^
Potential_v2.cpp:139:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    value[q] = nu[kqg];
    ˜˜˜˜˜ ^
Potential_v2.cpp:185:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  for (q = 0; q < Q; q++) dim += on[q];
                                 ˜˜ ^
Potential_v2.cpp:196:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  std::vector<double> value(dim,0.0);
                      ˜˜˜˜˜ ^˜˜
Potential_v2.cpp:199:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    if (on[q] == 1) {
        ˜˜ ^
Potential_v2.cpp:201:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      value[k] = Delta[kqg];
      ˜˜˜˜˜ ^
Potential_v2.cpp:224:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  zero.resize(G);
  ˜˜˜˜        ^
Potential_v2.cpp:227:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    zero[g].resize(Q);
    ˜˜˜˜ ^
Potential_v2.cpp:227:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    zero[g].resize(Q);
    ˜˜˜˜           ^
Potential_v2.cpp:229:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      zero[g][q] = 0.0;
      ˜˜˜˜ ^
Potential_v2.cpp:229:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      zero[g][q] = 0.0;
      ˜˜˜˜    ^
Potential_v2.cpp:233:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  R.resize(Q);
  ˜        ^
Potential_v2.cpp:235:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[q].resize(Q);
    ˜ ^
Potential_v2.cpp:235:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[q].resize(Q);
    ˜           ^
Potential_v2.cpp:238:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[q][q] = tau2R[q];
    ˜ ^
Potential_v2.cpp:238:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[q][q] = tau2R[q];
    ˜    ^
Potential_v2.cpp:241:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[q][p] = sqrt(tau2R[p] * tau2R[q]) * r[qq2index(p,q,Q)];
      ˜ ^
Potential_v2.cpp:241:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[q][p] = sqrt(tau2R[p] * tau2R[q]) * r[qq2index(p,q,Q)];
      ˜    ^
Potential_v2.cpp:242:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][q] = R[q][p];
      ˜ ^
Potential_v2.cpp:242:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][q] = R[q][p];
      ˜    ^
Potential_v2.cpp:242:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][q] = R[q][p];
                ˜ ^
Potential_v2.cpp:242:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][q] = R[q][p];
                ˜    ^
Potential_v2.cpp:247:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  DeltaStar.resize(G);
  ˜˜˜˜˜˜˜˜˜        ^
Potential_v2.cpp:249:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    DeltaStar[g].resize(Q);
    ˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:249:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    DeltaStar[g].resize(Q);
    ˜˜˜˜˜˜˜˜˜           ^
Potential_v2.cpp:251:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DeltaStar[g][q] = Delta[qg2index(q,g,Q,G)] / exp(0.5 * b[q] * log(sigma2[qg2index(q,g,Q,G)]));
      ˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:251:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DeltaStar[g][q] = Delta[qg2index(q,g,Q,G)] / exp(0.5 * b[q] * log(sigma2[qg2index(q,g,Q,G)]));
      ˜˜˜˜˜˜˜˜˜    ^
Potential_v2.cpp:275:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  R.resize(Q);
  ˜        ^
Potential_v2.cpp:278:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[q].resize(Q);
    ˜ ^
Potential_v2.cpp:278:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[q].resize(Q);
    ˜           ^
Potential_v2.cpp:281:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[q][q] = tau2R[q];
    ˜ ^
Potential_v2.cpp:281:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[q][q] = tau2R[q];
    ˜    ^
Potential_v2.cpp:284:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[q][p] = sqrt(tau2R[p] * tau2R[q]) * r[qq2index(p,q,Q)];
      ˜ ^
Potential_v2.cpp:284:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[q][p] = sqrt(tau2R[p] * tau2R[q]) * r[qq2index(p,q,Q)];
      ˜    ^
Potential_v2.cpp:285:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][q] = R[q][p];
      ˜ ^
Potential_v2.cpp:285:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][q] = R[q][p];
      ˜    ^
Potential_v2.cpp:285:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][q] = R[q][p];
                ˜ ^
Potential_v2.cpp:285:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][q] = R[q][p];
                ˜    ^
Potential_v2.cpp:290:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  DeltaStar.resize(G);
  ˜˜˜˜˜˜˜˜˜        ^
Potential_v2.cpp:292:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    DeltaStar[g].resize(Q);
    ˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:292:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    DeltaStar[g].resize(Q);
    ˜˜˜˜˜˜˜˜˜           ^
Potential_v2.cpp:294:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DeltaStar[g][q] = Delta[qg2index(q,g,Q,G)] / exp(0.5 * b[q] * log(sigma2[qg2index(q,g,Q,G)]));
      ˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:294:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DeltaStar[g][q] = Delta[qg2index(q,g,Q,G)] / exp(0.5 * b[q] * log(sigma2[qg2index(q,g,Q,G)]));
      ˜˜˜˜˜˜˜˜˜    ^
Potential_v2.cpp:309:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    UBlocks[k].resize(Omega[k].size());
    ˜˜˜˜˜˜˜ ^
Potential_v2.cpp:309:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    UBlocks[k].resize(Omega[k].size());
                      ˜˜˜˜˜ ^
Potential_v2.cpp:310:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (i = 0; i < UBlocks[k].size(); i++)
                    ˜˜˜˜˜˜˜ ^
Potential_v2.cpp:311:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[k][i].resize(R.size());
      ˜˜˜˜˜˜˜ ^
Potential_v2.cpp:311:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[k][i].resize(R.size());
      ˜˜˜˜˜˜˜    ^
Potential_v2.cpp:317:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    theGene[k].resize(UBlocks[k].size());  
    ˜˜˜˜˜˜˜ ^
Potential_v2.cpp:317:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    theGene[k].resize(UBlocks[k].size());  
                      ˜˜˜˜˜˜˜ ^
Potential_v2.cpp:322:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (j = 0; j < UU[first].size(); j++) {
                    ˜˜ ^˜˜˜˜
Potential_v2.cpp:323:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[0][i][j] = UU[first + i][j];
      ˜˜˜˜˜˜˜    ^
Potential_v2.cpp:323:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[0][i][j] = UU[first + i][j];
      ˜˜˜˜˜˜˜       ^
Potential_v2.cpp:323:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[0][i][j] = UU[first + i][j];
                         ˜˜ ˜˜˜˜˜˜^˜˜
Potential_v2.cpp:323:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[0][i][j] = UU[first + i][j];
                         ˜˜            ^
Potential_v2.cpp:324:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      theGene[0][i] = (first + i == gene);
      ˜˜˜˜˜˜˜    ^
Potential_v2.cpp:329:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (i = 0; i < oldComponents[k].size(); i++)
                    ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:330:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (j = 0; j < UU[first].size(); j++) {
                      ˜˜ ^˜˜˜˜
Potential_v2.cpp:331:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i][j] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
        ˜˜˜˜˜˜˜ ^
Potential_v2.cpp:331:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i][j] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
        ˜˜˜˜˜˜˜    ^
Potential_v2.cpp:331:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i][j] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
        ˜˜˜˜˜˜˜       ^
Potential_v2.cpp:331:29: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i][j] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
                           ˜˜˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜˜
Potential_v2.cpp:331:39: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i][j] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
                                   ˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:331:43: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i][j] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
                           ˜˜˜˜˜˜˜               ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Potential_v2.cpp:331:57: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i][j] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
                                                 ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:331:60: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i][j] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
                                                 ˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Potential_v2.cpp:331:64: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i][j] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
                           ˜˜˜˜˜˜˜                                    ^
Potential_v2.cpp:332:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        theGene[k][i] = theGene[oldClique[k]][oldComponents[k][i]];
        ˜˜˜˜˜˜˜ ^
Potential_v2.cpp:332:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        theGene[k][i] = theGene[oldClique[k]][oldComponents[k][i]];
        ˜˜˜˜˜˜˜    ^
Potential_v2.cpp:332:26: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        theGene[k][i] = theGene[oldClique[k]][oldComponents[k][i]];
                        ˜˜˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜˜
Potential_v2.cpp:332:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        theGene[k][i] = theGene[oldClique[k]][oldComponents[k][i]];
                                ˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:332:40: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        theGene[k][i] = theGene[oldClique[k]][oldComponents[k][i]];
                        ˜˜˜˜˜˜˜               ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Potential_v2.cpp:332:54: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        theGene[k][i] = theGene[oldClique[k]][oldComponents[k][i]];
                                              ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:332:57: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        theGene[k][i] = theGene[oldClique[k]][oldComponents[k][i]];
                                              ˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Potential_v2.cpp:335:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (i = 0; i < Omega[k].size() - oldComponents[k].size(); i++)
                    ˜˜˜˜˜ ^
Potential_v2.cpp:335:53: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (i = 0; i < Omega[k].size() - oldComponents[k].size(); i++)
                                      ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:336:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (j = 0; j < UU[first].size(); j++) {
                      ˜˜ ^˜˜˜˜
Potential_v2.cpp:337:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i + oldComponents[k].size()][j] = UU[first + i][j];
        ˜˜˜˜˜˜˜ ^
Potential_v2.cpp:337:13: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
        UBlocks[k][i + oldComponents[k].size()][j] = UU[first + i][j];
                   ^ ˜
Potential_v2.cpp:337:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i + oldComponents[k].size()][j] = UU[first + i][j];
                       ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:337:42: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i + oldComponents[k].size()][j] = UU[first + i][j];
        ˜˜˜˜˜˜˜                                 ^
Potential_v2.cpp:337:56: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i + oldComponents[k].size()][j] = UU[first + i][j];
                                                     ˜˜ ˜˜˜˜˜˜^˜˜
Potential_v2.cpp:337:61: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i + oldComponents[k].size()][j] = UU[first + i][j];
                                                     ˜˜            ^
Potential_v2.cpp:338:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        theGene[k][i + oldComponents[k].size()] = (first + i == gene);
        ˜˜˜˜˜˜˜ ^
Potential_v2.cpp:338:13: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
        theGene[k][i + oldComponents[k].size()] = (first + i == gene);
                   ^ ˜
Potential_v2.cpp:338:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        theGene[k][i + oldComponents[k].size()] = (first + i == gene);
                       ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:340:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    first += Omega[k].size() - oldComponents[k].size();
             ˜˜˜˜˜ ^
Potential_v2.cpp:340:46: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    first += Omega[k].size() - oldComponents[k].size();
                               ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:347:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (i = 0; i < theGene[k].size(); i++)
                    ˜˜˜˜˜˜˜ ^
Potential_v2.cpp:348:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      if (theGene[k][i] == 1) include = 1;
          ˜˜˜˜˜˜˜ ^
Potential_v2.cpp:348:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      if (theGene[k][i] == 1) include = 1;
          ˜˜˜˜˜˜˜    ^
Potential_v2.cpp:351:53: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      pot += ran.PotentialMatrixVariateNormal(Omega[k],R,UBlocks[k]);
                                              ˜˜˜˜˜ ^
Potential_v2.cpp:351:66: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      pot += ran.PotentialMatrixVariateNormal(Omega[k],R,UBlocks[k]);
                                                         ˜˜˜˜˜˜˜ ^
Potential_v2.cpp:357:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    if (oldComponents[k].size() > 0) {
        ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:362:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      OmegaSub.resize(oldComponents[k].size());
                      ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:363:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      USub.resize(oldComponents[k].size());
                  ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:365:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaSub[i].resize(oldComponents[k].size());
        ˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:365:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaSub[i].resize(oldComponents[k].size());
                           ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:366:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < OmegaSub[i].size(); j++)
                        ˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:367:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaSub[i][j] = Omega[k][i][j];
          ˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:367:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaSub[i][j] = Omega[k][i][j];
          ˜˜˜˜˜˜˜˜    ^
Potential_v2.cpp:367:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaSub[i][j] = Omega[k][i][j];
                           ˜˜˜˜˜ ^
Potential_v2.cpp:367:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaSub[i][j] = Omega[k][i][j];
                           ˜˜˜˜˜    ^
Potential_v2.cpp:367:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaSub[i][j] = Omega[k][i][j];
                           ˜˜˜˜˜       ^
Potential_v2.cpp:370:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        USub[i].resize(UBlocks[k][i].size());
        ˜˜˜˜ ^
Potential_v2.cpp:370:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        USub[i].resize(UBlocks[k][i].size());
                       ˜˜˜˜˜˜˜ ^
Potential_v2.cpp:370:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        USub[i].resize(UBlocks[k][i].size());
                       ˜˜˜˜˜˜˜    ^
Potential_v2.cpp:371:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < USub[i].size(); j++)
                        ˜˜˜˜ ^
Potential_v2.cpp:372:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          USub[i][j] = UBlocks[k][i][j];
          ˜˜˜˜ ^
Potential_v2.cpp:372:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          USub[i][j] = UBlocks[k][i][j];
          ˜˜˜˜    ^
Potential_v2.cpp:372:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          USub[i][j] = UBlocks[k][i][j];
                       ˜˜˜˜˜˜˜ ^
Potential_v2.cpp:372:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          USub[i][j] = UBlocks[k][i][j];
                       ˜˜˜˜˜˜˜    ^
Potential_v2.cpp:372:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          USub[i][j] = UBlocks[k][i][j];
                       ˜˜˜˜˜˜˜       ^
Potential_v2.cpp:374:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        if (theGene[k][i] == 1) include == 1;
            ˜˜˜˜˜˜˜ ^
Potential_v2.cpp:374:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        if (theGene[k][i] == 1) include == 1;
            ˜˜˜˜˜˜˜    ^
Potential_v2.cpp:374:34: warning: equality comparison result unused [-Wunused-comparison]
        if (theGene[k][i] == 1) include == 1;
                                ˜˜˜˜˜˜˜˜^˜˜˜
Potential_v2.cpp:374:34: note: use '=' to turn this equality comparison into an assignment
        if (theGene[k][i] == 1) include == 1;
                                        ^˜
                                        =
Potential_v2.cpp:418:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    on[q] = delta[kqg];
    ˜˜ ^
Potential_v2.cpp:443:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      on[q] = delta[kqg];
      ˜˜ ^
Potential_v2.cpp:444:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nOn += on[q];
             ˜˜ ^
Potential_v2.cpp:518:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  rMatrix.resize(Q);
  ˜˜˜˜˜˜˜        ^
Potential_v2.cpp:521:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    rMatrix[p].resize(Q);
    ˜˜˜˜˜˜˜ ^
Potential_v2.cpp:521:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    rMatrix[p].resize(Q);
    ˜˜˜˜˜˜˜           ^
Potential_v2.cpp:524:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    rMatrix[p][p] = 1.0;
    ˜˜˜˜˜˜˜ ^
Potential_v2.cpp:524:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    rMatrix[p][p] = 1.0;
    ˜˜˜˜˜˜˜    ^
Potential_v2.cpp:527:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      rMatrix[p][q] = r[kqq];
      ˜˜˜˜˜˜˜ ^
Potential_v2.cpp:527:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      rMatrix[p][q] = r[kqq];
      ˜˜˜˜˜˜˜    ^
Potential_v2.cpp:528:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      rMatrix[q][p] = r[kqq];
      ˜˜˜˜˜˜˜ ^
Potential_v2.cpp:528:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      rMatrix[q][p] = r[kqq];
      ˜˜˜˜˜˜˜    ^
Potential_v2.cpp:546:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  rhoMatrix.resize(Q);
  ˜˜˜˜˜˜˜˜˜        ^
Potential_v2.cpp:549:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    rhoMatrix[p].resize(Q);
    ˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:549:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    rhoMatrix[p].resize(Q);
    ˜˜˜˜˜˜˜˜˜           ^
Potential_v2.cpp:552:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    rhoMatrix[p][p] = 1.0;
    ˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:552:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    rhoMatrix[p][p] = 1.0;
    ˜˜˜˜˜˜˜˜˜    ^
Potential_v2.cpp:555:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      rhoMatrix[p][q] = rho[kqq];
      ˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:555:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      rhoMatrix[p][q] = rho[kqq];
      ˜˜˜˜˜˜˜˜˜    ^
Potential_v2.cpp:556:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      rhoMatrix[q][p] = rho[kqq];
      ˜˜˜˜˜˜˜˜˜ ^
Potential_v2.cpp:556:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      rhoMatrix[q][p] = rho[kqq];
      ˜˜˜˜˜˜˜˜˜    ^
Potential_v2.cpp:792:28: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
  int *dd = (int *) calloc(G,sizeof(int));
                    ˜˜˜˜˜˜ ^
Potential_v2.cpp:816:28: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
  int *dd = (int *) calloc(G,sizeof(int));
                    ˜˜˜˜˜˜ ^
Potential_v2.cpp:843:30: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
  int *dd = (int *) calloc(Q * G,sizeof(int));
                    ˜˜˜˜˜˜ ˜˜^˜˜
Potential_v2.cpp:876:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
  if (omega0 = 0.0)
      ˜˜˜˜˜˜˜^˜˜˜˜
Potential_v2.cpp:876:14: note: place parentheses around the assignment to silence this warning
  if (omega0 = 0.0)
             ^
      (           )
Potential_v2.cpp:876:14: note: use '==' to turn this assignment into an equality comparison
  if (omega0 = 0.0)
             ^
             ==
Potential_v2.cpp:876:14: warning: implicit conversion turns floating-point number into integer: 'double' to 'bool' [-Wconversion]
  if (omega0 = 0.0)
  ˜˜  ˜˜˜˜˜˜˜^˜˜˜˜
142 warnings generated.
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=native -g -O2 -Wall -pedantic -Wconversion -c Random_v2.cpp -o Random_v2.o
In file included from Random_v2.cpp:8:
./Cholesky.h:19:50: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int q_nrows(void) const               { return L.size();};
                                          ˜˜˜˜˜˜ ^˜˜˜˜˜˜˜
./Cholesky.h:20:50: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int q_ncols(void) const               { return L[0].size();};
                                          ˜˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜
Random_v2.cpp:66:31: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
      seedValue = seedValue - nn * modulus*2;
                              ^˜ ˜
Random_v2.cpp:160:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    sum += prob[i];
           ˜˜˜˜ ^
Random_v2.cpp:166:42: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  for (v = 0; u > sum; v++) sum += prob[v+1];
                                   ˜˜˜˜ ˜^˜
Random_v2.cpp:380:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  vector<double> vec(n);
                 ˜˜˜ ^
Random_v2.cpp:382:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    vec[i] = Norm01();
    ˜˜˜ ^
Random_v2.cpp:387:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  vector<double> x(n);
                 ˜ ^
Random_v2.cpp:389:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    x[i] = z[i] + mean[i];
    ˜ ^
Random_v2.cpp:389:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    x[i] = z[i] + mean[i];
           ˜ ^
Random_v2.cpp:389:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    x[i] = z[i] + mean[i];
                  ˜˜˜˜ ^
Random_v2.cpp:370:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int n = mean.size();
      ˜   ^˜˜˜˜˜˜˜˜˜˜
Random_v2.cpp:409:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  T.resize(p);
  ˜        ^
Random_v2.cpp:411:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  for (i = 0; i < p; i++) T[i].resize(p);
                          ˜ ^
Random_v2.cpp:411:39: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  for (i = 0; i < p; i++) T[i].resize(p);
                          ˜           ^
Random_v2.cpp:414:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      T[i][j] = 0.0;
      ˜ ^
Random_v2.cpp:414:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      T[i][j] = 0.0;
      ˜    ^
Random_v2.cpp:416:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    T[i][i] = sqrt(ChiSquared(nu-i+1.0));
    ˜ ^
Random_v2.cpp:416:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    T[i][i] = sqrt(ChiSquared(nu-i+1.0));
    ˜    ^
Random_v2.cpp:420:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      T[i][j] = Norm01();
      ˜ ^
Random_v2.cpp:420:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      T[i][j] = Norm01();
      ˜    ^
Random_v2.cpp:407:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int p = V.size();
      ˜   ^˜˜˜˜˜˜˜
Random_v2.cpp:457:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  T.resize(p);
  ˜        ^
Random_v2.cpp:460:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    T[i].resize(p);
    ˜ ^
Random_v2.cpp:460:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    T[i].resize(p);
    ˜           ^
Random_v2.cpp:464:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      T[i][j] = 0.0;
      ˜ ^
Random_v2.cpp:464:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      T[i][j] = 0.0;
      ˜    ^
Random_v2.cpp:466:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    T[i][i] = sqrt(ChiSquared(nu-i+1.0));
    ˜ ^
Random_v2.cpp:466:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    T[i][i] = sqrt(ChiSquared(nu-i+1.0));
    ˜    ^
Random_v2.cpp:470:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      T[i][j] = Norm01();
      ˜ ^
Random_v2.cpp:470:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      T[i][j] = Norm01();
      ˜    ^
Random_v2.cpp:486:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  vector<vector<double> > w(dim);
                          ˜ ^˜˜
Random_v2.cpp:489:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    w[i].resize(dim);
    ˜ ^
Random_v2.cpp:489:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    w[i].resize(dim);
    ˜           ^˜˜
Random_v2.cpp:504:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  vector<vector<double> > w(dim);
                          ˜ ^˜˜
Random_v2.cpp:507:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    w[i].resize(dim);
    ˜ ^
Random_v2.cpp:507:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    w[i].resize(dim);
    ˜           ^˜˜
Random_v2.cpp:514:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      ww[i].resize(w[i].size());
      ˜˜ ^
Random_v2.cpp:514:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      ww[i].resize(w[i].size());
                   ˜ ^
Random_v2.cpp:515:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (j = 0; j < w[i].size(); j++)
                      ˜ ^
Random_v2.cpp:516:5: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        ww[i][j] = w[i][j] / sqrt(w[i][i] * w[j][j]);
        ˜˜ ^
Random_v2.cpp:516:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        ww[i][j] = w[i][j] / sqrt(w[i][i] * w[j][j]);
        ˜˜    ^
Random_v2.cpp:516:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        ww[i][j] = w[i][j] / sqrt(w[i][i] * w[j][j]);
                   ˜ ^
Random_v2.cpp:516:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        ww[i][j] = w[i][j] / sqrt(w[i][i] * w[j][j]);
                   ˜    ^
Random_v2.cpp:516:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        ww[i][j] = w[i][j] / sqrt(w[i][i] * w[j][j]);
                                  ˜ ^
Random_v2.cpp:516:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        ww[i][j] = w[i][j] / sqrt(w[i][i] * w[j][j]);
                                  ˜    ^
Random_v2.cpp:516:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        ww[i][j] = w[i][j] / sqrt(w[i][i] * w[j][j]);
                                            ˜ ^
Random_v2.cpp:516:43: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        ww[i][j] = w[i][j] / sqrt(w[i][i] * w[j][j]);
                                            ˜    ^
Random_v2.cpp:549:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Sigma[k].resize(D[k].size());
    ˜˜˜˜˜ ^
Random_v2.cpp:549:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Sigma[k].resize(D[k].size());
                    ˜ ^
Random_v2.cpp:551:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (i = 0; i < Sigma[k].size(); i++)
                    ˜˜˜˜˜ ^
Random_v2.cpp:552:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[k][i].resize(D[k].size());
      ˜˜˜˜˜ ^
Random_v2.cpp:552:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[k][i].resize(D[k].size());
      ˜˜˜˜˜    ^
Random_v2.cpp:552:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[k][i].resize(D[k].size());
                         ˜ ^
Random_v2.cpp:558:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (j = 0; j < temp[i].size(); j++)
                    ˜˜˜˜ ^
Random_v2.cpp:559:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[0][i][j] = temp[i][j];
      ˜˜˜˜˜    ^
Random_v2.cpp:559:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[0][i][j] = temp[i][j];
      ˜˜˜˜˜       ^
Random_v2.cpp:559:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[0][i][j] = temp[i][j];
                       ˜˜˜˜ ^
Random_v2.cpp:559:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[0][i][j] = temp[i][j];
                       ˜˜˜˜    ^
Random_v2.cpp:573:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    if (oldComponents[k].size() > 0) {
        ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:580:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DRR.resize(D[k].size() - oldComponents[k].size());
                 ˜ ^
Random_v2.cpp:580:46: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DRR.resize(D[k].size() - oldComponents[k].size());
                               ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:581:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DSS.resize(oldComponents[k].size());
                 ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:585:44: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (i = 0; i < DRR.size(); i++) DRR[i].resize(DRR.size());
                                       ˜˜˜ ^
Random_v2.cpp:586:44: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (i = 0; i < DSS.size(); i++) DSS[i].resize(DSS.size());
                                       ˜˜˜ ^
Random_v2.cpp:587:44: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (i = 0; i < DRS.size(); i++) DRS[i].resize(DSS.size());
                                       ˜˜˜ ^
Random_v2.cpp:588:44: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (i = 0; i < DSR.size(); i++) DSR[i].resize(DRR.size());
                                       ˜˜˜ ^
Random_v2.cpp:591:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < DSS[i].size(); j++)
                        ˜˜˜ ^
Random_v2.cpp:592:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DSS[i][j] = D[k][i][j];
          ˜˜˜ ^
Random_v2.cpp:592:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DSS[i][j] = D[k][i][j];
          ˜˜˜    ^
Random_v2.cpp:592:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DSS[i][j] = D[k][i][j];
                      ˜ ^
Random_v2.cpp:592:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DSS[i][j] = D[k][i][j];
                      ˜    ^
Random_v2.cpp:592:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DSS[i][j] = D[k][i][j];
                      ˜       ^
Random_v2.cpp:595:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < DRR[i].size(); j++)
                        ˜˜˜ ^
Random_v2.cpp:596:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DRR[i][j] = D[k][i + DSS.size()][j + DSS.size()];
          ˜˜˜ ^
Random_v2.cpp:596:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DRR[i][j] = D[k][i + DSS.size()][j + DSS.size()];
          ˜˜˜    ^
Random_v2.cpp:596:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DRR[i][j] = D[k][i + DSS.size()][j + DSS.size()];
                      ˜ ^
Random_v2.cpp:596:21: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
          DRR[i][j] = D[k][i + DSS.size()][j + DSS.size()];
                           ^ ˜
Random_v2.cpp:596:37: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
          DRR[i][j] = D[k][i + DSS.size()][j + DSS.size()];
                                           ^ ˜
Random_v2.cpp:599:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < DSR[i].size(); j++) {
                        ˜˜˜ ^
Random_v2.cpp:600:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DSR[i][j] = D[k][i][j + DSS.size()];
          ˜˜˜ ^
Random_v2.cpp:600:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DSR[i][j] = D[k][i][j + DSS.size()];
          ˜˜˜    ^
Random_v2.cpp:600:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DSR[i][j] = D[k][i][j + DSS.size()];
                      ˜ ^
Random_v2.cpp:600:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DSR[i][j] = D[k][i][j + DSS.size()];
                      ˜    ^
Random_v2.cpp:600:24: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
          DSR[i][j] = D[k][i][j + DSS.size()];
                              ^ ˜
Random_v2.cpp:601:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DRS[j][i] = D[k][j + DSS.size()][i];
          ˜˜˜ ^
Random_v2.cpp:601:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DRS[j][i] = D[k][j + DSS.size()][i];
          ˜˜˜    ^
Random_v2.cpp:601:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DRS[j][i] = D[k][j + DSS.size()][i];
                      ˜ ^
Random_v2.cpp:601:21: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
          DRS[j][i] = D[k][j + DSS.size()][i];
                           ^ ˜
Random_v2.cpp:601:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DRS[j][i] = D[k][j + DSS.size()][i];
                      ˜                    ^
Random_v2.cpp:607:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      SigmaSS.resize(oldComponents[k].size());
                     ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:609:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        SigmaSS[i].resize(oldComponents[k].size());
        ˜˜˜˜˜˜˜ ^
Random_v2.cpp:609:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        SigmaSS[i].resize(oldComponents[k].size());
                          ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:610:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < SigmaSS[i].size(); j++)
                        ˜˜˜˜˜˜˜ ^
Random_v2.cpp:611:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
          ˜˜˜˜˜˜˜ ^
Random_v2.cpp:611:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
          ˜˜˜˜˜˜˜    ^
Random_v2.cpp:611:26: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                          ˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜˜
Random_v2.cpp:611:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                                ˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:611:40: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                          ˜˜˜˜˜               ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Random_v2.cpp:611:54: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                                              ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:611:57: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                                              ˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:611:61: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                          ˜˜˜˜˜                                    ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Random_v2.cpp:611:75: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                                                                   ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:611:78: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                                                                   ˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:626:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DRGivenS[i].resize(DRR.size());
        ˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:627:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < DRR[i].size(); j++)
                        ˜˜˜ ^
Random_v2.cpp:628:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DRGivenS[i][j] = DRR[i][j] - temp2[i][j];
          ˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:628:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DRGivenS[i][j] = DRR[i][j] - temp2[i][j];
          ˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:628:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DRGivenS[i][j] = DRR[i][j] - temp2[i][j];
                           ˜˜˜ ^
Random_v2.cpp:628:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DRGivenS[i][j] = DRR[i][j] - temp2[i][j];
                           ˜˜˜    ^
Random_v2.cpp:628:39: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DRGivenS[i][j] = DRR[i][j] - temp2[i][j];
                                       ˜˜˜˜˜ ^
Random_v2.cpp:628:42: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DRGivenS[i][j] = DRR[i][j] - temp2[i][j];
                                       ˜˜˜˜˜    ^
Random_v2.cpp:676:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        LDSSInverseT[i].resize(LDSSInverse.size());
        ˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:677:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < LDSSInverseT[i].size(); j++)
                        ˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:678:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          LDSSInverseT[i][j] = LDSSInverse[j][i];
          ˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:678:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          LDSSInverseT[i][j] = LDSSInverse[j][i];
          ˜˜˜˜˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:678:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          LDSSInverseT[i][j] = LDSSInverse[j][i];
                               ˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:678:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          LDSSInverseT[i][j] = LDSSInverse[j][i];
                               ˜˜˜˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:694:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        U[i].resize(DSS.size());
        ˜ ^
Random_v2.cpp:696:6: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          U[i][j] = Norm01();
          ˜ ^
Random_v2.cpp:696:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          U[i][j] = Norm01();
          ˜    ^
Random_v2.cpp:706:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < mean[i].size(); j++)
                        ˜˜˜˜ ^
Random_v2.cpp:707:6: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          U[i][j] += mean[i][j];
          ˜ ^
Random_v2.cpp:707:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          U[i][j] += mean[i][j];
          ˜    ^
Random_v2.cpp:707:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          U[i][j] += mean[i][j];
                     ˜˜˜˜ ^
Random_v2.cpp:707:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          U[i][j] += mean[i][j];
                     ˜˜˜˜    ^
Random_v2.cpp:727:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        SigmaSR[i].resize(SigmaRS.size());
        ˜˜˜˜˜˜˜ ^
Random_v2.cpp:728:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < SigmaSR[i].size(); j++)
                        ˜˜˜˜˜˜˜ ^
Random_v2.cpp:729:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSR[i][j] = SigmaRS[j][i];
          ˜˜˜˜˜˜˜ ^
Random_v2.cpp:729:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSR[i][j] = SigmaRS[j][i];
          ˜˜˜˜˜˜˜    ^
Random_v2.cpp:729:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSR[i][j] = SigmaRS[j][i];
                          ˜˜˜˜˜˜˜ ^
Random_v2.cpp:729:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSR[i][j] = SigmaRS[j][i];
                          ˜˜˜˜˜˜˜    ^
Random_v2.cpp:741:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < SigmaRGivenS[i].size(); j++)
                        ˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:742:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaRR[i][j] += temp6[i][j];
          ˜˜˜˜˜˜˜ ^
Random_v2.cpp:742:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaRR[i][j] += temp6[i][j];
          ˜˜˜˜˜˜˜    ^
Random_v2.cpp:742:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaRR[i][j] += temp6[i][j];
                           ˜˜˜˜˜ ^
Random_v2.cpp:742:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaRR[i][j] += temp6[i][j];
                           ˜˜˜˜˜    ^
Random_v2.cpp:747:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < SigmaSS[i].size(); j++)
                        ˜˜˜˜˜˜˜ ^
Random_v2.cpp:748:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][i][j] = SigmaSS[i][j];
          ˜˜˜˜˜ ^
Random_v2.cpp:748:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][i][j] = SigmaSS[i][j];
          ˜˜˜˜˜    ^
Random_v2.cpp:748:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][i][j] = SigmaSS[i][j];
          ˜˜˜˜˜       ^
Random_v2.cpp:748:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][i][j] = SigmaSS[i][j];
                           ˜˜˜˜˜˜˜ ^
Random_v2.cpp:748:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][i][j] = SigmaSS[i][j];
                           ˜˜˜˜˜˜˜    ^
Random_v2.cpp:750:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < SigmaRR[i].size(); j++)
                        ˜˜˜˜˜˜˜ ^
Random_v2.cpp:751:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][i + SigmaSS.size()][j + SigmaSS.size()] = SigmaRR[i][j];
          ˜˜˜˜˜ ^
Random_v2.cpp:751:13: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
          Sigma[k][i + SigmaSS.size()][j + SigmaSS.size()] = SigmaRR[i][j];
                   ^ ˜
Random_v2.cpp:751:33: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
          Sigma[k][i + SigmaSS.size()][j + SigmaSS.size()] = SigmaRR[i][j];
                                       ^ ˜
Random_v2.cpp:751:63: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][i + SigmaSS.size()][j + SigmaSS.size()] = SigmaRR[i][j];
                                                             ˜˜˜˜˜˜˜ ^
Random_v2.cpp:751:66: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][i + SigmaSS.size()][j + SigmaSS.size()] = SigmaRR[i][j];
                                                             ˜˜˜˜˜˜˜    ^
Random_v2.cpp:754:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][i][j + SigmaSS.size()] = SigmaSR[i][j];
          ˜˜˜˜˜ ^
Random_v2.cpp:754:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][i][j + SigmaSS.size()] = SigmaSR[i][j];
          ˜˜˜˜˜    ^
Random_v2.cpp:754:16: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
          Sigma[k][i][j + SigmaSS.size()] = SigmaSR[i][j];
                      ^ ˜
Random_v2.cpp:754:46: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][i][j + SigmaSS.size()] = SigmaSR[i][j];
                                            ˜˜˜˜˜˜˜ ^
Random_v2.cpp:754:49: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][i][j + SigmaSS.size()] = SigmaSR[i][j];
                                            ˜˜˜˜˜˜˜    ^
Random_v2.cpp:755:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][j + SigmaSS.size()][i] = SigmaRS[j][i];
          ˜˜˜˜˜ ^
Random_v2.cpp:755:13: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
          Sigma[k][j + SigmaSS.size()][i] = SigmaRS[j][i];
                   ^ ˜
Random_v2.cpp:755:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][j + SigmaSS.size()][i] = SigmaRS[j][i];
          ˜˜˜˜˜                        ^
Random_v2.cpp:755:46: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][j + SigmaSS.size()][i] = SigmaRS[j][i];
                                            ˜˜˜˜˜˜˜ ^
Random_v2.cpp:755:49: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][j + SigmaSS.size()][i] = SigmaRS[j][i];
                                            ˜˜˜˜˜˜˜    ^
Random_v2.cpp:759:57: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      vector<vector<double> > temp7(InverseWishart(df,D[k]));
                                                      ˜ ^
Random_v2.cpp:761:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < temp7[i].size(); j++)
                        ˜˜˜˜˜ ^
Random_v2.cpp:762:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][i][j] = temp7[i][j];
          ˜˜˜˜˜ ^
Random_v2.cpp:762:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][i][j] = temp7[i][j];
          ˜˜˜˜˜    ^
Random_v2.cpp:762:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][i][j] = temp7[i][j];
          ˜˜˜˜˜       ^
Random_v2.cpp:762:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][i][j] = temp7[i][j];
                           ˜˜˜˜˜ ^
Random_v2.cpp:762:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Sigma[k][i][j] = temp7[i][j];
                           ˜˜˜˜˜    ^
Random_v2.cpp:790:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  for (k = 0; k < UBlocks[k].size(); k++)
                  ˜˜˜˜˜˜˜ ^
Random_v2.cpp:791:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    UBlocks[k].resize(Cov[k].size());
    ˜˜˜˜˜˜˜ ^
Random_v2.cpp:791:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    UBlocks[k].resize(Cov[k].size());
                      ˜˜˜ ^
Random_v2.cpp:808:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    vec[i] = Norm01();
    ˜˜˜ ^
Random_v2.cpp:813:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    U[i] = vec[i];
    ˜ ^
Random_v2.cpp:813:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    U[i] = vec[i];
           ˜˜˜ ^
Random_v2.cpp:814:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    UBlocks[0][i] = vec[i];
    ˜˜˜˜˜˜˜    ^
Random_v2.cpp:814:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    UBlocks[0][i] = vec[i];
                    ˜˜˜ ^
Random_v2.cpp:823:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    if (oldComponents[k].size() > 0) {
        ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:830:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      CovSS.resize(oldComponents[k].size());
                   ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:831:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      CovRR.resize(Cov[k].size() - oldComponents[k].size());
                   ˜˜˜ ^
Random_v2.cpp:831:50: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      CovRR.resize(Cov[k].size() - oldComponents[k].size());
                                   ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:832:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      CovSR.resize(oldComponents[k].size());
                   ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:833:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      CovRS.resize(Cov[k].size() - oldComponents[k].size());
                   ˜˜˜ ^
Random_v2.cpp:833:50: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      CovRS.resize(Cov[k].size() - oldComponents[k].size());
                                   ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:834:48: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (i = 0; i < CovSS.size(); i++) CovSS[i].resize(CovSS.size());
                                         ˜˜˜˜˜ ^
Random_v2.cpp:835:48: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (i = 0; i < CovRR.size(); i++) CovRR[i].resize(CovRR.size());
                                         ˜˜˜˜˜ ^
Random_v2.cpp:836:48: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (i = 0; i < CovSR.size(); i++) CovSR[i].resize(CovRS.size());
                                         ˜˜˜˜˜ ^
Random_v2.cpp:837:48: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (i = 0; i < CovRS.size(); i++) CovRS[i].resize(CovSR.size());
                                         ˜˜˜˜˜ ^
Random_v2.cpp:841:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < CovSS[i].size(); j++)
                        ˜˜˜˜˜ ^
Random_v2.cpp:842:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovSS[i][j] = Cov[k][i][j];
          ˜˜˜˜˜ ^
Random_v2.cpp:842:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovSS[i][j] = Cov[k][i][j];
          ˜˜˜˜˜    ^
Random_v2.cpp:842:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovSS[i][j] = Cov[k][i][j];
                        ˜˜˜ ^
Random_v2.cpp:842:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovSS[i][j] = Cov[k][i][j];
                        ˜˜˜    ^
Random_v2.cpp:842:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovSS[i][j] = Cov[k][i][j];
                        ˜˜˜       ^
Random_v2.cpp:845:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < CovRR[i].size(); j++)
                        ˜˜˜˜˜ ^
Random_v2.cpp:846:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovRR[i][j] = Cov[k][i + CovSS.size()][j + CovSS.size()];
          ˜˜˜˜˜ ^
Random_v2.cpp:846:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovRR[i][j] = Cov[k][i + CovSS.size()][j + CovSS.size()];
          ˜˜˜˜˜    ^
Random_v2.cpp:846:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovRR[i][j] = Cov[k][i + CovSS.size()][j + CovSS.size()];
                        ˜˜˜ ^
Random_v2.cpp:846:25: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
          CovRR[i][j] = Cov[k][i + CovSS.size()][j + CovSS.size()];
                               ^ ˜
Random_v2.cpp:846:43: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
          CovRR[i][j] = Cov[k][i + CovSS.size()][j + CovSS.size()];
                                                 ^ ˜
Random_v2.cpp:849:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < CovSR[i].size(); j++) {
                        ˜˜˜˜˜ ^
Random_v2.cpp:850:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovSR[i][j] = Cov[k][i][j + CovSS.size()];
          ˜˜˜˜˜ ^
Random_v2.cpp:850:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovSR[i][j] = Cov[k][i][j + CovSS.size()];
          ˜˜˜˜˜    ^
Random_v2.cpp:850:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovSR[i][j] = Cov[k][i][j + CovSS.size()];
                        ˜˜˜ ^
Random_v2.cpp:850:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovSR[i][j] = Cov[k][i][j + CovSS.size()];
                        ˜˜˜    ^
Random_v2.cpp:850:28: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
          CovSR[i][j] = Cov[k][i][j + CovSS.size()];
                                  ^ ˜
Random_v2.cpp:851:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovRS[j][i] = Cov[k][j + CovSS.size()][i];
          ˜˜˜˜˜ ^
Random_v2.cpp:851:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovRS[j][i] = Cov[k][j + CovSS.size()][i];
          ˜˜˜˜˜    ^
Random_v2.cpp:851:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovRS[j][i] = Cov[k][j + CovSS.size()][i];
                        ˜˜˜ ^
Random_v2.cpp:851:25: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
          CovRS[j][i] = Cov[k][j + CovSS.size()][i];
                               ^ ˜
Random_v2.cpp:851:43: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovRS[j][i] = Cov[k][j + CovSS.size()][i];
                        ˜˜˜                      ^
Random_v2.cpp:864:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < CovRGivenS[i].size(); j++)
                        ˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:865:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovRGivenS[i][j] -= temp2[i][j];
          ˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:865:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovRGivenS[i][j] -= temp2[i][j];
          ˜˜˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:865:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovRGivenS[i][j] -= temp2[i][j];
                              ˜˜˜˜˜ ^
Random_v2.cpp:865:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovRGivenS[i][j] -= temp2[i][j];
                              ˜˜˜˜˜    ^
Random_v2.cpp:878:6: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        vec[i] = Norm01();
        ˜˜˜ ^
Random_v2.cpp:885:6: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        obs[i] = UBlocks[oldClique[k]][oldComponents[k][i]];
        ˜˜˜ ^
Random_v2.cpp:885:19: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        obs[i] = UBlocks[oldClique[k]][oldComponents[k][i]];
                 ˜˜˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜˜
Random_v2.cpp:885:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        obs[i] = UBlocks[oldClique[k]][oldComponents[k][i]];
                         ˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:885:33: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        obs[i] = UBlocks[oldClique[k]][oldComponents[k][i]];
                 ˜˜˜˜˜˜˜               ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Random_v2.cpp:885:47: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        obs[i] = UBlocks[oldClique[k]][oldComponents[k][i]];
                                       ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:885:50: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        obs[i] = UBlocks[oldClique[k]][oldComponents[k][i]];
                                       ˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:890:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        z[i] += mean[i];
        ˜ ^
Random_v2.cpp:890:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        z[i] += mean[i];
                ˜˜˜˜ ^
Random_v2.cpp:895:6: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        U[i + first] = z[i];
        ˜ ˜˜^˜˜˜˜˜˜
Random_v2.cpp:895:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        U[i + first] = z[i];
                       ˜ ^
Random_v2.cpp:900:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i] = obs[i];
        ˜˜˜˜˜˜˜ ^
Random_v2.cpp:900:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i] = obs[i];
        ˜˜˜˜˜˜˜    ^
Random_v2.cpp:900:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i] = obs[i];
                        ˜˜˜ ^
Random_v2.cpp:902:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i + obs.size()] = z[i];
        ˜˜˜˜˜˜˜ ^
Random_v2.cpp:902:13: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
        UBlocks[k][i + obs.size()] = z[i];
                   ^ ˜
Random_v2.cpp:902:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i + obs.size()] = z[i];
                                     ˜ ^
Random_v2.cpp:906:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Cholesky chol(Cov[k],err);
                    ˜˜˜ ^
Random_v2.cpp:912:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      vector<double> vec(Cov[k].size(),0.0);
                         ˜˜˜ ^
Random_v2.cpp:914:6: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        vec[i] = Norm01();
        ˜˜˜ ^
Random_v2.cpp:919:6: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        U[i + first] = z[i];
        ˜ ˜˜^˜˜˜˜˜˜
Random_v2.cpp:919:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        U[i + first] = z[i];
                       ˜ ^
Random_v2.cpp:924:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i] = z[i];
        ˜˜˜˜˜˜˜ ^
Random_v2.cpp:924:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i] = z[i];
        ˜˜˜˜˜˜˜    ^
Random_v2.cpp:924:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i] = z[i];
                        ˜ ^
Random_v2.cpp:929:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    U[i] += mean[i];
    ˜ ^
Random_v2.cpp:929:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    U[i] += mean[i];
            ˜˜˜˜ ^
Random_v2.cpp:949:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    UBlocks[k].resize(Omega[k].size());
    ˜˜˜˜˜˜˜ ^
Random_v2.cpp:949:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    UBlocks[k].resize(Omega[k].size());
                      ˜˜˜˜˜ ^
Random_v2.cpp:950:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (i = 0; i < UBlocks[k].size(); i++)
                    ˜˜˜˜˜˜˜ ^
Random_v2.cpp:951:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[k][i].resize(R.size());
      ˜˜˜˜˜˜˜ ^
Random_v2.cpp:951:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[k][i].resize(R.size());
      ˜˜˜˜˜˜˜    ^
Random_v2.cpp:969:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      vec[i] = Norm01();
      ˜˜˜ ^
Random_v2.cpp:974:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      U[i][j] = z[i];
      ˜ ^
Random_v2.cpp:974:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      U[i][j] = z[i];
      ˜    ^
Random_v2.cpp:974:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      U[i][j] = z[i];
                ˜ ^
Random_v2.cpp:979:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[0][i][j] = z[i];
      ˜˜˜˜˜˜˜    ^
Random_v2.cpp:979:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[0][i][j] = z[i];
      ˜˜˜˜˜˜˜       ^
Random_v2.cpp:979:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[0][i][j] = z[i];
                         ˜ ^
Random_v2.cpp:996:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    if (oldComponents[k].size() > 0) {
        ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1003:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      OmegaSS.resize(oldComponents[k].size());
                     ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1004:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      OmegaRR.resize(Omega[k].size() - oldComponents[k].size());
                     ˜˜˜˜˜ ^
Random_v2.cpp:1004:54: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      OmegaRR.resize(Omega[k].size() - oldComponents[k].size());
                                       ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1005:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      OmegaSR.resize(oldComponents[k].size());
                     ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1006:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      OmegaRS.resize(Omega[k].size() - oldComponents[k].size());
                     ˜˜˜˜˜ ^
Random_v2.cpp:1006:54: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      OmegaRS.resize(Omega[k].size() - oldComponents[k].size());
                                       ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1007:52: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (i = 0; i < OmegaSS.size(); i++) OmegaSS[i].resize(OmegaSS.size());
                                           ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1008:52: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (i = 0; i < OmegaRR.size(); i++) OmegaRR[i].resize(OmegaRR.size());
                                           ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1009:52: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (i = 0; i < OmegaSR.size(); i++) OmegaSR[i].resize(OmegaRS.size());
                                           ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1010:52: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (i = 0; i < OmegaRS.size(); i++) OmegaRS[i].resize(OmegaSR.size());
                                           ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1013:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < OmegaSS[i].size(); j++)
                        ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1014:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaSS[i][j] = Omega[k][i][j];
          ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1014:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaSS[i][j] = Omega[k][i][j];
          ˜˜˜˜˜˜˜    ^
Random_v2.cpp:1014:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaSS[i][j] = Omega[k][i][j];
                          ˜˜˜˜˜ ^
Random_v2.cpp:1014:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaSS[i][j] = Omega[k][i][j];
                          ˜˜˜˜˜    ^
Random_v2.cpp:1014:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaSS[i][j] = Omega[k][i][j];
                          ˜˜˜˜˜       ^
Random_v2.cpp:1017:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < OmegaRR[i].size(); j++)
                        ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1018:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaRR[i][j] = Omega[k][i + OmegaSS.size()][j + OmegaSS.size()];
          ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1018:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaRR[i][j] = Omega[k][i + OmegaSS.size()][j + OmegaSS.size()];
          ˜˜˜˜˜˜˜    ^
Random_v2.cpp:1018:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaRR[i][j] = Omega[k][i + OmegaSS.size()][j + OmegaSS.size()];
                          ˜˜˜˜˜ ^
Random_v2.cpp:1018:29: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
          OmegaRR[i][j] = Omega[k][i + OmegaSS.size()][j + OmegaSS.size()];
                                   ^ ˜
Random_v2.cpp:1018:49: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
          OmegaRR[i][j] = Omega[k][i + OmegaSS.size()][j + OmegaSS.size()];
                                                       ^ ˜
Random_v2.cpp:1021:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < OmegaSR[i].size(); j++) {
                        ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1022:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaSR[i][j] = Omega[k][i][j + OmegaSS.size()];
          ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1022:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaSR[i][j] = Omega[k][i][j + OmegaSS.size()];
          ˜˜˜˜˜˜˜    ^
Random_v2.cpp:1022:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaSR[i][j] = Omega[k][i][j + OmegaSS.size()];
                          ˜˜˜˜˜ ^
Random_v2.cpp:1022:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaSR[i][j] = Omega[k][i][j + OmegaSS.size()];
                          ˜˜˜˜˜    ^
Random_v2.cpp:1022:32: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
          OmegaSR[i][j] = Omega[k][i][j + OmegaSS.size()];
                                      ^ ˜
Random_v2.cpp:1023:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaRS[j][i] = Omega[k][j + OmegaSS.size()][i];
          ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1023:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaRS[j][i] = Omega[k][j + OmegaSS.size()][i];
          ˜˜˜˜˜˜˜    ^
Random_v2.cpp:1023:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaRS[j][i] = Omega[k][j + OmegaSS.size()][i];
                          ˜˜˜˜˜ ^
Random_v2.cpp:1023:29: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
          OmegaRS[j][i] = Omega[k][j + OmegaSS.size()][i];
                                   ^ ˜
Random_v2.cpp:1023:49: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaRS[j][i] = Omega[k][j + OmegaSS.size()][i];
                          ˜˜˜˜˜                        ^
Random_v2.cpp:1036:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < OmegaRGivenS[i].size(); j++)
                        ˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1037:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaRGivenS[i][j] -= temp2[i][j];
          ˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1037:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaRGivenS[i][j] -= temp2[i][j];
          ˜˜˜˜˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:1037:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaRGivenS[i][j] -= temp2[i][j];
                                ˜˜˜˜˜ ^
Random_v2.cpp:1037:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaRGivenS[i][j] -= temp2[i][j];
                                ˜˜˜˜˜    ^
Random_v2.cpp:1051:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vec[i] = Norm01();
          ˜˜˜ ^
Random_v2.cpp:1058:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          obs[i] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
          ˜˜˜ ^
Random_v2.cpp:1058:21: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          obs[i] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
                   ˜˜˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜˜
Random_v2.cpp:1058:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          obs[i] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
                           ˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1058:35: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          obs[i] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
                   ˜˜˜˜˜˜˜               ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Random_v2.cpp:1058:49: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          obs[i] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
                                         ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1058:52: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          obs[i] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
                                         ˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:1058:56: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          obs[i] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
                   ˜˜˜˜˜˜˜                                    ^
Random_v2.cpp:1063:6: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          z[i] += mean[i];
          ˜ ^
Random_v2.cpp:1063:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          z[i] += mean[i];
                  ˜˜˜˜ ^
Random_v2.cpp:1068:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          U[i + first][j] = z[i];
          ˜ ˜˜^˜˜˜˜˜˜
Random_v2.cpp:1068:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          U[i + first][j] = z[i];
          ˜            ^
Random_v2.cpp:1068:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          U[i + first][j] = z[i];
                            ˜ ^
Random_v2.cpp:1073:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          UBlocks[k][i][j] = obs[i];
          ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1073:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          UBlocks[k][i][j] = obs[i];
          ˜˜˜˜˜˜˜    ^
Random_v2.cpp:1073:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          UBlocks[k][i][j] = obs[i];
          ˜˜˜˜˜˜˜       ^
Random_v2.cpp:1073:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          UBlocks[k][i][j] = obs[i];
                             ˜˜˜ ^
Random_v2.cpp:1075:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          UBlocks[k][i + obs.size()][j] = z[i];
          ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1075:15: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
          UBlocks[k][i + obs.size()][j] = z[i];
                     ^ ˜
Random_v2.cpp:1075:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          UBlocks[k][i + obs.size()][j] = z[i];
          ˜˜˜˜˜˜˜                    ^
Random_v2.cpp:1075:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          UBlocks[k][i + obs.size()][j] = z[i];
                                          ˜ ^
Random_v2.cpp:1080:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Cholesky chol(Omega[k],err);
                    ˜˜˜˜˜ ^
Random_v2.cpp:1086:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (j = 0; j < U[k].size(); j++) {
                      ˜ ^
Random_v2.cpp:1087:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        vector<double> vec(Omega[k].size(),0.0);
                           ˜˜˜˜˜ ^
Random_v2.cpp:1089:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vec[i] = Norm01();
          ˜˜˜ ^
Random_v2.cpp:1094:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          U[i + first][j] = z[i];
          ˜ ˜˜^˜˜˜˜˜˜
Random_v2.cpp:1094:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          U[i + first][j] = z[i];
          ˜            ^
Random_v2.cpp:1094:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          U[i + first][j] = z[i];
                            ˜ ^
Random_v2.cpp:1096:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        if (j == U[k].size() - 1) first += z.size();
                 ˜ ^
Random_v2.cpp:1099:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          UBlocks[k][i][j] = z[i];
          ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1099:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          UBlocks[k][i][j] = z[i];
          ˜˜˜˜˜˜˜    ^
Random_v2.cpp:1099:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          UBlocks[k][i][j] = z[i];
          ˜˜˜˜˜˜˜       ^
Random_v2.cpp:1099:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          UBlocks[k][i][j] = z[i];
                             ˜ ^
Random_v2.cpp:1134:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    LT[i].resize(L.size());
    ˜˜ ^
Random_v2.cpp:1135:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (j = 0; j < LT[i].size(); j++)
                    ˜˜ ^
Random_v2.cpp:1136:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      LT[i][j] = L[j][i];
      ˜˜ ^
Random_v2.cpp:1136:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      LT[i][j] = L[j][i];
      ˜˜    ^
Random_v2.cpp:1136:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      LT[i][j] = L[j][i];
                 ˜ ^
Random_v2.cpp:1136:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      LT[i][j] = L[j][i];
                 ˜    ^
Random_v2.cpp:1144:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (j = 0; j < U[i].size(); j++)
                    ˜ ^
Random_v2.cpp:1145:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      U[i][j] += mean[i][j];
      ˜ ^
Random_v2.cpp:1145:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      U[i][j] += mean[i][j];
      ˜    ^
Random_v2.cpp:1145:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      U[i][j] += mean[i][j];
                 ˜˜˜˜ ^
Random_v2.cpp:1145:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      U[i][j] += mean[i][j];
                 ˜˜˜˜    ^
Random_v2.cpp:1184:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    pot += PotentialInverseWishart(df,D[k],Sigma[k]);
                                      ˜ ^
Random_v2.cpp:1184:50: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    pot += PotentialInverseWishart(df,D[k],Sigma[k]);
                                           ˜˜˜˜˜ ^
Random_v2.cpp:1189:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    if (oldComponents[k].size() > 0) {
        ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1193:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DSS.resize(oldComponents[k].size());
                 ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1194:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      SigmaSS.resize(oldComponents[k].size());
                     ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1196:44: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (i = 0; i < DSS.size(); i++) DSS[i].resize(DSS.size());
                                       ˜˜˜ ^
Random_v2.cpp:1197:52: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (i = 0; i < SigmaSS.size(); i++) SigmaSS[i].resize(SigmaSS.size());
                                           ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1200:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < DSS[i].size(); j++) {
                        ˜˜˜ ^
Random_v2.cpp:1201:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DSS[i][j] = D[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
          ˜˜˜ ^
Random_v2.cpp:1201:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DSS[i][j] = D[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
          ˜˜˜    ^
Random_v2.cpp:1201:18: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DSS[i][j] = D[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                      ˜ ^˜˜˜˜˜˜˜˜˜˜˜
Random_v2.cpp:1201:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DSS[i][j] = D[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                        ˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1201:32: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DSS[i][j] = D[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                      ˜               ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Random_v2.cpp:1201:46: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DSS[i][j] = D[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                                      ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1201:49: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DSS[i][j] = D[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                                      ˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:1201:53: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DSS[i][j] = D[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                      ˜                                    ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Random_v2.cpp:1201:67: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DSS[i][j] = D[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                                                           ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1201:70: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          DSS[i][j] = D[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                                                           ˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:1202:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
          ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1202:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
          ˜˜˜˜˜˜˜    ^
Random_v2.cpp:1202:26: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                          ˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜˜
Random_v2.cpp:1202:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                                ˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1202:40: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                          ˜˜˜˜˜               ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Random_v2.cpp:1202:54: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                                              ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1202:57: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                                              ˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:1202:61: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                          ˜˜˜˜˜                                    ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Random_v2.cpp:1202:75: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                                                                   ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1202:78: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          SigmaSS[i][j] = Sigma[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                                                                   ˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:1226:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    UU[i] -= mean[i];
    ˜˜ ^
Random_v2.cpp:1226:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    UU[i] -= mean[i];
             ˜˜˜˜ ^
Random_v2.cpp:1233:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    UBlocks[k].resize(Cov[k].size());
    ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1233:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    UBlocks[k].resize(Cov[k].size());
                      ˜˜˜ ^
Random_v2.cpp:1237:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    UBlocks[0][i] = UU[first + i];
    ˜˜˜˜˜˜˜    ^
Random_v2.cpp:1237:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    UBlocks[0][i] = UU[first + i];
                    ˜˜ ˜˜˜˜˜˜^˜˜
Random_v2.cpp:1241:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (i = 0; i < oldComponents[k].size(); i++)
                    ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1242:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[k][i] = UBlocks[oldClique[k]][oldComponents[k][i]];
      ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1242:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[k][i] = UBlocks[oldClique[k]][oldComponents[k][i]];
      ˜˜˜˜˜˜˜    ^
Random_v2.cpp:1242:31: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[k][i] = UBlocks[oldClique[k]][oldComponents[k][i]];
                      ˜˜˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜˜
Random_v2.cpp:1242:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[k][i] = UBlocks[oldClique[k]][oldComponents[k][i]];
                              ˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1242:45: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[k][i] = UBlocks[oldClique[k]][oldComponents[k][i]];
                      ˜˜˜˜˜˜˜               ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Random_v2.cpp:1242:59: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[k][i] = UBlocks[oldClique[k]][oldComponents[k][i]];
                                            ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1242:62: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[k][i] = UBlocks[oldClique[k]][oldComponents[k][i]];
                                            ˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:1244:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (i = 0; i < Cov[k].size() - oldComponents[k].size(); i++)
                    ˜˜˜ ^
Random_v2.cpp:1244:51: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (i = 0; i < Cov[k].size() - oldComponents[k].size(); i++)
                                    ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1245:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[k][i + oldComponents[k].size()] = UU[first + i];
      ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1245:18: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
      UBlocks[k][i + oldComponents[k].size()] = UU[first + i];
                 ^ ˜
Random_v2.cpp:1245:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[k][i + oldComponents[k].size()] = UU[first + i];
                     ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1245:58: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[k][i + oldComponents[k].size()] = UU[first + i];
                                                ˜˜ ˜˜˜˜˜˜^˜˜
Random_v2.cpp:1246:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    first += Cov[k].size() - oldComponents[k].size();
             ˜˜˜ ^
Random_v2.cpp:1246:44: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    first += Cov[k].size() - oldComponents[k].size();
                             ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1252:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    vector<double> zero(UBlocks[k].size(),0.0);
                        ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1253:39: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    pot += PotentialMultiGaussian(Cov[k],zero,UBlocks[k]);
                                  ˜˜˜ ^
Random_v2.cpp:1253:55: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    pot += PotentialMultiGaussian(Cov[k],zero,UBlocks[k]);
                                              ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1259:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    if (oldComponents[k].size() > 0) {
        ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1262:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      CovSub.resize(oldComponents[k].size());
                    ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1263:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      USub.resize(oldComponents[k].size());
                  ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1266:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        CovSub[i].resize(oldComponents[k].size());
        ˜˜˜˜˜˜ ^
Random_v2.cpp:1266:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        CovSub[i].resize(oldComponents[k].size());
                         ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1267:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < CovSub[i].size(); j++)
                        ˜˜˜˜˜˜ ^
Random_v2.cpp:1268:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovSub[i][j] = Cov[k][i][j];
          ˜˜˜˜˜˜ ^
Random_v2.cpp:1268:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovSub[i][j] = Cov[k][i][j];
          ˜˜˜˜˜˜    ^
Random_v2.cpp:1268:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovSub[i][j] = Cov[k][i][j];
                         ˜˜˜ ^
Random_v2.cpp:1268:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovSub[i][j] = Cov[k][i][j];
                         ˜˜˜    ^
Random_v2.cpp:1268:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          CovSub[i][j] = Cov[k][i][j];
                         ˜˜˜       ^
Random_v2.cpp:1272:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        USub[i] = UBlocks[k][i];
        ˜˜˜˜ ^
Random_v2.cpp:1272:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        USub[i] = UBlocks[k][i];
                  ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1272:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        USub[i] = UBlocks[k][i];
                  ˜˜˜˜˜˜˜    ^
Random_v2.cpp:1298:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    XT[i].resize(X.size());
    ˜˜ ^
Random_v2.cpp:1299:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (j = 0; j < XT[i].size(); j++)
                    ˜˜ ^
Random_v2.cpp:1300:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      XT[i][j] = X[j][i];
      ˜˜ ^
Random_v2.cpp:1300:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      XT[i][j] = X[j][i];
      ˜˜    ^
Random_v2.cpp:1300:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      XT[i][j] = X[j][i];
                 ˜ ^
Random_v2.cpp:1300:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      XT[i][j] = X[j][i];
                 ˜    ^
Random_v2.cpp:1311:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    pot += 0.5 * temp3[i][i];
                 ˜˜˜˜˜ ^
Random_v2.cpp:1311:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    pot += 0.5 * temp3[i][i];
                 ˜˜˜˜˜    ^
Random_v2.cpp:1336:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (j = 0; j < UU[i].size(); j++)
                    ˜˜ ^
Random_v2.cpp:1337:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UU[i][j] -= mean[i][j];
      ˜˜ ^
Random_v2.cpp:1337:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UU[i][j] -= mean[i][j];
      ˜˜    ^
Random_v2.cpp:1337:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UU[i][j] -= mean[i][j];
                  ˜˜˜˜ ^
Random_v2.cpp:1337:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UU[i][j] -= mean[i][j];
                  ˜˜˜˜    ^
Random_v2.cpp:1344:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    UBlocks[k].resize(Omega[k].size());
    ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1344:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    UBlocks[k].resize(Omega[k].size());
                      ˜˜˜˜˜ ^
Random_v2.cpp:1345:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (i = 0; i < UBlocks[k].size(); i++)
                    ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1346:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[k][i].resize(R.size());
      ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1346:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[k][i].resize(R.size());
      ˜˜˜˜˜˜˜    ^
Random_v2.cpp:1351:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (j = 0; j < UU[first].size(); j++)
                    ˜˜ ^˜˜˜˜
Random_v2.cpp:1352:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[0][i][j] = UU[first + i][j];
      ˜˜˜˜˜˜˜    ^
Random_v2.cpp:1352:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[0][i][j] = UU[first + i][j];
      ˜˜˜˜˜˜˜       ^
Random_v2.cpp:1352:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[0][i][j] = UU[first + i][j];
                         ˜˜ ˜˜˜˜˜˜^˜˜
Random_v2.cpp:1352:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      UBlocks[0][i][j] = UU[first + i][j];
                         ˜˜            ^
Random_v2.cpp:1356:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (i = 0; i < oldComponents[k].size(); i++)
                    ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1357:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (j = 0; j < UU[first].size(); j++)
                      ˜˜ ^˜˜˜˜
Random_v2.cpp:1358:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i][j] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
        ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1358:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i][j] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
        ˜˜˜˜˜˜˜    ^
Random_v2.cpp:1358:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i][j] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
        ˜˜˜˜˜˜˜       ^
Random_v2.cpp:1358:29: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i][j] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
                           ˜˜˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜˜
Random_v2.cpp:1358:39: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i][j] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
                                   ˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1358:43: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i][j] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
                           ˜˜˜˜˜˜˜               ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Random_v2.cpp:1358:57: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i][j] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
                                                 ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1358:60: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i][j] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
                                                 ˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:1358:64: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i][j] = UBlocks[oldClique[k]][oldComponents[k][i]][j];
                           ˜˜˜˜˜˜˜                                    ^
Random_v2.cpp:1360:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (i = 0; i < Omega[k].size() - oldComponents[k].size(); i++)
                    ˜˜˜˜˜ ^
Random_v2.cpp:1360:53: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (i = 0; i < Omega[k].size() - oldComponents[k].size(); i++)
                                      ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1361:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (j = 0; j < UU[first].size(); j++)
                      ˜˜ ^˜˜˜˜
Random_v2.cpp:1362:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i + oldComponents[k].size()][j] = UU[first + i][j];
        ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1362:13: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
        UBlocks[k][i + oldComponents[k].size()][j] = UU[first + i][j];
                   ^ ˜
Random_v2.cpp:1362:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i + oldComponents[k].size()][j] = UU[first + i][j];
                       ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1362:42: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i + oldComponents[k].size()][j] = UU[first + i][j];
        ˜˜˜˜˜˜˜                                 ^
Random_v2.cpp:1362:56: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i + oldComponents[k].size()][j] = UU[first + i][j];
                                                     ˜˜ ˜˜˜˜˜˜^˜˜
Random_v2.cpp:1362:61: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        UBlocks[k][i + oldComponents[k].size()][j] = UU[first + i][j];
                                                     ˜˜            ^
Random_v2.cpp:1363:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    first += Omega[k].size() - oldComponents[k].size();
             ˜˜˜˜˜ ^
Random_v2.cpp:1363:46: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    first += Omega[k].size() - oldComponents[k].size();
                               ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1381:47: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    pot += PotentialMatrixVariateNormal(Omega[k],R,UBlocks[k]);
                                        ˜˜˜˜˜ ^
Random_v2.cpp:1381:60: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    pot += PotentialMatrixVariateNormal(Omega[k],R,UBlocks[k]);
                                                   ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1386:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    if (oldComponents[k].size() > 0) {
        ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1389:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      OmegaSub.resize(oldComponents[k].size());
                      ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1390:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      USub.resize(oldComponents[k].size());
                  ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1392:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaSub[i].resize(oldComponents[k].size());
        ˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1392:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaSub[i].resize(oldComponents[k].size());
                           ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1393:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < OmegaSub[i].size(); j++)
                        ˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1394:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaSub[i][j] = Omega[k][i][j];
          ˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1394:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaSub[i][j] = Omega[k][i][j];
          ˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:1394:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaSub[i][j] = Omega[k][i][j];
                           ˜˜˜˜˜ ^
Random_v2.cpp:1394:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaSub[i][j] = Omega[k][i][j];
                           ˜˜˜˜˜    ^
Random_v2.cpp:1394:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaSub[i][j] = Omega[k][i][j];
                           ˜˜˜˜˜       ^
Random_v2.cpp:1397:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        USub[i].resize(UBlocks[k][i].size());
        ˜˜˜˜ ^
Random_v2.cpp:1397:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        USub[i].resize(UBlocks[k][i].size());
                       ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1397:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        USub[i].resize(UBlocks[k][i].size());
                       ˜˜˜˜˜˜˜    ^
Random_v2.cpp:1398:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (j = 0; j < USub[i].size(); j++)
                        ˜˜˜˜ ^
Random_v2.cpp:1399:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          USub[i][j] = UBlocks[k][i][j];
          ˜˜˜˜ ^
Random_v2.cpp:1399:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          USub[i][j] = UBlocks[k][i][j];
          ˜˜˜˜    ^
Random_v2.cpp:1399:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          USub[i][j] = UBlocks[k][i][j];
                       ˜˜˜˜˜˜˜ ^
Random_v2.cpp:1399:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          USub[i][j] = UBlocks[k][i][j];
                       ˜˜˜˜˜˜˜    ^
Random_v2.cpp:1399:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          USub[i][j] = UBlocks[k][i][j];
                       ˜˜˜˜˜˜˜       ^
Random_v2.cpp:1509:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  vector<double> diff(n);
                 ˜˜˜˜ ^
Random_v2.cpp:1515:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    diff[i] = x[i] - mean[i];
    ˜˜˜˜ ^
Random_v2.cpp:1515:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    diff[i] = x[i] - mean[i];
              ˜ ^
Random_v2.cpp:1515:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    diff[i] = x[i] - mean[i];
                     ˜˜˜˜ ^
Random_v2.cpp:1507:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int n = x.size();
      ˜   ^˜˜˜˜˜˜˜
Random_v2.cpp:1538:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    diff[i] = x[i] - mean[i];
    ˜˜˜˜ ^
Random_v2.cpp:1538:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    diff[i] = x[i] - mean[i];
              ˜ ^
Random_v2.cpp:1538:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    diff[i] = x[i] - mean[i];
                     ˜˜˜˜ ^
Random_v2.cpp:1542:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    sum += SigmaInv[i][i] * diff[i] * diff[i];
           ˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1542:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    sum += SigmaInv[i][i] * diff[i] * diff[i];
           ˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:1542:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    sum += SigmaInv[i][i] * diff[i] * diff[i];
                            ˜˜˜˜ ^
Random_v2.cpp:1542:44: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    sum += SigmaInv[i][i] * diff[i] * diff[i];
                                      ˜˜˜˜ ^
Random_v2.cpp:1547:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      sum += 2.0 * SigmaInv[i][j] * diff[i] * diff[j];
                   ˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1547:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      sum += 2.0 * SigmaInv[i][j] * diff[i] * diff[j];
                   ˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:1547:42: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      sum += 2.0 * SigmaInv[i][j] * diff[i] * diff[j];
                                    ˜˜˜˜ ^
Random_v2.cpp:1547:52: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      sum += 2.0 * SigmaInv[i][j] * diff[i] * diff[j];
                                              ˜˜˜˜ ^
Random_v2.cpp:1533:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int n = x.size();
      ˜   ^˜˜˜˜˜˜˜
Random_v2.cpp:1565:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  vector<double> diff(n);
                 ˜˜˜˜ ^
Random_v2.cpp:1571:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    diff[i] = x[i];
    ˜˜˜˜ ^
Random_v2.cpp:1571:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    diff[i] = x[i];
              ˜ ^
Random_v2.cpp:1563:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int n = x.size();
      ˜   ^˜˜˜˜˜˜˜
Random_v2.cpp:1593:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    sum += SigmaInv[i][i] * x[i] * x[i];
           ˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1593:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    sum += SigmaInv[i][i] * x[i] * x[i];
           ˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:1593:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    sum += SigmaInv[i][i] * x[i] * x[i];
                            ˜ ^
Random_v2.cpp:1593:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    sum += SigmaInv[i][i] * x[i] * x[i];
                                   ˜ ^
Random_v2.cpp:1598:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      sum += 2.0 * SigmaInv[i][j] * x[i] * x[j];
                   ˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1598:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      sum += 2.0 * SigmaInv[i][j] * x[i] * x[j];
                   ˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:1598:39: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      sum += 2.0 * SigmaInv[i][j] * x[i] * x[j];
                                    ˜ ^
Random_v2.cpp:1598:46: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      sum += 2.0 * SigmaInv[i][j] * x[i] * x[j];
                                           ˜ ^
Random_v2.cpp:1588:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int n = x.size();
      ˜   ^˜˜˜˜˜˜˜
Random_v2.cpp:1678:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    trace += prod[i][i];
             ˜˜˜˜ ^
Random_v2.cpp:1678:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    trace += prod[i][i];
             ˜˜˜˜    ^
Random_v2.cpp:1665:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int m = x.size();
      ˜   ^˜˜˜˜˜˜˜
Random_v2.cpp:1705:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    trace += prod[i][i];
             ˜˜˜˜ ^
Random_v2.cpp:1705:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    trace += prod[i][i];
             ˜˜˜˜    ^
Random_v2.cpp:1698:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int m = x.size();
      ˜   ^˜˜˜˜˜˜˜
Random_v2.cpp:1737:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        fprintf(out,"%20.18e ",x[i][j]);
                               ˜ ^
Random_v2.cpp:1737:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        fprintf(out,"%20.18e ",x[i][j]);
                               ˜    ^
Random_v2.cpp:1749:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    trace += prod[i][i];
             ˜˜˜˜ ^
Random_v2.cpp:1749:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    trace += prod[i][i];
             ˜˜˜˜    ^
Random_v2.cpp:1724:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int m = x.size();
      ˜   ^˜˜˜˜˜˜˜
Random_v2.cpp:1777:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    trace += xInverse[i][i];
             ˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1777:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    trace += xInverse[i][i];
             ˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:1769:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int m = x.size();
      ˜   ^˜˜˜˜˜˜˜
Random_v2.cpp:1802:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    pot += (nu / 2.0) * log(xInverse[i][i]);
                            ˜˜˜˜˜˜˜˜ ^
Random_v2.cpp:1802:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    pot += (nu / 2.0) * log(xInverse[i][i]);
                            ˜˜˜˜˜˜˜˜    ^
Random_v2.cpp:1794:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int m = x.size();
      ˜   ^˜˜˜˜˜˜˜
Random_v2.cpp:1823:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    perm[k] = k;
    ˜˜˜˜ ^
Random_v2.cpp:1828:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      int temp = perm[kk];
                 ˜˜˜˜ ^˜
Random_v2.cpp:1829:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      perm[kk] = perm[k];
      ˜˜˜˜ ^˜
Random_v2.cpp:1829:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      perm[kk] = perm[k];
                 ˜˜˜˜ ^
Random_v2.cpp:1830:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      perm[k] = temp;
      ˜˜˜˜ ^
Random_v2.cpp:1825:24: warning: implicit conversion loses integer precision: 'unsigned long' to 'int' [-Wshorten-64-to-32]
  for (k = perm.size() - 1; k >= 0; k--)
         ˜ ˜˜˜˜˜˜˜˜˜˜˜˜^˜˜
Random_v2.cpp:1847:10: warning: unused variable 'x' [-Wunused-variable]
  double x,y,tt,sum;
         ^
523 warnings generated.
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=native -g -O2 -Wall -pedantic -Wconversion -c Rinterface_v2.cpp -o Rinterface_v2.o
In file included from Rinterface_v2.cpp:2:
In file included from ./Update_v2.h:8:
./Random.h:19:9: warning: 'PI' macro redefined
#define PI         3.14159265
        ^
/Library/Frameworks/R.framework/Resources/include/R_ext/Constants.h:32:9: note: previous definition is here
#define PI             M_PI
        ^
In file included from Rinterface_v2.cpp:2:
In file included from ./Update_v2.h:9:
./Cholesky.h:19:50: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int q_nrows(void) const               { return L.size();};
                                          ˜˜˜˜˜˜ ^˜˜˜˜˜˜˜
./Cholesky.h:20:50: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int q_ncols(void) const               { return L[0].size();};
                                          ˜˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:298:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:325:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:401:15: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    nn.resize(*G);
    ˜˜        ^˜
Rinterface_v2.cpp:403:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (g = 0; g < *G; g++) nn[g].resize(0);
                             ˜˜ ^
Rinterface_v2.cpp:409:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nn[g1].push_back(g2);
      ˜˜ ^˜
Rinterface_v2.cpp:410:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nn[g2].push_back(g1);
      ˜˜ ^˜
Rinterface_v2.cpp:418:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:439:15: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    nn.resize(*G);
    ˜˜        ^˜
Rinterface_v2.cpp:441:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (g = 0; g < *G; g++) nn[g].resize(0);
                             ˜˜ ^
Rinterface_v2.cpp:447:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nn[g1].push_back(g2);
      ˜˜ ^˜
Rinterface_v2.cpp:448:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nn[g2].push_back(g1);
      ˜˜ ^˜
Rinterface_v2.cpp:456:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:477:15: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    nn.resize(*G);
    ˜˜        ^˜
Rinterface_v2.cpp:479:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (g = 0; g < *G; g++) nn[g].resize(0);
                             ˜˜ ^
Rinterface_v2.cpp:485:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nn[g1].push_back(g2);
      ˜˜ ^˜
Rinterface_v2.cpp:486:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nn[g2].push_back(g1);
      ˜˜ ^˜
Rinterface_v2.cpp:494:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:520:15: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    nn.resize(*G);
    ˜˜        ^˜
Rinterface_v2.cpp:522:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (g = 0; g < *G; g++) nn[g].resize(0);
                             ˜˜ ^
Rinterface_v2.cpp:528:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nn[g1].push_back(g2);
      ˜˜ ^˜
Rinterface_v2.cpp:529:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nn[g2].push_back(g1);
      ˜˜ ^˜
Rinterface_v2.cpp:536:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:556:15: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    nn.resize(*G);
    ˜˜        ^˜
Rinterface_v2.cpp:558:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (g = 0; g < *G; g++) nn[g].resize(0);
                             ˜˜ ^
Rinterface_v2.cpp:564:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nn[g1].push_back(g2);
      ˜˜ ^˜
Rinterface_v2.cpp:565:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nn[g2].push_back(g1);
      ˜˜ ^˜
Rinterface_v2.cpp:572:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:878:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:914:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:1017:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:1064:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:1105:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:1143:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:1184:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:1230:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:1272:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:1378:15: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    nn.resize(*G);
    ˜˜        ^˜
Rinterface_v2.cpp:1380:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (g = 0; g < *G; g++) nn[g].resize(0);
                             ˜˜ ^
Rinterface_v2.cpp:1386:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nn[g1].push_back(g2);
      ˜˜ ^˜
Rinterface_v2.cpp:1387:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nn[g2].push_back(g1);
      ˜˜ ^˜
Rinterface_v2.cpp:1394:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:1430:15: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    nn.resize(*G);
    ˜˜        ^˜
Rinterface_v2.cpp:1432:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (g = 0; g < *G; g++) nn[g].resize(0);
                             ˜˜ ^
Rinterface_v2.cpp:1438:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nn[g1].push_back(g2);
      ˜˜ ^˜
Rinterface_v2.cpp:1439:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nn[g2].push_back(g1);
      ˜˜ ^˜
Rinterface_v2.cpp:1446:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:1478:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:1511:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:1545:15: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    nn.resize(*G);
    ˜˜        ^˜
Rinterface_v2.cpp:1547:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (g = 0; g < *G; g++) nn[g].resize(0);
                             ˜˜ ^
Rinterface_v2.cpp:1553:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nn[g1].push_back(g2);
      ˜˜ ^˜
Rinterface_v2.cpp:1554:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nn[g2].push_back(g1);
      ˜˜ ^˜
Rinterface_v2.cpp:1561:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
Rinterface_v2.cpp:1594:15: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    nn.resize(*G);
    ˜˜        ^˜
Rinterface_v2.cpp:1596:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (g = 0; g < *G; g++) nn[g].resize(0);
                             ˜˜ ^
Rinterface_v2.cpp:1602:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nn[g1].push_back(g2);
      ˜˜ ^˜
Rinterface_v2.cpp:1603:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nn[g2].push_back(g1);
      ˜˜ ^˜
Rinterface_v2.cpp:1609:13: warning: implicit conversion changes signedness: 'int' to 'unsigned int' [-Wsign-conversion]
    *seed = (int) seedU;
          ˜ ^˜˜˜˜˜˜˜˜˜˜
61 warnings generated.
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=native -g -O2 -Wall -pedantic -Wconversion -c Structure.cpp -o Structure.o
In file included from Structure.cpp:6:
./Cholesky.h:19:50: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int q_nrows(void) const               { return L.size();};
                                          ˜˜˜˜˜˜ ^˜˜˜˜˜˜˜
./Cholesky.h:20:50: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int q_ncols(void) const               { return L[0].size();};
                                          ˜˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜
In file included from Structure.cpp:11:
./ReportNu.h:57:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          out << str->nu[q][g] << " ";
                 ˜˜˜     ^
./ReportNu.h:57:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          out << str->nu[q][g] << " ";
                 ˜˜˜        ^
./ReportNu.h:68:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            value[nr] = str->nu[q][g];
                        ˜˜˜     ^
./ReportNu.h:68:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            value[nr] = str->nu[q][g];
                        ˜˜˜        ^
In file included from Structure.cpp:12:
./ReportDDelta.h:58:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          out << str->Delta[q][g] << " ";
                 ˜˜˜        ^
./ReportDDelta.h:58:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          out << str->Delta[q][g] << " ";
                 ˜˜˜           ^
./ReportDDelta.h:69:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            value[nr] = str->Delta[q][g];
                        ˜˜˜        ^
./ReportDDelta.h:69:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            value[nr] = str->Delta[q][g];
                        ˜˜˜           ^
In file included from Structure.cpp:13:
./ReportA.h:58:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        out << str->a[q] << " ";
               ˜˜˜    ^
./ReportA.h:68:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          value[nr] = str->a[q];
                      ˜˜˜    ^
In file included from Structure.cpp:14:
./ReportB.h:57:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        out << str->b[q] << " ";
               ˜˜˜    ^
./ReportB.h:67:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          value[nr] = str->b[q];
                      ˜˜˜    ^
In file included from Structure.cpp:17:
./ReportR.h:59:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          out << str->r[i][j] << " ";
                 ˜˜˜    ^
./ReportR.h:59:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          out << str->r[i][j] << " ";
                 ˜˜˜       ^
./ReportR.h:70:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            value[nr] = str->r[i][j];
                        ˜˜˜    ^
./ReportR.h:70:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            value[nr] = str->r[i][j];
                        ˜˜˜       ^
In file included from Structure.cpp:18:
./ReportRho.h:60:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          out << str->rho[i][j] << " ";
                 ˜˜˜      ^
./ReportRho.h:60:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          out << str->rho[i][j] << " ";
                 ˜˜˜         ^
./ReportRho.h:71:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            value[nr] = str->rho[i][j];
                        ˜˜˜      ^
./ReportRho.h:71:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            value[nr] = str->rho[i][j];
                        ˜˜˜         ^
In file included from Structure.cpp:19:
./ReportDelta.h:58:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          out << str->delta[q][g] << " ";
                 ˜˜˜        ^
./ReportDelta.h:58:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          out << str->delta[q][g] << " ";
                 ˜˜˜           ^
./ReportDelta.h:69:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            value[nr] = str->delta[q][g];
                        ˜˜˜        ^
./ReportDelta.h:69:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            value[nr] = str->delta[q][g];
                        ˜˜˜           ^
In file included from Structure.cpp:20:
./ReportXi.h:58:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        out << str->xi[q] << " ";
               ˜˜˜     ^
./ReportXi.h:68:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          value[nr] = str->xi[q];
                      ˜˜˜     ^
In file included from Structure.cpp:21:
./ReportSigma2.h:60:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          out << str->sigma2[q][g] << " ";
                 ˜˜˜         ^
./ReportSigma2.h:60:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          out << str->sigma2[q][g] << " ";
                 ˜˜˜            ^
./ReportSigma2.h:71:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            value[nr] = str->sigma2[q][g];
                        ˜˜˜         ^
./ReportSigma2.h:71:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            value[nr] = str->sigma2[q][g];
                        ˜˜˜            ^
In file included from Structure.cpp:22:
./ReportT.h:58:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        out << str->t[q] << " ";
               ˜˜˜    ^
./ReportT.h:68:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          value[nr] = str->t[q];
                      ˜˜˜    ^
In file included from Structure.cpp:23:
./ReportL.h:58:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        out << str->l[q] << " ";
               ˜˜˜    ^
./ReportL.h:68:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          value[nr] = str->l[q];
                      ˜˜˜    ^
In file included from Structure.cpp:24:
./ReportPhi.h:58:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          out << str->phi[q][g] << " ";
                 ˜˜˜      ^
./ReportPhi.h:58:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          out << str->phi[q][g] << " ";
                 ˜˜˜         ^
./ReportPhi.h:69:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            value[nr] = str->phi[q][g];
                        ˜˜˜      ^
./ReportPhi.h:69:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            value[nr] = str->phi[q][g];
                        ˜˜˜         ^
In file included from Structure.cpp:25:
./ReportTheta.h:58:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        out << str->theta[q] << " ";
               ˜˜˜        ^
./ReportTheta.h:68:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          value[nr] = str->theta[q];
                      ˜˜˜        ^
In file included from Structure.cpp:26:
./ReportLambda.h:58:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        out << str->lambda[q] << " ";
               ˜˜˜         ^
./ReportLambda.h:68:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          value[nr] = str->lambda[q];
                      ˜˜˜         ^
In file included from Structure.cpp:27:
./ReportTau2R.h:58:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        out << str->tau2R[q] << " ";
               ˜˜˜        ^
./ReportTau2R.h:68:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          value[nr] = str->tau2R[q];
                      ˜˜˜        ^
In file included from Structure.cpp:28:
./ReportTau2Rho.h:58:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        out << str->tau2Rho[q] << " ";
               ˜˜˜          ^
./ReportTau2Rho.h:68:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          value[nr] = str->tau2Rho[q];
                      ˜˜˜          ^
In file included from Structure.cpp:29:
./ReportPotential.h:33:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->model[i] = model[i];
    ˜˜˜˜        ^
./ReportPotential.h:33:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->model[i] = model[i];
                     ˜˜˜˜˜ ^
./ReportPotential.h:49:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->model[i] = model[i];
    ˜˜˜˜        ^
./ReportPotential.h:49:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->model[i] = model[i];
                     ˜˜˜˜˜ ^
./ReportPotential.h:70:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        out << model[i]->potential(ran) << " ";
               ˜˜˜˜˜ ^
./ReportPotential.h:80:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          value[nr] = model[i]->potential(ran);
                      ˜˜˜˜˜ ^
In file included from Structure.cpp:30:
./ReportAcceptance.h:33:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->update[i] = update[i];
    ˜˜˜˜         ^
./ReportAcceptance.h:33:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->update[i] = update[i];
                      ˜˜˜˜˜˜ ^
./ReportAcceptance.h:49:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->update[i] = update[i];
    ˜˜˜˜         ^
./ReportAcceptance.h:49:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->update[i] = update[i];
                      ˜˜˜˜˜˜ ^
./ReportAcceptance.h:68:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        out << update[i]->acceptRate() << " ";
               ˜˜˜˜˜˜ ^
./ReportAcceptance.h:78:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          value[nr] = update[i]->acceptRate();
                      ˜˜˜˜˜˜ ^
In file included from Structure.cpp:31:
In file included from ./ReportProbDelta.h:6:
./PotentialDelta.h:60:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (str->delta[q][g] == 1)
                ˜˜˜        ^
./PotentialDelta.h:60:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (str->delta[q][g] == 1)
                ˜˜˜           ^
./PotentialDelta.h:61:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              pot += - log(str->xi[q]);
                           ˜˜˜     ^
./PotentialDelta.h:63:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              pot += - log(1.0 - str->xi[q]);
                                 ˜˜˜     ^
./PotentialDelta.h:71:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          if (str->delta[0][g] == 1)
              ˜˜˜           ^
In file included from Structure.cpp:31:
In file included from ./ReportProbDelta.h:7:
./PotentialDDeltag.h:56:17: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  R.resize(str->Q);
  ˜        ˜˜˜˜˜^
./PotentialDDeltag.h:59:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[q].resize(str->Q);
    ˜ ^
./PotentialDDeltag.h:59:22: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[q].resize(str->Q);
    ˜           ˜˜˜˜˜^
./PotentialDDeltag.h:64:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][p] = str->c2 * str->tau2R[p];
      ˜ ^
./PotentialDDeltag.h:64:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][p] = str->c2 * str->tau2R[p];
      ˜    ^
./PotentialDDeltag.h:64:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][p] = str->c2 * str->tau2R[p];
                          ˜˜˜        ^
./PotentialDDeltag.h:65:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
      ˜ ^
./PotentialDDeltag.h:65:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
      ˜    ^
./PotentialDDeltag.h:65:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
                     ˜˜˜    ^
./PotentialDDeltag.h:65:50: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
                                     ˜˜˜         ^
./PotentialDDeltag.h:65:53: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
                                     ˜˜˜            ^
./PotentialDDeltag.h:71:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] = str->c2;
        ˜ ^
./PotentialDDeltag.h:71:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] = str->c2;
        ˜    ^
./PotentialDDeltag.h:72:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= str->r[p][q];
        ˜ ^
./PotentialDDeltag.h:72:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= str->r[p][q];
        ˜    ^
./PotentialDDeltag.h:72:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= str->r[p][q];
                   ˜˜˜    ^
./PotentialDDeltag.h:72:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= str->r[p][q];
                   ˜˜˜       ^
./PotentialDDeltag.h:73:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
        ˜ ^
./PotentialDDeltag.h:73:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
        ˜    ^
./PotentialDDeltag.h:73:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                        ˜˜˜        ^
./PotentialDDeltag.h:73:45: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                                        ˜˜˜        ^
./PotentialDDeltag.h:74:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
        ˜ ^
./PotentialDDeltag.h:74:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
        ˜    ^
./PotentialDDeltag.h:74:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                              ˜˜˜    ^
./PotentialDDeltag.h:74:52: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                              ˜˜˜         ^
./PotentialDDeltag.h:74:55: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                              ˜˜˜            ^
./PotentialDDeltag.h:74:68: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                   ˜˜˜    ^
./PotentialDDeltag.h:74:89: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                                   ˜˜˜         ^
./PotentialDDeltag.h:74:92: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                                   ˜˜˜            ^
./PotentialDDeltag.h:76:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[q][p] = R[p][q];
        ˜ ^
./PotentialDDeltag.h:76:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[q][p] = R[p][q];
        ˜    ^
./PotentialDDeltag.h:76:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[q][p] = R[p][q];
                  ˜ ^
./PotentialDDeltag.h:76:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[q][p] = R[p][q];
                  ˜    ^
./PotentialDDeltag.h:80:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    value[q] = str->Delta[q][g];
    ˜˜˜˜˜ ^
./PotentialDDeltag.h:80:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    value[q] = str->Delta[q][g];
               ˜˜˜        ^
./PotentialDDeltag.h:80:30: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    value[q] = str->Delta[q][g];
               ˜˜˜           ^
In file included from Structure.cpp:31:
In file included from ./ReportProbDelta.h:8:
./PotentialXqg.h:55:29: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double var0 = str->sigma2[q][g] * str->phi[q][g];
                ˜˜˜         ^
./PotentialXqg.h:55:32: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double var0 = str->sigma2[q][g] * str->phi[q][g];
                ˜˜˜            ^
./PotentialXqg.h:55:46: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double var0 = str->sigma2[q][g] * str->phi[q][g];
                                    ˜˜˜      ^
./PotentialXqg.h:55:49: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double var0 = str->sigma2[q][g] * str->phi[q][g];
                                    ˜˜˜         ^
./PotentialXqg.h:56:29: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double var1 = str->sigma2[q][g] / str->phi[q][g];
                ˜˜˜         ^
./PotentialXqg.h:56:32: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double var1 = str->sigma2[q][g] / str->phi[q][g];
                ˜˜˜            ^
./PotentialXqg.h:56:46: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double var1 = str->sigma2[q][g] / str->phi[q][g];
                                    ˜˜˜      ^
./PotentialXqg.h:56:49: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double var1 = str->sigma2[q][g] / str->phi[q][g];
                                    ˜˜˜         ^
./PotentialXqg.h:57:23: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double mm = str->nu[q][g];
              ˜˜˜     ^
./PotentialXqg.h:57:26: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double mm = str->nu[q][g];
              ˜˜˜        ^
./PotentialXqg.h:59:18: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  if (str->delta[q][g] != 0)
      ˜˜˜        ^
./PotentialXqg.h:59:21: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  if (str->delta[q][g] != 0)
      ˜˜˜           ^
./PotentialXqg.h:62:30: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (s = 0; s < str->S[q]; s++)
                      ˜˜˜    ^
./PotentialXqg.h:66:17: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          if (str->psi[q][s] == 0)
              ˜˜˜      ^
./PotentialXqg.h:66:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          if (str->psi[q][s] == 0)
              ˜˜˜         ^
./PotentialXqg.h:68:31: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              mean = mm - str->Delta[q][g];
                          ˜˜˜        ^
./PotentialXqg.h:68:34: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              mean = mm - str->Delta[q][g];
                          ˜˜˜           ^
./PotentialXqg.h:73:31: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              mean = mm + str->Delta[q][g];
                          ˜˜˜        ^
./PotentialXqg.h:73:34: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              mean = mm + str->Delta[q][g];
                          ˜˜˜           ^
./PotentialXqg.h:79:49: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          pot += ran.PotentialGaussian(var,mean,str->x[q][g][s]);
                                                ˜˜˜    ^
./PotentialXqg.h:79:52: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          pot += ran.PotentialGaussian(var,mean,str->x[q][g][s]);
                                                ˜˜˜       ^
./PotentialXqg.h:79:55: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          pot += ran.PotentialGaussian(var,mean,str->x[q][g][s]);
                                                ˜˜˜          ^
./PotentialXqg.h:86:30: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (s = 0; s < str->S[q]; s++)
                      ˜˜˜    ^
./PotentialXqg.h:88:26: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double var = str->psi[q][s] == 0 ? var0 : var1;
                       ˜˜˜      ^
./PotentialXqg.h:88:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double var = str->psi[q][s] == 0 ? var0 : var1;
                       ˜˜˜         ^
./PotentialXqg.h:92:49: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          pot += ran.PotentialGaussian(var,mean,str->x[q][g][s]);
                                                ˜˜˜    ^
./PotentialXqg.h:92:52: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          pot += ran.PotentialGaussian(var,mean,str->x[q][g][s]);
                                                ˜˜˜       ^
./PotentialXqg.h:92:55: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          pot += ran.PotentialGaussian(var,mean,str->x[q][g][s]);
                                                ˜˜˜          ^
In file included from Structure.cpp:31:
In file included from ./ReportProbDelta.h:9:
./PotentialSum.h:31:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->term[i] = term[i]->copy();
    ˜˜˜˜       ^
./PotentialSum.h:31:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->term[i] = term[i]->copy();
                    ˜˜˜˜ ^
./PotentialSum.h:42:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    delete term[i];
           ˜˜˜˜ ^
./PotentialSum.h:62:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    pot += term[i]->potential(ran);
           ˜˜˜˜ ^
In file included from Structure.cpp:31:
./ReportProbDelta.h:54:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        delete term[i];
               ˜˜˜˜ ^
./ReportProbDelta.h:86:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        delete term[i];
               ˜˜˜˜ ^
./ReportProbDelta.h:97:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    delete model[i];
           ˜˜˜˜˜ ^
./ReportProbDelta.h:114:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        int oldValue = str->delta[q][g];
                       ˜˜˜        ^
./ReportProbDelta.h:114:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        int oldValue = str->delta[q][g];
                       ˜˜˜           ^
./ReportProbDelta.h:116:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        this->str->delta[q][g] = 0;
        ˜˜˜˜             ^
./ReportProbDelta.h:116:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        this->str->delta[q][g] = 0;
        ˜˜˜˜                ^
./ReportProbDelta.h:117:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        pot0 = model[g]->potential(ran);
               ˜˜˜˜˜ ^
./ReportProbDelta.h:118:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        this->str->delta[q][g] = 1;
        ˜˜˜˜             ^
./ReportProbDelta.h:118:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        this->str->delta[q][g] = 1;
        ˜˜˜˜                ^
./ReportProbDelta.h:119:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        pot1 = model[g]->potential(ran);
               ˜˜˜˜˜ ^
./ReportProbDelta.h:128:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        ss->delta[q][g] = oldValue;
        ˜˜        ^
./ReportProbDelta.h:128:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        ss->delta[q][g] = oldValue;
        ˜˜           ^
In file included from Structure.cpp:32:
./ReportDiffexpressed.h:38:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  nOn.resize(str->G);
  ˜˜˜        ˜˜˜˜˜^
./ReportDiffexpressed.h:41:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    nOn[g].resize(3);
    ˜˜˜ ^
./ReportDiffexpressed.h:54:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  nOn.resize(str->G);
  ˜˜˜        ˜˜˜˜˜^
./ReportDiffexpressed.h:57:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    nOn[g].resize(3);
    ˜˜˜ ^
Structure.cpp:52:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  S.resize(Q);
  ˜        ^
Structure.cpp:54:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  vector<string> fileData(Q);
                 ˜˜˜˜˜˜˜˜ ^
Structure.cpp:55:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  vector<string> filePsi(Q);
                 ˜˜˜˜˜˜˜ ^
Structure.cpp:59:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      in >> fileData[q];
            ˜˜˜˜˜˜˜˜ ^
Structure.cpp:66:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      in >> filePsi[q];
            ˜˜˜˜˜˜˜ ^
Structure.cpp:78:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      inData.open(fileData[q].c_str());
                  ˜˜˜˜˜˜˜˜ ^
Structure.cpp:86:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      inPsi.open(filePsi[q].c_str());
                 ˜˜˜˜˜˜˜ ^
Structure.cpp:112:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      S[q] = 0;
      ˜ ^
Structure.cpp:113:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      inData >> S[q];
                ˜ ^
Structure.cpp:160:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      in.open(fileData[q].c_str());
              ˜˜˜˜˜˜˜˜ ^
Structure.cpp:166:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        for (s = 0; s < S[q]; s++)
                        ˜ ^
Structure.cpp:167:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          in >> x[q][g][s];
                ˜ ^
Structure.cpp:167:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          in >> x[q][g][s];
                ˜    ^
Structure.cpp:167:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          in >> x[q][g][s];
                ˜       ^
Structure.cpp:179:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      in.open(filePsi[q].c_str());
              ˜˜˜˜˜˜˜ ^
Structure.cpp:183:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (s = 0; s < S[q]; s++)
                      ˜ ^
Structure.cpp:185:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          in >> psi[q][s];
                ˜˜˜ ^
Structure.cpp:185:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          in >> psi[q][s];
                ˜˜˜    ^
Structure.cpp:211:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  this->S.resize(this->Q);
  ˜˜˜˜           ˜˜˜˜˜˜^
Structure.cpp:214:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->S[q] = S[q];
    ˜˜˜˜    ^
Structure.cpp:230:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (s = 0; s < this->S[q]; s++)
                      ˜˜˜˜    ^
Structure.cpp:232:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          this->x[q][g][s] = x[nr];
          ˜˜˜˜    ^
Structure.cpp:232:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          this->x[q][g][s] = x[nr];
          ˜˜˜˜       ^
Structure.cpp:232:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          this->x[q][g][s] = x[nr];
          ˜˜˜˜          ^
Structure.cpp:242:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (s = 0; s < this->S[q]; s++)
                    ˜˜˜˜    ^
Structure.cpp:244:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        this->psi[q][s] = psi[nr];
        ˜˜˜˜      ^
Structure.cpp:244:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        this->psi[q][s] = psi[nr];
        ˜˜˜˜         ^
Structure.cpp:295:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  x.resize(Q);
  ˜        ^
Structure.cpp:299:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      x[q].resize(G);
      ˜ ^
Structure.cpp:299:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      x[q].resize(G);
      ˜           ^
Structure.cpp:302:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        x[q][g].resize(S[q]);
        ˜ ^
Structure.cpp:302:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        x[q][g].resize(S[q]);
        ˜    ^
Structure.cpp:302:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        x[q][g].resize(S[q]);
        ˜              ^˜˜˜
Structure.cpp:302:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        x[q][g].resize(S[q]);
                       ˜ ^
Structure.cpp:305:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  psi.resize(Q);
  ˜˜˜        ^
Structure.cpp:307:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    psi[q].resize(S[q]);
    ˜˜˜ ^
Structure.cpp:307:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    psi[q].resize(S[q]);
    ˜˜˜           ^˜˜˜
Structure.cpp:307:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    psi[q].resize(S[q]);
                  ˜ ^
Structure.cpp:309:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  nu.resize(Q);
  ˜˜        ^
Structure.cpp:311:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    nu[q].resize(G);
    ˜˜ ^
Structure.cpp:311:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    nu[q].resize(G);
    ˜˜           ^
Structure.cpp:313:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  Delta.resize(Q);
  ˜˜˜˜˜        ^
Structure.cpp:315:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Delta[q].resize(G);
    ˜˜˜˜˜ ^
Structure.cpp:315:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Delta[q].resize(G);
    ˜˜˜˜˜           ^
Structure.cpp:317:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  delta.resize(Q);
  ˜˜˜˜˜        ^
Structure.cpp:319:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    delta[q].resize(G);
    ˜˜˜˜˜ ^
Structure.cpp:319:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    delta[q].resize(G);
    ˜˜˜˜˜           ^
Structure.cpp:320:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  xi.resize(Q);
  ˜˜        ^
Structure.cpp:321:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  a.resize(Q);
  ˜        ^
Structure.cpp:322:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  b.resize(Q);
  ˜        ^
Structure.cpp:323:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  tau2R.resize(Q);
  ˜˜˜˜˜        ^
Structure.cpp:324:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  tau2Rho.resize(Q);
  ˜˜˜˜˜˜˜        ^
Structure.cpp:326:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  sigma2.resize(Q);
  ˜˜˜˜˜˜        ^
Structure.cpp:328:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    sigma2[q].resize(G);
    ˜˜˜˜˜˜ ^
Structure.cpp:328:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    sigma2[q].resize(G);
    ˜˜˜˜˜˜           ^
Structure.cpp:330:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  t.resize(Q);
  ˜        ^
Structure.cpp:331:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  l.resize(Q);
  ˜        ^
Structure.cpp:333:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  phi.resize(Q);
  ˜˜˜        ^
Structure.cpp:335:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    phi[q].resize(G);
    ˜˜˜ ^
Structure.cpp:335:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    phi[q].resize(G);
    ˜˜˜           ^
Structure.cpp:337:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  theta.resize(Q);
  ˜˜˜˜˜        ^
Structure.cpp:338:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  lambda.resize(Q);
  ˜˜˜˜˜˜        ^
Structure.cpp:341:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  r.resize(Q);
  ˜        ^
Structure.cpp:342:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  rho.resize(Q);
  ˜˜˜        ^
Structure.cpp:345:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      r[q].resize(Q);
      ˜ ^
Structure.cpp:345:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      r[q].resize(Q);
      ˜           ^
Structure.cpp:346:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      rho[q].resize(Q);
      ˜˜˜ ^
Structure.cpp:346:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      rho[q].resize(Q);
      ˜˜˜           ^
Structure.cpp:392:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            isneg += (r[p][q] < 0.0);
                      ˜ ^
Structure.cpp:392:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            isneg += (r[p][q] < 0.0);
                      ˜    ^
Structure.cpp:393:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            isneg += (rho[p][q] < 0.0);
                      ˜˜˜ ^
Structure.cpp:393:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            isneg += (rho[p][q] < 0.0);
                      ˜˜˜    ^
Structure.cpp:404:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      tau2R[q] = 1.0;
      ˜˜˜˜˜ ^
Structure.cpp:405:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      tau2Rho[q] = 1.0;
      ˜˜˜˜˜˜˜ ^
Structure.cpp:410:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      t[q] = 1.0;
      ˜ ^
Structure.cpp:411:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      l[q] = 1.0;
      ˜ ^
Structure.cpp:418:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        sigma2[q][g] = ran.InverseGamma(t[q],l[q]);
        ˜˜˜˜˜˜ ^
Structure.cpp:418:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        sigma2[q][g] = ran.InverseGamma(t[q],l[q]);
        ˜˜˜˜˜˜    ^
Structure.cpp:418:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        sigma2[q][g] = ran.InverseGamma(t[q],l[q]);
                                        ˜ ^
Structure.cpp:418:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        sigma2[q][g] = ran.InverseGamma(t[q],l[q]);
                                             ˜ ^
Structure.cpp:423:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      a[q] = ran.Beta(alphaA,betaA);
      ˜ ^
Structure.cpp:424:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      b[q] = ran.Beta(alphaB,betaB);
      ˜ ^
Structure.cpp:431:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma.resize(Q);
      ˜˜˜˜˜        ^
Structure.cpp:433:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[q].resize(Q);
        ˜˜˜˜˜ ^
Structure.cpp:433:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[q].resize(Q);
        ˜˜˜˜˜           ^
Structure.cpp:438:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[p][q] = gamma2;
            ˜˜˜˜˜ ^
Structure.cpp:438:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[p][q] = gamma2;
            ˜˜˜˜˜    ^
Structure.cpp:439:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) Sigma[p][q] *= rho[p][q];
                        ˜˜˜˜˜ ^
Structure.cpp:439:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) Sigma[p][q] *= rho[p][q];
                        ˜˜˜˜˜    ^
Structure.cpp:439:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) Sigma[p][q] *= rho[p][q];
                                       ˜˜˜ ^
Structure.cpp:439:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) Sigma[p][q] *= rho[p][q];
                                       ˜˜˜    ^
Structure.cpp:440:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[p][q] *= sqrt(tau2Rho[p] * tau2Rho[q]);
            ˜˜˜˜˜ ^
Structure.cpp:440:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[p][q] *= sqrt(tau2Rho[p] * tau2Rho[q]);
            ˜˜˜˜˜    ^
Structure.cpp:440:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[p][q] *= sqrt(tau2Rho[p] * tau2Rho[q]);
                                ˜˜˜˜˜˜˜ ^
Structure.cpp:440:47: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[p][q] *= sqrt(tau2Rho[p] * tau2Rho[q]);
                                             ˜˜˜˜˜˜˜ ^
Structure.cpp:441:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[p][q] *= exp(0.5 * (a[q] * log(sigma2[q][g]) + a[p] * log(sigma2[p][g])));
            ˜˜˜˜˜ ^
Structure.cpp:441:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[p][q] *= exp(0.5 * (a[q] * log(sigma2[q][g]) + a[p] * log(sigma2[p][g])));
            ˜˜˜˜˜    ^
Structure.cpp:441:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[p][q] *= exp(0.5 * (a[q] * log(sigma2[q][g]) + a[p] * log(sigma2[p][g])));
                                      ˜ ^
Structure.cpp:441:50: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[p][q] *= exp(0.5 * (a[q] * log(sigma2[q][g]) + a[p] * log(sigma2[p][g])));
                                                 ˜˜˜˜˜˜ ^
Structure.cpp:441:53: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[p][q] *= exp(0.5 * (a[q] * log(sigma2[q][g]) + a[p] * log(sigma2[p][g])));
                                                 ˜˜˜˜˜˜    ^
Structure.cpp:441:61: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[p][q] *= exp(0.5 * (a[q] * log(sigma2[q][g]) + a[p] * log(sigma2[p][g])));
                                                                 ˜ ^
Structure.cpp:441:77: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[p][q] *= exp(0.5 * (a[q] * log(sigma2[q][g]) + a[p] * log(sigma2[p][g])));
                                                                            ˜˜˜˜˜˜ ^
Structure.cpp:441:80: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[p][q] *= exp(0.5 * (a[q] * log(sigma2[q][g]) + a[p] * log(sigma2[p][g])));
                                                                            ˜˜˜˜˜˜    ^
Structure.cpp:447:5: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nu[q][g] = value[q];
        ˜˜ ^
Structure.cpp:447:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nu[q][g] = value[q];
        ˜˜    ^
Structure.cpp:447:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nu[q][g] = value[q];
                   ˜˜˜˜˜ ^
Structure.cpp:454:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R.resize(Q);
      ˜        ^
Structure.cpp:456:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[q].resize(Q);
        ˜ ^
Structure.cpp:456:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[q].resize(Q);
        ˜           ^
Structure.cpp:461:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            R[p][q] = c2;
            ˜ ^
Structure.cpp:461:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            R[p][q] = c2;
            ˜    ^
Structure.cpp:462:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) R[p][q] *= r[p][q];
                        ˜ ^
Structure.cpp:462:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) R[p][q] *= r[p][q];
                        ˜    ^
Structure.cpp:462:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) R[p][q] *= r[p][q];
                                   ˜ ^
Structure.cpp:462:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) R[p][q] *= r[p][q];
                                   ˜    ^
Structure.cpp:463:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            R[p][q] *= sqrt(tau2R[p] * tau2R[q]);
            ˜ ^
Structure.cpp:463:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            R[p][q] *= sqrt(tau2R[p] * tau2R[q]);
            ˜    ^
Structure.cpp:463:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            R[p][q] *= sqrt(tau2R[p] * tau2R[q]);
                            ˜˜˜˜˜ ^
Structure.cpp:463:39: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            R[p][q] *= sqrt(tau2R[p] * tau2R[q]);
                                       ˜˜˜˜˜ ^
Structure.cpp:464:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            R[p][q] *= exp(0.5 * (b[q] * log(sigma2[q][g]) + b[p] * log(sigma2[p][g])));
            ˜ ^
Structure.cpp:464:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            R[p][q] *= exp(0.5 * (b[q] * log(sigma2[q][g]) + b[p] * log(sigma2[p][g])));
            ˜    ^
Structure.cpp:464:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            R[p][q] *= exp(0.5 * (b[q] * log(sigma2[q][g]) + b[p] * log(sigma2[p][g])));
                                  ˜ ^
Structure.cpp:464:46: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            R[p][q] *= exp(0.5 * (b[q] * log(sigma2[q][g]) + b[p] * log(sigma2[p][g])));
                                             ˜˜˜˜˜˜ ^
Structure.cpp:464:49: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            R[p][q] *= exp(0.5 * (b[q] * log(sigma2[q][g]) + b[p] * log(sigma2[p][g])));
                                             ˜˜˜˜˜˜    ^
Structure.cpp:464:57: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            R[p][q] *= exp(0.5 * (b[q] * log(sigma2[q][g]) + b[p] * log(sigma2[p][g])));
                                                             ˜ ^
Structure.cpp:464:73: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            R[p][q] *= exp(0.5 * (b[q] * log(sigma2[q][g]) + b[p] * log(sigma2[p][g])));
                                                                        ˜˜˜˜˜˜ ^
Structure.cpp:464:76: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            R[p][q] *= exp(0.5 * (b[q] * log(sigma2[q][g]) + b[p] * log(sigma2[p][g])));
                                                                        ˜˜˜˜˜˜    ^
Structure.cpp:470:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Delta[q][g] = value[q];
        ˜˜˜˜˜ ^
Structure.cpp:470:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Delta[q][g] = value[q];
        ˜˜˜˜˜    ^
Structure.cpp:470:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Delta[q][g] = value[q];
                      ˜˜˜˜˜ ^
Structure.cpp:476:5: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        xi[q] = ran.Beta(alphaXi,betaXi);
        ˜˜ ^
Structure.cpp:479:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          delta[q][g] = (ran.Unif01() <= xi[q]);
          ˜˜˜˜˜ ^
Structure.cpp:479:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          delta[q][g] = (ran.Unif01() <= xi[q]);
          ˜˜˜˜˜    ^
Structure.cpp:479:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          delta[q][g] = (ran.Unif01() <= xi[q]);
                                         ˜˜ ^
Structure.cpp:485:5: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        xi[q] = xi[0];
        ˜˜ ^
Structure.cpp:490:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            delta[q][g] = dd;
            ˜˜˜˜˜ ^
Structure.cpp:490:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            delta[q][g] = dd;
            ˜˜˜˜˜    ^
Structure.cpp:497:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      theta[q] = 1.0;
      ˜˜˜˜˜ ^
Structure.cpp:498:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      lambda[q] = 1.0;
      ˜˜˜˜˜˜ ^
Structure.cpp:503:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      phi[q][g] = ran.Gamma(theta[q],lambda[q]);
      ˜˜˜ ^
Structure.cpp:503:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      phi[q][g] = ran.Gamma(theta[q],lambda[q]);
      ˜˜˜    ^
Structure.cpp:503:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      phi[q][g] = ran.Gamma(theta[q],lambda[q]);
                            ˜˜˜˜˜ ^
Structure.cpp:503:45: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      phi[q][g] = ran.Gamma(theta[q],lambda[q]);
                                     ˜˜˜˜˜˜ ^
Structure.cpp:526:11: warning: variable length arrays are a C99 feature [-Wvla]
  char buf[bufSize];
          ^
Structure.cpp:536:12: warning: variable length arrays are a C99 feature [-Wvla]
  char var1[bufSize];
           ^
Structure.cpp:537:12: warning: variable length arrays are a C99 feature [-Wvla]
  char var2[bufSize];
           ^
Structure.cpp:538:12: warning: variable length arrays are a C99 feature [-Wvla]
  char var3[bufSize];
           ^
Structure.cpp:539:12: warning: variable length arrays are a C99 feature [-Wvla]
  char var4[bufSize];
           ^
Structure.cpp:528:8: warning: unused variable 'c' [-Wunused-variable]
  char c;
       ^
Structure.cpp:1284:5: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nu[q][g] = Nu[nr];
        ˜˜ ^
Structure.cpp:1284:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nu[q][g] = Nu[nr];
        ˜˜    ^
Structure.cpp:1292:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        this->Delta[q][g] = DDelta[nr];
        ˜˜˜˜        ^
Structure.cpp:1292:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        this->Delta[q][g] = DDelta[nr];
        ˜˜˜˜           ^
Structure.cpp:1299:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      a[q] = A[nr];
      ˜ ^
Structure.cpp:1306:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      b[q] = B[nr];
      ˜ ^
Structure.cpp:1318:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        r[i][j] = R[nr];
        ˜ ^
Structure.cpp:1318:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        r[i][j] = R[nr];
        ˜    ^
Structure.cpp:1319:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        r[j][i] = R[nr];
        ˜ ^
Structure.cpp:1319:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        r[j][i] = R[nr];
        ˜    ^
Structure.cpp:1328:6: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        rho[i][j] = Rho[nr];
        ˜˜˜ ^
Structure.cpp:1328:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        rho[i][j] = Rho[nr];
        ˜˜˜    ^
Structure.cpp:1329:6: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        rho[j][i] = Rho[nr];
        ˜˜˜ ^
Structure.cpp:1329:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        rho[j][i] = Rho[nr];
        ˜˜˜    ^
Structure.cpp:1338:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        delta[q][g] = Delta[nr];
        ˜˜˜˜˜ ^
Structure.cpp:1338:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        delta[q][g] = Delta[nr];
        ˜˜˜˜˜    ^
Structure.cpp:1343:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    xi[q] = Xi[q];
    ˜˜ ^
Structure.cpp:1349:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        sigma2[q][g] = Sigma2[nr];
        ˜˜˜˜˜˜ ^
Structure.cpp:1349:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        sigma2[q][g] = Sigma2[nr];
        ˜˜˜˜˜˜    ^
Structure.cpp:1357:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      t[q] = T[nr];
      ˜ ^
Structure.cpp:1365:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      l[q] = L[nr];
      ˜ ^
Structure.cpp:1374:6: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        phi[q][g] = Phi[nr];
        ˜˜˜ ^
Structure.cpp:1374:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        phi[q][g] = Phi[nr];
        ˜˜˜    ^
Structure.cpp:1382:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      theta[q] = Theta[nr];
      ˜˜˜˜˜ ^
Structure.cpp:1390:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      lambda[q] = Lambda[nr];
      ˜˜˜˜˜˜ ^
Structure.cpp:1398:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      tau2R[q] = Tau2R[nr];
      ˜˜˜˜˜ ^
Structure.cpp:1405:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      tau2Rho[q] = Tau2Rho[nr];
      ˜˜˜˜˜˜˜ ^
Structure.cpp:1430:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Nu[nr] = nu[q][g];
                 ˜˜ ^
Structure.cpp:1430:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Nu[nr] = nu[q][g];
                 ˜˜    ^
Structure.cpp:1438:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DDelta[nr] = this->Delta[q][g];
                     ˜˜˜˜        ^
Structure.cpp:1438:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DDelta[nr] = this->Delta[q][g];
                     ˜˜˜˜           ^
Structure.cpp:1445:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      A[nr] = a[q];
              ˜ ^
Structure.cpp:1452:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      B[nr] = b[q];
              ˜ ^
Structure.cpp:1464:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[nr] = r[i][j];
                ˜ ^
Structure.cpp:1464:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[nr] = r[i][j];
                ˜    ^
Structure.cpp:1473:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Rho[nr] = rho[i][j];
                  ˜˜˜ ^
Structure.cpp:1473:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Rho[nr] = rho[i][j];
                  ˜˜˜    ^
Structure.cpp:1482:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Delta[nr] = delta[q][g];
                    ˜˜˜˜˜ ^
Structure.cpp:1482:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Delta[nr] = delta[q][g];
                    ˜˜˜˜˜    ^
Structure.cpp:1487:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Xi[q] = xi[q];
            ˜˜ ^
Structure.cpp:1493:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma2[nr] = sigma2[q][g];
                     ˜˜˜˜˜˜ ^
Structure.cpp:1493:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma2[nr] = sigma2[q][g];
                     ˜˜˜˜˜˜    ^
Structure.cpp:1501:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      T[nr] = t[q];
              ˜ ^
Structure.cpp:1509:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      L[nr] = l[q];
              ˜ ^
Structure.cpp:1518:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Phi[nr] = phi[q][g];
                  ˜˜˜ ^
Structure.cpp:1518:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Phi[nr] = phi[q][g];
                  ˜˜˜    ^
Structure.cpp:1526:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Theta[nr] = theta[q];
                  ˜˜˜˜˜ ^
Structure.cpp:1534:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Lambda[nr] = lambda[q];
                   ˜˜˜˜˜˜ ^
Structure.cpp:1542:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Tau2R[nr] = tau2R[q];
                  ˜˜˜˜˜ ^
Structure.cpp:1549:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Tau2Rho[nr] = tau2Rho[q];
                    ˜˜˜˜˜˜˜ ^
Structure.cpp:1577:15: warning: variable length arrays are a C99 feature [-Wvla]
      char buf[bufSize];
              ^
Structure.cpp:1587:16: warning: variable length arrays are a C99 feature [-Wvla]
      char var1[bufSize];
               ^
Structure.cpp:1588:16: warning: variable length arrays are a C99 feature [-Wvla]
      char var2[bufSize];
               ^
Structure.cpp:1653:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          nUpdate[line - 1] = value;
          ˜˜˜˜˜˜˜ ˜˜˜˜˜^˜˜
Structure.cpp:1642:8: warning: unused variable 'nRead' [-Wunused-variable]
          int nRead = sscanf(var1,"%d",&value);
              ^
Structure.cpp:1679:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              update[line - 1]->setEpsilon(value);
              ˜˜˜˜˜˜ ˜˜˜˜˜^˜˜
Structure.cpp:1668:12: warning: unused variable 'nRead' [-Wunused-variable]
              int nRead = sscanf(var2,"%le",&value);
                  ^
Structure.cpp:1579:12: warning: unused variable 'c' [-Wunused-variable]
      char c;
           ^
Structure.cpp:1696:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nUpdate[l] = InUpdate[l];
      ˜˜˜˜˜˜˜ ^
Structure.cpp:1697:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      update[l]->setEpsilon(Iepsilon[l]);
      ˜˜˜˜˜˜ ^
Structure.cpp:1726:15: warning: variable length arrays are a C99 feature [-Wvla]
      char buf[bufSize];
              ^
Structure.cpp:1736:15: warning: variable length arrays are a C99 feature [-Wvla]
      char var[bufSize];
              ^
Structure.cpp:1811:17: warning: variable length arrays are a C99 feature [-Wvla]
              char name[bufSize];
                       ^
Structure.cpp:1728:12: warning: unused variable 'c' [-Wunused-variable]
      char c;
           ^
363 warnings generated.
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=native -g -O2 -Wall -pedantic -Wconversion -c Update_v2.cpp -o Update_v2.o
In file included from Update_v2.cpp:8:
./Cholesky.h:19:50: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int q_nrows(void) const               { return L.size();};
                                          ˜˜˜˜˜˜ ^˜˜˜˜˜˜˜
./Cholesky.h:20:50: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int q_ncols(void) const               { return L[0].size();};
                                          ˜˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜
Update_v2.cpp:130:41: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *newNu = (double *) calloc(Q * G,sizeof(double));
                               ˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:290:45: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *newDDelta = (double *) calloc(Q * G,sizeof(double));
                                   ˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:365:45: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
      double *oldValues = (double *) calloc(Q,sizeof(double));
                                     ˜˜˜˜˜˜ ^
Update_v2.cpp:366:45: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
      double *newValues = (double *) calloc(Q,sizeof(double));
                                     ˜˜˜˜˜˜ ^
Update_v2.cpp:392:43: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
      double *newNu = (double *) calloc(Q * G,sizeof(double));
                                 ˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:463:45: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
      double *oldValues = (double *) calloc(Q,sizeof(double));
                                     ˜˜˜˜˜˜ ^
Update_v2.cpp:464:45: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
      double *newValues = (double *) calloc(Q,sizeof(double));
                                     ˜˜˜˜˜˜ ^
Update_v2.cpp:490:47: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
      double *newDDelta = (double *) calloc(Q * G,sizeof(double));
                                     ˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:633:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          on[q] = delta[kqg];
          ˜˜ ^
Update_v2.cpp:646:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            vector<double> DeltaActive(nOn,0.0);
                           ˜˜˜˜˜˜˜˜˜˜˜ ^˜˜
Update_v2.cpp:650:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                if (on[q] == 1)
                    ˜˜ ^
Update_v2.cpp:653:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                    DeltaActive[qq] = Delta[kqg];
                    ˜˜˜˜˜˜˜˜˜˜˜ ^˜
Update_v2.cpp:782:45: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *newDDelta = (double *) calloc(Q * G,sizeof(double));
                                   ˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:849:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      vector<double> nuActive(Q,0.0);
                     ˜˜˜˜˜˜˜˜ ^
Update_v2.cpp:853:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nuActive[q] = nu[kqg];
        ˜˜˜˜˜˜˜˜ ^
Update_v2.cpp:915:41: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *newNu = (double *) calloc(Q * G,sizeof(double));
                               ˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:975:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    oldR.resize(Q);
    ˜˜˜˜        ^
Update_v2.cpp:976:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR.resize(Q);
    ˜˜˜˜        ^
Update_v2.cpp:979:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      oldR[p].resize(Q);
      ˜˜˜˜ ^
Update_v2.cpp:979:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      oldR[p].resize(Q);
      ˜˜˜˜           ^
Update_v2.cpp:980:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newR[p].resize(Q);
      ˜˜˜˜ ^
Update_v2.cpp:980:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newR[p].resize(Q);
      ˜˜˜˜           ^
Update_v2.cpp:983:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      oldR[p][p] = 1.0;
      ˜˜˜˜ ^
Update_v2.cpp:983:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      oldR[p][p] = 1.0;
      ˜˜˜˜    ^
Update_v2.cpp:984:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newR[p][p] = 1.0;
      ˜˜˜˜ ^
Update_v2.cpp:984:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newR[p][p] = 1.0;
      ˜˜˜˜    ^
Update_v2.cpp:987:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        oldR[p][q] = r[kqq];
        ˜˜˜˜ ^
Update_v2.cpp:987:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        oldR[p][q] = r[kqq];
        ˜˜˜˜    ^
Update_v2.cpp:988:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newR[p][q] = r[kqq];
        ˜˜˜˜ ^
Update_v2.cpp:988:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newR[p][q] = r[kqq];
        ˜˜˜˜    ^
Update_v2.cpp:989:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        oldR[q][p] = r[kqq];
        ˜˜˜˜ ^
Update_v2.cpp:989:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        oldR[q][p] = r[kqq];
        ˜˜˜˜    ^
Update_v2.cpp:990:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newR[q][p] = r[kqq];
        ˜˜˜˜ ^
Update_v2.cpp:990:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newR[q][p] = r[kqq];
        ˜˜˜˜    ^
Update_v2.cpp:1001:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    vector<double> prob(Q);
                   ˜˜˜˜ ^
Update_v2.cpp:1003:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      prob[p] = 1.0 / ((double) Q);
      ˜˜˜˜ ^
Update_v2.cpp:1005:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    prob.resize(Q - 1);
    ˜˜˜˜        ˜˜^˜˜
Update_v2.cpp:1007:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      prob[p] = 1.0 / ((double) (Q - 1));
      ˜˜˜˜ ^
Update_v2.cpp:1016:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[pp][qq] = oldR[pp][qq] * exp(u) /
    ˜˜˜˜ ^˜
Update_v2.cpp:1016:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[pp][qq] = oldR[pp][qq] * exp(u) /
    ˜˜˜˜     ^˜
Update_v2.cpp:1016:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[pp][qq] = oldR[pp][qq] * exp(u) /
                   ˜˜˜˜ ^˜
Update_v2.cpp:1016:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[pp][qq] = oldR[pp][qq] * exp(u) /
                   ˜˜˜˜     ^˜
Update_v2.cpp:1017:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      (1 - oldR[pp][qq] + oldR[pp][qq] * exp(u));
           ˜˜˜˜ ^˜
Update_v2.cpp:1017:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      (1 - oldR[pp][qq] + oldR[pp][qq] * exp(u));
           ˜˜˜˜     ^˜
Update_v2.cpp:1017:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      (1 - oldR[pp][qq] + oldR[pp][qq] * exp(u));
                          ˜˜˜˜ ^˜
Update_v2.cpp:1017:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      (1 - oldR[pp][qq] + oldR[pp][qq] * exp(u));
                          ˜˜˜˜     ^˜
Update_v2.cpp:1018:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[qq][pp] = newR[pp][qq];
    ˜˜˜˜ ^˜
Update_v2.cpp:1018:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[qq][pp] = newR[pp][qq];
    ˜˜˜˜     ^˜
Update_v2.cpp:1018:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[qq][pp] = newR[pp][qq];
                   ˜˜˜˜ ^˜
Update_v2.cpp:1018:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[qq][pp] = newR[pp][qq];
                   ˜˜˜˜     ^˜
Update_v2.cpp:1019:56: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *newRVector = (double *) calloc(Q * (Q - 1) / 2,sizeof(double));
                                    ˜˜˜˜˜˜ ˜˜˜˜˜˜˜˜˜˜˜˜^˜˜
Update_v2.cpp:1023:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newRVector[kqq] = newR[p][q];
                          ˜˜˜˜ ^
Update_v2.cpp:1023:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newRVector[kqq] = newR[p][q];
                          ˜˜˜˜    ^
Update_v2.cpp:1037:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      double y = oldR[pp][qq];
                 ˜˜˜˜ ^˜
Update_v2.cpp:1037:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      double y = oldR[pp][qq];
                 ˜˜˜˜     ^˜
Update_v2.cpp:1057:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          isNeg += (newR[p][q] < 0.0);
                    ˜˜˜˜ ^
Update_v2.cpp:1057:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          isNeg += (newR[p][q] < 0.0);
                    ˜˜˜˜    ^
Update_v2.cpp:1065:42: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
        double *newDDelta = (double *) calloc(Q * G,sizeof(double));
                                       ˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:1128:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    oldR.resize(Q);
    ˜˜˜˜        ^
Update_v2.cpp:1129:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR.resize(Q);
    ˜˜˜˜        ^
Update_v2.cpp:1132:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      oldR[p].resize(Q);
      ˜˜˜˜ ^
Update_v2.cpp:1132:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      oldR[p].resize(Q);
      ˜˜˜˜           ^
Update_v2.cpp:1133:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newR[p].resize(Q);
      ˜˜˜˜ ^
Update_v2.cpp:1133:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newR[p].resize(Q);
      ˜˜˜˜           ^
Update_v2.cpp:1136:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      oldR[p][p] = 1.0;
      ˜˜˜˜ ^
Update_v2.cpp:1136:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      oldR[p][p] = 1.0;
      ˜˜˜˜    ^
Update_v2.cpp:1137:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newR[p][p] = 1.0;
      ˜˜˜˜ ^
Update_v2.cpp:1137:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newR[p][p] = 1.0;
      ˜˜˜˜    ^
Update_v2.cpp:1140:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        oldR[p][q] = r[kqq];
        ˜˜˜˜ ^
Update_v2.cpp:1140:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        oldR[p][q] = r[kqq];
        ˜˜˜˜    ^
Update_v2.cpp:1141:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newR[p][q] = r[kqq];
        ˜˜˜˜ ^
Update_v2.cpp:1141:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newR[p][q] = r[kqq];
        ˜˜˜˜    ^
Update_v2.cpp:1142:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        oldR[q][p] = r[kqq];
        ˜˜˜˜ ^
Update_v2.cpp:1142:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        oldR[q][p] = r[kqq];
        ˜˜˜˜    ^
Update_v2.cpp:1143:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newR[q][p] = r[kqq];
        ˜˜˜˜ ^
Update_v2.cpp:1143:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newR[q][p] = r[kqq];
        ˜˜˜˜    ^
Update_v2.cpp:1158:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    vector<double> prob(Q);
                   ˜˜˜˜ ^
Update_v2.cpp:1160:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      prob[p] = 1.0 / ((double) Q);
      ˜˜˜˜ ^
Update_v2.cpp:1162:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    prob.resize(Q - 1);
    ˜˜˜˜        ˜˜^˜˜
Update_v2.cpp:1164:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      prob[p] = 1.0 / ((double) (Q - 1));
      ˜˜˜˜ ^
Update_v2.cpp:1173:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[pp][qq] = oldR[pp][qq] * exp(u) /
    ˜˜˜˜ ^˜
Update_v2.cpp:1173:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[pp][qq] = oldR[pp][qq] * exp(u) /
    ˜˜˜˜     ^˜
Update_v2.cpp:1173:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[pp][qq] = oldR[pp][qq] * exp(u) /
                   ˜˜˜˜ ^˜
Update_v2.cpp:1173:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[pp][qq] = oldR[pp][qq] * exp(u) /
                   ˜˜˜˜     ^˜
Update_v2.cpp:1174:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      (1 - oldR[pp][qq] + oldR[pp][qq] * exp(u));
           ˜˜˜˜ ^˜
Update_v2.cpp:1174:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      (1 - oldR[pp][qq] + oldR[pp][qq] * exp(u));
           ˜˜˜˜     ^˜
Update_v2.cpp:1174:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      (1 - oldR[pp][qq] + oldR[pp][qq] * exp(u));
                          ˜˜˜˜ ^˜
Update_v2.cpp:1174:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      (1 - oldR[pp][qq] + oldR[pp][qq] * exp(u));
                          ˜˜˜˜     ^˜
Update_v2.cpp:1175:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[qq][pp] = newR[pp][qq];
    ˜˜˜˜ ^˜
Update_v2.cpp:1175:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[qq][pp] = newR[pp][qq];
    ˜˜˜˜     ^˜
Update_v2.cpp:1175:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[qq][pp] = newR[pp][qq];
                   ˜˜˜˜ ^˜
Update_v2.cpp:1175:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[qq][pp] = newR[pp][qq];
                   ˜˜˜˜     ^˜
Update_v2.cpp:1176:56: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *newRVector = (double *) calloc(Q * (Q - 1) / 2,sizeof(double));
                                    ˜˜˜˜˜˜ ˜˜˜˜˜˜˜˜˜˜˜˜^˜˜
Update_v2.cpp:1180:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newRVector[kqq] = newR[p][q];
                          ˜˜˜˜ ^
Update_v2.cpp:1180:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newRVector[kqq] = newR[p][q];
                          ˜˜˜˜    ^
Update_v2.cpp:1195:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      double y = oldR[pp][qq];
                 ˜˜˜˜ ^˜
Update_v2.cpp:1195:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      double y = oldR[pp][qq];
                 ˜˜˜˜     ^˜
Update_v2.cpp:1215:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          isNeg += (newR[p][q] < 0.0);
                    ˜˜˜˜ ^
Update_v2.cpp:1215:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          isNeg += (newR[p][q] < 0.0);
                    ˜˜˜˜    ^
Update_v2.cpp:1236:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              on[q] = delta[kqg];
              ˜˜ ^
Update_v2.cpp:1250:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            vector<double> DeltaActive(nOn,0.0);
                           ˜˜˜˜˜˜˜˜˜˜˜ ^˜˜
Update_v2.cpp:1254:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                if (on[q] == 1)
                    ˜˜ ^
Update_v2.cpp:1257:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                    DeltaActive[qq] = Delta[kqg];
                    ˜˜˜˜˜˜˜˜˜˜˜ ^˜
Update_v2.cpp:1291:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              on[q] = delta[kqg];
              ˜˜ ^
Update_v2.cpp:1305:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            vector<double> DeltaActive(nOn,0.0);
                           ˜˜˜˜˜˜˜˜˜˜˜ ^˜˜
Update_v2.cpp:1309:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                if (on[q] == 1)
                    ˜˜ ^
Update_v2.cpp:1312:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                    DeltaActive[qq] = Delta[kqg];
                    ˜˜˜˜˜˜˜˜˜˜˜ ^˜
Update_v2.cpp:1387:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     oldRho.resize(Q);
     ˜˜˜˜˜˜        ^
Update_v2.cpp:1388:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     newRho.resize(Q);
     ˜˜˜˜˜˜        ^
Update_v2.cpp:1391:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       oldRho[p].resize(Q);
       ˜˜˜˜˜˜ ^
Update_v2.cpp:1391:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       oldRho[p].resize(Q);
       ˜˜˜˜˜˜           ^
Update_v2.cpp:1392:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       newRho[p].resize(Q);
       ˜˜˜˜˜˜ ^
Update_v2.cpp:1392:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       newRho[p].resize(Q);
       ˜˜˜˜˜˜           ^
Update_v2.cpp:1395:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       oldRho[p][p] = 1.0;
       ˜˜˜˜˜˜ ^
Update_v2.cpp:1395:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       oldRho[p][p] = 1.0;
       ˜˜˜˜˜˜    ^
Update_v2.cpp:1396:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       newRho[p][p] = 1.0;
       ˜˜˜˜˜˜ ^
Update_v2.cpp:1396:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       newRho[p][p] = 1.0;
       ˜˜˜˜˜˜    ^
Update_v2.cpp:1400:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
           oldRho[p][q] = rho[kqq];
           ˜˜˜˜˜˜ ^
Update_v2.cpp:1400:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
           oldRho[p][q] = rho[kqq];
           ˜˜˜˜˜˜    ^
Update_v2.cpp:1401:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
           newRho[p][q] = rho[kqq];
           ˜˜˜˜˜˜ ^
Update_v2.cpp:1401:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
           newRho[p][q] = rho[kqq];
           ˜˜˜˜˜˜    ^
Update_v2.cpp:1402:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
           oldRho[q][p] = rho[kqq];
           ˜˜˜˜˜˜ ^
Update_v2.cpp:1402:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
           oldRho[q][p] = rho[kqq];
           ˜˜˜˜˜˜    ^
Update_v2.cpp:1403:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
           newRho[q][p] = rho[kqq];
           ˜˜˜˜˜˜ ^
Update_v2.cpp:1403:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
           newRho[q][p] = rho[kqq];
           ˜˜˜˜˜˜    ^
Update_v2.cpp:1414:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     vector<double> prob(Q);
                    ˜˜˜˜ ^
Update_v2.cpp:1416:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       prob[p] = 1.0 / ((double) Q);
       ˜˜˜˜ ^
Update_v2.cpp:1418:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     prob.resize(Q - 1);
     ˜˜˜˜        ˜˜^˜˜
Update_v2.cpp:1420:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       prob[p] = 1.0 / ((double) (Q - 1));
       ˜˜˜˜ ^
Update_v2.cpp:1429:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     newRho[pp][qq] = oldRho[pp][qq] * exp(u) /
     ˜˜˜˜˜˜ ^˜
Update_v2.cpp:1429:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     newRho[pp][qq] = oldRho[pp][qq] * exp(u) /
     ˜˜˜˜˜˜     ^˜
Update_v2.cpp:1429:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     newRho[pp][qq] = oldRho[pp][qq] * exp(u) /
                      ˜˜˜˜˜˜ ^˜
Update_v2.cpp:1429:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     newRho[pp][qq] = oldRho[pp][qq] * exp(u) /
                      ˜˜˜˜˜˜     ^˜
Update_v2.cpp:1430:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       (1 - oldRho[pp][qq] + oldRho[pp][qq] * exp(u));
            ˜˜˜˜˜˜ ^˜
Update_v2.cpp:1430:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       (1 - oldRho[pp][qq] + oldRho[pp][qq] * exp(u));
            ˜˜˜˜˜˜     ^˜
Update_v2.cpp:1430:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       (1 - oldRho[pp][qq] + oldRho[pp][qq] * exp(u));
                             ˜˜˜˜˜˜ ^˜
Update_v2.cpp:1430:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       (1 - oldRho[pp][qq] + oldRho[pp][qq] * exp(u));
                             ˜˜˜˜˜˜     ^˜
Update_v2.cpp:1431:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     newRho[qq][pp] = newRho[pp][qq];
     ˜˜˜˜˜˜ ^˜
Update_v2.cpp:1431:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     newRho[qq][pp] = newRho[pp][qq];
     ˜˜˜˜˜˜     ^˜
Update_v2.cpp:1431:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     newRho[qq][pp] = newRho[pp][qq];
                      ˜˜˜˜˜˜ ^˜
Update_v2.cpp:1431:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     newRho[qq][pp] = newRho[pp][qq];
                      ˜˜˜˜˜˜     ^˜
Update_v2.cpp:1432:59: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
     double *newRhoVector = (double *) calloc(Q * (Q - 1) / 2,sizeof(double));
                                       ˜˜˜˜˜˜ ˜˜˜˜˜˜˜˜˜˜˜˜^˜˜
Update_v2.cpp:1436:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
         newRhoVector[kqq] = newRho[p][q];
                             ˜˜˜˜˜˜ ^
Update_v2.cpp:1436:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
         newRhoVector[kqq] = newRho[p][q];
                             ˜˜˜˜˜˜    ^
Update_v2.cpp:1450:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       double y = oldRho[pp][qq];
                  ˜˜˜˜˜˜ ^˜
Update_v2.cpp:1450:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       double y = oldRho[pp][qq];
                  ˜˜˜˜˜˜     ^˜
Update_v2.cpp:1470:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
           isNeg += (newRho[p][q] < 0.0);
                     ˜˜˜˜˜˜ ^
Update_v2.cpp:1470:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
           isNeg += (newRho[p][q] < 0.0);
                     ˜˜˜˜˜˜    ^
Update_v2.cpp:1478:39: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
         double *newNu = (double *) calloc(Q * G,sizeof(double));
                                    ˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:1538:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     oldRho.resize(Q);
     ˜˜˜˜˜˜        ^
Update_v2.cpp:1539:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     newRho.resize(Q);
     ˜˜˜˜˜˜        ^
Update_v2.cpp:1542:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       oldRho[p].resize(Q);
       ˜˜˜˜˜˜ ^
Update_v2.cpp:1542:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       oldRho[p].resize(Q);
       ˜˜˜˜˜˜           ^
Update_v2.cpp:1543:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       newRho[p].resize(Q);
       ˜˜˜˜˜˜ ^
Update_v2.cpp:1543:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       newRho[p].resize(Q);
       ˜˜˜˜˜˜           ^
Update_v2.cpp:1546:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       oldRho[p][p] = 1.0;
       ˜˜˜˜˜˜ ^
Update_v2.cpp:1546:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       oldRho[p][p] = 1.0;
       ˜˜˜˜˜˜    ^
Update_v2.cpp:1547:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       newRho[p][p] = 1.0;
       ˜˜˜˜˜˜ ^
Update_v2.cpp:1547:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       newRho[p][p] = 1.0;
       ˜˜˜˜˜˜    ^
Update_v2.cpp:1550:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
         oldRho[p][q] = rho[kqq];
         ˜˜˜˜˜˜ ^
Update_v2.cpp:1550:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
         oldRho[p][q] = rho[kqq];
         ˜˜˜˜˜˜    ^
Update_v2.cpp:1551:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
         newRho[p][q] = rho[kqq];
         ˜˜˜˜˜˜ ^
Update_v2.cpp:1551:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
         newRho[p][q] = rho[kqq];
         ˜˜˜˜˜˜    ^
Update_v2.cpp:1552:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
         oldRho[q][p] = rho[kqq];
         ˜˜˜˜˜˜ ^
Update_v2.cpp:1552:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
         oldRho[q][p] = rho[kqq];
         ˜˜˜˜˜˜    ^
Update_v2.cpp:1553:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
         newRho[q][p] = rho[kqq];
         ˜˜˜˜˜˜ ^
Update_v2.cpp:1553:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
         newRho[q][p] = rho[kqq];
         ˜˜˜˜˜˜    ^
Update_v2.cpp:1564:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     vector<double> prob(Q);
                    ˜˜˜˜ ^
Update_v2.cpp:1566:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       prob[p] = 1.0 / ((double) Q);
       ˜˜˜˜ ^
Update_v2.cpp:1568:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     prob.resize(Q - 1);
     ˜˜˜˜        ˜˜^˜˜
Update_v2.cpp:1570:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       prob[p] = 1.0 / ((double) (Q - 1));
       ˜˜˜˜ ^
Update_v2.cpp:1579:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     newRho[pp][qq] = oldRho[pp][qq] * exp(u) /
     ˜˜˜˜˜˜ ^˜
Update_v2.cpp:1579:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     newRho[pp][qq] = oldRho[pp][qq] * exp(u) /
     ˜˜˜˜˜˜     ^˜
Update_v2.cpp:1579:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     newRho[pp][qq] = oldRho[pp][qq] * exp(u) /
                      ˜˜˜˜˜˜ ^˜
Update_v2.cpp:1579:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     newRho[pp][qq] = oldRho[pp][qq] * exp(u) /
                      ˜˜˜˜˜˜     ^˜
Update_v2.cpp:1580:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       (1 - oldRho[pp][qq] + oldRho[pp][qq] * exp(u));
            ˜˜˜˜˜˜ ^˜
Update_v2.cpp:1580:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       (1 - oldRho[pp][qq] + oldRho[pp][qq] * exp(u));
            ˜˜˜˜˜˜     ^˜
Update_v2.cpp:1580:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       (1 - oldRho[pp][qq] + oldRho[pp][qq] * exp(u));
                             ˜˜˜˜˜˜ ^˜
Update_v2.cpp:1580:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
       (1 - oldRho[pp][qq] + oldRho[pp][qq] * exp(u));
                             ˜˜˜˜˜˜     ^˜
Update_v2.cpp:1581:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     newRho[qq][pp] = newRho[pp][qq];
     ˜˜˜˜˜˜ ^˜
Update_v2.cpp:1581:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     newRho[qq][pp] = newRho[pp][qq];
     ˜˜˜˜˜˜     ^˜
Update_v2.cpp:1581:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     newRho[qq][pp] = newRho[pp][qq];
                      ˜˜˜˜˜˜ ^˜
Update_v2.cpp:1581:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     newRho[qq][pp] = newRho[pp][qq];
                      ˜˜˜˜˜˜     ^˜
Update_v2.cpp:1582:59: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
     double *newRhoVector = (double *) calloc(Q * (Q - 1) / 2,sizeof(double));
                                       ˜˜˜˜˜˜ ˜˜˜˜˜˜˜˜˜˜˜˜^˜˜
Update_v2.cpp:1586:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
         newRhoVector[kqq] = newRho[p][q];
                             ˜˜˜˜˜˜ ^
Update_v2.cpp:1586:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
         newRhoVector[kqq] = newRho[p][q];
                             ˜˜˜˜˜˜    ^
Update_v2.cpp:1600:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      double y = oldRho[pp][qq];
                 ˜˜˜˜˜˜ ^˜
Update_v2.cpp:1600:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      double y = oldRho[pp][qq];
                 ˜˜˜˜˜˜     ^˜
Update_v2.cpp:1620:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          isNeg += (newRho[p][q] < 0.0);
                    ˜˜˜˜˜˜ ^
Update_v2.cpp:1620:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          isNeg += (newRho[p][q] < 0.0);
                    ˜˜˜˜˜˜    ^
Update_v2.cpp:1641:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vector<double> nuActive(Q,0.0);
                         ˜˜˜˜˜˜˜˜ ^
Update_v2.cpp:1644:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            nuActive[q] = nu[kqg];
            ˜˜˜˜˜˜˜˜ ^
Update_v2.cpp:1668:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vector<double> nuActive(Q);
                         ˜˜˜˜˜˜˜˜ ^
Update_v2.cpp:1671:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            nuActive[q] = nu[kqg];
            ˜˜˜˜˜˜˜˜ ^
Update_v2.cpp:1772:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      on[qq] = delta[index];
      ˜˜ ^˜
Update_v2.cpp:1867:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      on[qq] = delta[index];
      ˜˜ ^˜
Update_v2.cpp:2396:45: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *newDDelta = (double *) calloc(Q * G,sizeof(double));
                                   ˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:2487:45: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *newDDelta = (double *) calloc(Q * G,sizeof(double));
                                   ˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:2586:43: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *oldSigma2 = (double *) calloc(G,sizeof(double));
                                   ˜˜˜˜˜˜ ^
Update_v2.cpp:2587:43: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *newSigma2 = (double *) calloc(G,sizeof(double));
                                   ˜˜˜˜˜˜ ^
Update_v2.cpp:2607:5: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        on[qq] = delta[index];
        ˜˜ ^˜
Update_v2.cpp:2631:5: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        on[qq] = delta[index];
        ˜˜ ^˜
Update_v2.cpp:2715:43: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *oldSigma2 = (double *) calloc(G,sizeof(double));
                                   ˜˜˜˜˜˜ ^
Update_v2.cpp:2716:43: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *newSigma2 = (double *) calloc(G,sizeof(double));
                                   ˜˜˜˜˜˜ ^
Update_v2.cpp:2736:5: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        on[qq] = delta[index];
        ˜˜ ^˜
Update_v2.cpp:2760:5: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        on[qq] = delta[index];
        ˜˜ ^˜
Update_v2.cpp:2843:43: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *oldSigma2 = (double *) calloc(G,sizeof(double));
                                   ˜˜˜˜˜˜ ^
Update_v2.cpp:2844:43: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *newSigma2 = (double *) calloc(G,sizeof(double));
                                   ˜˜˜˜˜˜ ^
Update_v2.cpp:2864:5: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        on[qq] = delta[index];
        ˜˜ ^˜
Update_v2.cpp:2888:5: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        on[qq] = delta[index];
        ˜˜ ^˜
Update_v2.cpp:2972:43: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *oldSigma2 = (double *) calloc(G,sizeof(double));
                                   ˜˜˜˜˜˜ ^
Update_v2.cpp:2973:43: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *newSigma2 = (double *) calloc(G,sizeof(double));
                                   ˜˜˜˜˜˜ ^
Update_v2.cpp:2993:5: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        on[qq] = delta[index];
        ˜˜ ^˜
Update_v2.cpp:3018:5: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        on[qq] = delta[index];
        ˜˜ ^˜
Update_v2.cpp:3093:40: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *oldPhi = (double *) calloc(G,sizeof(double));
                                ˜˜˜˜˜˜ ^
Update_v2.cpp:3094:40: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *newPhi = (double *) calloc(G,sizeof(double));
                                ˜˜˜˜˜˜ ^
Update_v2.cpp:3195:40: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *oldPhi = (double *) calloc(G,sizeof(double));
                                ˜˜˜˜˜˜ ^
Update_v2.cpp:3196:40: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *newPhi = (double *) calloc(G,sizeof(double));
                                ˜˜˜˜˜˜ ^
Update_v2.cpp:3317:45: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *newDDelta = (double *) calloc(Q * G,sizeof(double));
                                   ˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:3428:45: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *newDDelta = (double *) calloc(Q * G,sizeof(double));
                                   ˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:3525:45: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *newDDelta = (double *) calloc(Q * G,sizeof(double));
                                   ˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:3675:30: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    int *dd = (int *) calloc(G,sizeof(int));
                      ˜˜˜˜˜˜ ^
Update_v2.cpp:3676:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    vector<double> potZero(G,0.0);
                   ˜˜˜˜˜˜˜ ^
Update_v2.cpp:3682:39: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    int *deltaTemp = (int *) calloc(Q * G,sizeof(int));
                             ˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:3765:30: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    int *dd = (int *) calloc(G,sizeof(int));
                      ˜˜˜˜˜˜ ^
Update_v2.cpp:3766:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    vector<double> potZero(G,0.0);
                   ˜˜˜˜˜˜˜ ^
Update_v2.cpp:3772:39: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    int *deltaTemp = (int *) calloc(Q * G,sizeof(int));
                             ˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:3858:32: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    int *dd = (int *) calloc(Q * G,sizeof(int));
                      ˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:3859:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    vector<double> potZero(Q * G,0.0);
                   ˜˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:3919:10: warning: unused variable 'pot' [-Wunused-variable]
  double pot = - OmegaGibbs(df,D,oldClique,oldComponents,Q,G,Delta,
         ^
Update_v2.cpp:3971:43: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
  double *newValues = (double *) calloc(Q * G,sizeof(double));
                                 ˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:3973:10: warning: unused variable 'pot' [-Wunused-variable]
  double pot = DeltaStarGibbs(oldClique,oldComponents,Q,G,S,newValues,
         ^
Update_v2.cpp:4040:45: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
      double *oldValues = (double *) calloc(Q,sizeof(double));
                                     ˜˜˜˜˜˜ ^
Update_v2.cpp:4041:45: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
      double *newValues = (double *) calloc(Q,sizeof(double));
                                     ˜˜˜˜˜˜ ^
Update_v2.cpp:4067:47: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
      double *newDDelta = (double *) calloc(Q * G,sizeof(double));
                                     ˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:4238:45: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *newDDelta = (double *) calloc(Q * G,sizeof(double));
                                   ˜˜˜˜˜˜ ˜˜^˜˜
Update_v2.cpp:4313:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    oldR.resize(Q);
    ˜˜˜˜        ^
Update_v2.cpp:4314:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR.resize(Q);
    ˜˜˜˜        ^
Update_v2.cpp:4317:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      oldR[p].resize(Q);
      ˜˜˜˜ ^
Update_v2.cpp:4317:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      oldR[p].resize(Q);
      ˜˜˜˜           ^
Update_v2.cpp:4318:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newR[p].resize(Q);
      ˜˜˜˜ ^
Update_v2.cpp:4318:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newR[p].resize(Q);
      ˜˜˜˜           ^
Update_v2.cpp:4321:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      oldR[p][p] = 1.0;
      ˜˜˜˜ ^
Update_v2.cpp:4321:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      oldR[p][p] = 1.0;
      ˜˜˜˜    ^
Update_v2.cpp:4322:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newR[p][p] = 1.0;
      ˜˜˜˜ ^
Update_v2.cpp:4322:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newR[p][p] = 1.0;
      ˜˜˜˜    ^
Update_v2.cpp:4325:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        oldR[p][q] = r[kqq];
        ˜˜˜˜ ^
Update_v2.cpp:4325:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        oldR[p][q] = r[kqq];
        ˜˜˜˜    ^
Update_v2.cpp:4326:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newR[p][q] = r[kqq];
        ˜˜˜˜ ^
Update_v2.cpp:4326:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newR[p][q] = r[kqq];
        ˜˜˜˜    ^
Update_v2.cpp:4327:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        oldR[q][p] = r[kqq];
        ˜˜˜˜ ^
Update_v2.cpp:4327:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        oldR[q][p] = r[kqq];
        ˜˜˜˜    ^
Update_v2.cpp:4328:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newR[q][p] = r[kqq];
        ˜˜˜˜ ^
Update_v2.cpp:4328:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newR[q][p] = r[kqq];
        ˜˜˜˜    ^
Update_v2.cpp:4339:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    vector<double> prob(Q);
                   ˜˜˜˜ ^
Update_v2.cpp:4341:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      prob[p] = 1.0 / ((double) Q);
      ˜˜˜˜ ^
Update_v2.cpp:4343:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    prob.resize(Q - 1);
    ˜˜˜˜        ˜˜^˜˜
Update_v2.cpp:4345:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      prob[p] = 1.0 / ((double) (Q - 1));
      ˜˜˜˜ ^
Update_v2.cpp:4354:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[pp][qq] = oldR[pp][qq] * exp(u) /
    ˜˜˜˜ ^˜
Update_v2.cpp:4354:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[pp][qq] = oldR[pp][qq] * exp(u) /
    ˜˜˜˜     ^˜
Update_v2.cpp:4354:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[pp][qq] = oldR[pp][qq] * exp(u) /
                   ˜˜˜˜ ^˜
Update_v2.cpp:4354:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[pp][qq] = oldR[pp][qq] * exp(u) /
                   ˜˜˜˜     ^˜
Update_v2.cpp:4355:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      (1 - oldR[pp][qq] + oldR[pp][qq] * exp(u));
           ˜˜˜˜ ^˜
Update_v2.cpp:4355:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      (1 - oldR[pp][qq] + oldR[pp][qq] * exp(u));
           ˜˜˜˜     ^˜
Update_v2.cpp:4355:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      (1 - oldR[pp][qq] + oldR[pp][qq] * exp(u));
                          ˜˜˜˜ ^˜
Update_v2.cpp:4355:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      (1 - oldR[pp][qq] + oldR[pp][qq] * exp(u));
                          ˜˜˜˜     ^˜
Update_v2.cpp:4356:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[qq][pp] = newR[pp][qq];
    ˜˜˜˜ ^˜
Update_v2.cpp:4356:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[qq][pp] = newR[pp][qq];
    ˜˜˜˜     ^˜
Update_v2.cpp:4356:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[qq][pp] = newR[pp][qq];
                   ˜˜˜˜ ^˜
Update_v2.cpp:4356:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    newR[qq][pp] = newR[pp][qq];
                   ˜˜˜˜     ^˜
Update_v2.cpp:4357:56: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
    double *newRVector = (double *) calloc(Q * (Q - 1) / 2,sizeof(double));
                                    ˜˜˜˜˜˜ ˜˜˜˜˜˜˜˜˜˜˜˜^˜˜
Update_v2.cpp:4361:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newRVector[kqq] = newR[p][q];
                          ˜˜˜˜ ^
Update_v2.cpp:4361:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newRVector[kqq] = newR[p][q];
                          ˜˜˜˜    ^
Update_v2.cpp:4375:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      double y = oldR[pp][qq];
                 ˜˜˜˜ ^˜
Update_v2.cpp:4375:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      double y = oldR[pp][qq];
                 ˜˜˜˜     ^˜
Update_v2.cpp:4395:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          isNeg += (newR[p][q] < 0.0);
                    ˜˜˜˜ ^
Update_v2.cpp:4395:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          isNeg += (newR[p][q] < 0.0);
                    ˜˜˜˜    ^
Update_v2.cpp:4403:42: warning: implicit conversion changes signedness: 'int' to 'size_t' (aka 'unsigned long') [-Wsign-conversion]
        double *newDDelta = (double *) calloc(Q * G,sizeof(double));
                                       ˜˜˜˜˜˜ ˜˜^˜˜
280 warnings generated.
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=native -g -O2 -Wall -pedantic -Wconversion -c Utility_v2.cpp -o Utility_v2.o
Utility_v2.cpp:100:16: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  Sigma.resize(Q);
  ˜˜˜˜˜        ^
Utility_v2.cpp:105:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Sigma[q].resize(Q);
    ˜˜˜˜˜ ^
Utility_v2.cpp:105:21: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Sigma[q].resize(Q);
    ˜˜˜˜˜           ^
Utility_v2.cpp:106:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Sigma[q][q] = gamma2 * tau2[q];
    ˜˜˜˜˜ ^
Utility_v2.cpp:106:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Sigma[q][q] = gamma2 * tau2[q];
    ˜˜˜˜˜    ^
Utility_v2.cpp:107:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Sigma[q][q] *= exp(a[q] * log(sigma2[kqg]));
    ˜˜˜˜˜ ^
Utility_v2.cpp:107:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Sigma[q][q] *= exp(a[q] * log(sigma2[kqg]));
    ˜˜˜˜˜    ^
Utility_v2.cpp:115:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[q1][q2] = r[k] * sqrt(Sigma[q1][q1] * Sigma[q2][q2]);
      ˜˜˜˜˜ ^˜
Utility_v2.cpp:115:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[q1][q2] = r[k] * sqrt(Sigma[q1][q1] * Sigma[q2][q2]);
      ˜˜˜˜˜     ^˜
Utility_v2.cpp:115:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[q1][q2] = r[k] * sqrt(Sigma[q1][q1] * Sigma[q2][q2]);
                                  ˜˜˜˜˜ ^˜
Utility_v2.cpp:115:45: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[q1][q2] = r[k] * sqrt(Sigma[q1][q1] * Sigma[q2][q2]);
                                  ˜˜˜˜˜     ^˜
Utility_v2.cpp:115:57: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[q1][q2] = r[k] * sqrt(Sigma[q1][q1] * Sigma[q2][q2]);
                                                  ˜˜˜˜˜ ^˜
Utility_v2.cpp:115:61: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[q1][q2] = r[k] * sqrt(Sigma[q1][q1] * Sigma[q2][q2]);
                                                  ˜˜˜˜˜     ^˜
Utility_v2.cpp:117:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[q2][q1] = Sigma[q1][q2];
      ˜˜˜˜˜ ^˜
Utility_v2.cpp:117:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[q2][q1] = Sigma[q1][q2];
      ˜˜˜˜˜     ^˜
Utility_v2.cpp:117:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[q2][q1] = Sigma[q1][q2];
                      ˜˜˜˜˜ ^˜
Utility_v2.cpp:117:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[q2][q1] = Sigma[q1][q2];
                      ˜˜˜˜˜     ^˜
Utility_v2.cpp:133:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    dim += on[q];
           ˜˜ ^
Utility_v2.cpp:135:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  Sigma.resize(dim);
  ˜˜˜˜˜        ^˜˜
Utility_v2.cpp:138:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    if (on[q] == 1) {
        ˜˜ ^
Utility_v2.cpp:140:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[k].resize(dim);
      ˜˜˜˜˜ ^
Utility_v2.cpp:140:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[k].resize(dim);
      ˜˜˜˜˜           ^˜˜
Utility_v2.cpp:141:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[k][k] = gamma2 * tau2[q];
      ˜˜˜˜˜ ^
Utility_v2.cpp:141:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[k][k] = gamma2 * tau2[q];
      ˜˜˜˜˜    ^
Utility_v2.cpp:142:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[k][k] *= exp(a[q] * log(sigma2[kqg]));
      ˜˜˜˜˜ ^
Utility_v2.cpp:142:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[k][k] *= exp(a[q] * log(sigma2[kqg]));
      ˜˜˜˜˜    ^
Utility_v2.cpp:150:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    if (on[q1] == 1) {
        ˜˜ ^˜
Utility_v2.cpp:153:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        if (on[q2] == 1) {
            ˜˜ ^˜
Utility_v2.cpp:156:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[k1][k2] = r[k] * sqrt(Sigma[k1][k1] * Sigma[k2][k2]);
            ˜˜˜˜˜ ^˜
Utility_v2.cpp:156:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[k1][k2] = r[k] * sqrt(Sigma[k1][k1] * Sigma[k2][k2]);
            ˜˜˜˜˜     ^˜
Utility_v2.cpp:156:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[k1][k2] = r[k] * sqrt(Sigma[k1][k1] * Sigma[k2][k2]);
                                        ˜˜˜˜˜ ^˜
Utility_v2.cpp:156:44: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[k1][k2] = r[k] * sqrt(Sigma[k1][k1] * Sigma[k2][k2]);
                                        ˜˜˜˜˜     ^˜
Utility_v2.cpp:156:56: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[k1][k2] = r[k] * sqrt(Sigma[k1][k1] * Sigma[k2][k2]);
                                                        ˜˜˜˜˜ ^˜
Utility_v2.cpp:156:60: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[k1][k2] = r[k] * sqrt(Sigma[k1][k1] * Sigma[k2][k2]);
                                                        ˜˜˜˜˜     ^˜
Utility_v2.cpp:157:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[k2][k1] = Sigma[k1][k2];
            ˜˜˜˜˜ ^˜
Utility_v2.cpp:157:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[k2][k1] = Sigma[k1][k2];
            ˜˜˜˜˜     ^˜
Utility_v2.cpp:157:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[k2][k1] = Sigma[k1][k2];
                            ˜˜˜˜˜ ^˜
Utility_v2.cpp:157:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            Sigma[k2][k1] = Sigma[k1][k2];
                            ˜˜˜˜˜     ^˜
Utility_v2.cpp:192:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    std::vector<double> Mean(Q,0.0);
                        ˜˜˜˜ ^
Utility_v2.cpp:198:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    std::vector<double> lin(Q,0.0);
                        ˜˜˜ ^
Utility_v2.cpp:199:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    std::vector<double> quad(Q,0.0);
                        ˜˜˜˜ ^
Utility_v2.cpp:209:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        quad[q] += 1.0 / variance;
        ˜˜˜˜ ^
Utility_v2.cpp:211:6: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        lin[q] += (x[ksqg] - delta[kqg] * (2.0 * psi[ksq] - 1.0) *
        ˜˜˜ ^
Utility_v2.cpp:224:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      varInv[q][q] += quad[q];
      ˜˜˜˜˜˜ ^
Utility_v2.cpp:224:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      varInv[q][q] += quad[q];
      ˜˜˜˜˜˜    ^
Utility_v2.cpp:224:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      varInv[q][q] += quad[q];
                      ˜˜˜˜ ^
Utility_v2.cpp:225:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Mean[q] += lin[q];
      ˜˜˜˜ ^
Utility_v2.cpp:225:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Mean[q] += lin[q];
                 ˜˜˜ ^
Utility_v2.cpp:229:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    std::vector<double> mean(Q,0.0);
                        ˜˜˜˜ ^
Utility_v2.cpp:236:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    std::vector<double> vv(Q,0.0);
                        ˜˜ ^
Utility_v2.cpp:243:5: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        vv[q] = nu[kqg];
        ˜˜ ^
Utility_v2.cpp:252:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nu[kqg] = vv[q];
                  ˜˜ ^
Utility_v2.cpp:221:12: warning: unused variable 'detPrior' [-Wunused-variable]
    double detPrior = inverse(var,varInv);
           ^
Utility_v2.cpp:228:12: warning: unused variable 'detPosterior' [-Wunused-variable]
    double detPosterior = 1.0 /inverse(varInv,var);
           ^
Utility_v2.cpp:279:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      on[q] = 1;
      ˜˜ ^
Utility_v2.cpp:292:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    std::vector<double> Mean(dim,0.0);
                        ˜˜˜˜ ^˜˜
Utility_v2.cpp:299:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    std::vector<double> mean(dim,0.0);
                        ˜˜˜˜ ^˜˜
Utility_v2.cpp:301:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    std::vector<double> lin(dim,0.0);
                        ˜˜˜ ^˜˜
Utility_v2.cpp:302:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    std::vector<double> quad(dim,0.0);
                        ˜˜˜˜ ^˜˜
Utility_v2.cpp:306:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      if (on[q] == 1) {
          ˜˜ ^
Utility_v2.cpp:315:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            quad[k] += 1.0 / variance;
            ˜˜˜˜ ^
Utility_v2.cpp:317:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            lin[k] += (2.0 * psi[ksq] - 1.0) * (x[xIndex] - nu[kqg]) / variance;
            ˜˜˜ ^
Utility_v2.cpp:331:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Mean[k] += lin[k];
      ˜˜˜˜ ^
Utility_v2.cpp:331:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Mean[k] += lin[k];
                 ˜˜˜ ^
Utility_v2.cpp:332:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      varInv[k][k] += quad[k];
      ˜˜˜˜˜˜ ^
Utility_v2.cpp:332:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      varInv[k][k] += quad[k];
      ˜˜˜˜˜˜    ^
Utility_v2.cpp:332:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      varInv[k][k] += quad[k];
                      ˜˜˜˜ ^
Utility_v2.cpp:341:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    std::vector<double> vv(dim,0.0);
                        ˜˜ ^˜˜
Utility_v2.cpp:347:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        if (on[q] == 1) {
            ˜˜ ^
Utility_v2.cpp:349:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vv[k] = Delta[kqg];
          ˜˜ ^
Utility_v2.cpp:360:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        if (on[q] == 1) {
            ˜˜ ^
Utility_v2.cpp:362:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          Delta[kqg] = vv[k];
                       ˜˜ ^
Utility_v2.cpp:303:9: warning: unused variable 's' [-Wunused-variable]
    int s;
        ^
Utility_v2.cpp:334:12: warning: unused variable 'detPosterior' [-Wunused-variable]
    double detPosterior = 1.0 / inverse(varInv,var);
           ^
Utility_v2.cpp:328:12: warning: unused variable 'detPrior' [-Wunused-variable]
    double detPrior = inverse(var,varInv);
           ^
Utility_v2.cpp:398:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double potLower = potOff[g] - potOn[g];
                    ˜˜˜˜˜˜ ^
Utility_v2.cpp:398:39: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double potLower = potOff[g] - potOn[g];
                                ˜˜˜˜˜ ^
Utility_v2.cpp:399:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double potUpper = potOff[g] - potOn[g];
                    ˜˜˜˜˜˜ ^
Utility_v2.cpp:399:39: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double potUpper = potOff[g] - potOn[g];
                                ˜˜˜˜˜ ^
Utility_v2.cpp:403:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  int n = neighbour[g].size();
          ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:413:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  for (gg = 0; gg < neighbour[g].size(); gg++) {
                    ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:414:38: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    meanLower += (double) valueLower[neighbour[g][gg]];
                          ˜˜˜˜˜˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:414:48: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    meanLower += (double) valueLower[neighbour[g][gg]];
                                     ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:414:51: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    meanLower += (double) valueLower[neighbour[g][gg]];
                                     ˜˜˜˜˜˜˜˜˜    ^˜
Utility_v2.cpp:415:38: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    meanUpper += (double) valueUpper[neighbour[g][gg]];
                          ˜˜˜˜˜˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:415:48: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    meanUpper += (double) valueUpper[neighbour[g][gg]];
                                     ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:415:51: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    meanUpper += (double) valueUpper[neighbour[g][gg]];
                                     ˜˜˜˜˜˜˜˜˜    ^˜
Utility_v2.cpp:418:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  if (neighbour[g].size() > 0) {
      ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:419:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    meanLower /= (double) neighbour[g].size();
                          ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:420:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    meanUpper /= (double) neighbour[g].size();
                          ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:435:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  for (gg = 0; gg < neighbour[g].size(); gg++) {
                    ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:436:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    int gene = neighbour[g][gg];
               ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:436:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    int gene = neighbour[g][gg];
               ˜˜˜˜˜˜˜˜˜    ^˜
Utility_v2.cpp:437:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    int n = neighbour[gene].size();
            ˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:447:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (ggg = 0; ggg < neighbour[gene].size(); ggg++) {
                        ˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:448:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      if (neighbour[gene][ggg] != g) {
          ˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:448:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      if (neighbour[gene][ggg] != g) {
          ˜˜˜˜˜˜˜˜˜       ^˜˜
Utility_v2.cpp:449:35: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        meanLower += (double) valueLower[neighbour[gene][ggg]];
                              ˜˜˜˜˜˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:449:45: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        meanLower += (double) valueLower[neighbour[gene][ggg]];
                                         ˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:449:51: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        meanLower += (double) valueLower[neighbour[gene][ggg]];
                                         ˜˜˜˜˜˜˜˜˜       ^˜˜
Utility_v2.cpp:450:35: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        meanUpper += (double) valueUpper[neighbour[gene][ggg]];
                              ˜˜˜˜˜˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:450:45: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        meanUpper += (double) valueUpper[neighbour[gene][ggg]];
                                         ˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:450:51: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        meanUpper += (double) valueUpper[neighbour[gene][ggg]];
                                         ˜˜˜˜˜˜˜˜˜       ^˜˜
Utility_v2.cpp:454:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    meanLower /= (double) neighbour[gene].size();
                          ˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:455:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    meanUpper /= (double) neighbour[gene].size();
                          ˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:460:48: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    double extra = omega / ((double) neighbour[gene].size());
                                     ˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:462:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    if (valueLower[gene] == 0 && valueUpper[gene] == 0) {
        ˜˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:462:45: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    if (valueLower[gene] == 0 && valueUpper[gene] == 0) {
                                 ˜˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:466:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    else if (valueLower[gene] == 1 && valueUpper[gene] == 1) {
             ˜˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:466:50: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    else if (valueLower[gene] == 1 && valueUpper[gene] == 1) {
                                      ˜˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:503:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    valueLower[g] = 1;
    ˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:505:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    valueLower[g] = 0;
    ˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:508:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    valueUpper[g] = 1;
    ˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:510:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    valueUpper[g] = 0;
    ˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:403:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int n = neighbour[g].size();
      ˜   ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:437:13: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
    int n = neighbour[gene].size();
        ˜   ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:538:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        int first = start[b];
                    ˜˜˜˜˜ ^
Utility_v2.cpp:541:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          last = start[b-1];
                 ˜˜˜˜˜ ˜^˜
Utility_v2.cpp:545:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Random ran(seeds[b]);
                   ˜˜˜˜˜ ^
Utility_v2.cpp:562:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nUndef += (valueLower[g] != valueUpper[g]);
                   ˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:562:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nUndef += (valueLower[g] != valueUpper[g]);
                                    ˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:577:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          delta[g] = valueLower[g];
                     ˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:588:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      pot += potOn[g];
             ˜˜˜˜˜ ^
Utility_v2.cpp:590:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      pot += potOff[g];
             ˜˜˜˜˜˜ ^
Utility_v2.cpp:592:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    int n = neighbour[g].size();
            ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:600:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (gg = 0; gg < neighbour[g].size(); gg++)
                      ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:601:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nOn += delta[neighbour[g][gg]];
                   ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:601:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nOn += delta[neighbour[g][gg]];
                   ˜˜˜˜˜˜˜˜˜    ^˜
Utility_v2.cpp:602:60: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    double fraction = ((double) nOn) / ((double) neighbour[g].size());
                                                 ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:537:29: warning: implicit conversion loses integer precision: 'unsigned long' to 'int' [-Wshorten-64-to-32]
      for (b = start.size() - 1; b >= 0; b--) {
             ˜ ˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜
Utility_v2.cpp:592:13: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
    int n = neighbour[g].size();
        ˜   ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:628:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double potLower = potOff[g] - potOn[g];
                    ˜˜˜˜˜˜ ^
Utility_v2.cpp:628:39: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double potLower = potOff[g] - potOn[g];
                                ˜˜˜˜˜ ^
Utility_v2.cpp:629:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double potUpper = potOff[g] - potOn[g];
                    ˜˜˜˜˜˜ ^
Utility_v2.cpp:629:39: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double potUpper = potOff[g] - potOn[g];
                                ˜˜˜˜˜ ^
Utility_v2.cpp:635:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  for (k = 0; k < neighbour[g].size(); k++) {
                  ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:636:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    int gg = neighbour[g][k];
             ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:636:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    int gg = neighbour[g][k];
             ˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:637:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    int ng = neighbour[g].size();
             ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:638:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    int ngg = neighbour[gg].size();
              ˜˜˜˜˜˜˜˜˜ ^˜
Utility_v2.cpp:642:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    if (valueLower[gg] == 0 && valueUpper[gg] == 0) {
        ˜˜˜˜˜˜˜˜˜˜ ^˜
Utility_v2.cpp:642:43: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    if (valueLower[gg] == 0 && valueUpper[gg] == 0) {
                               ˜˜˜˜˜˜˜˜˜˜ ^˜
Utility_v2.cpp:646:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    else if (valueLower[gg] == 1 && valueUpper[gg] == 1) {
             ˜˜˜˜˜˜˜˜˜˜ ^˜
Utility_v2.cpp:646:48: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    else if (valueLower[gg] == 1 && valueUpper[gg] == 1) {
                                    ˜˜˜˜˜˜˜˜˜˜ ^˜
Utility_v2.cpp:671:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    valueLower[g] = 1;
    ˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:673:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    valueLower[g] = 0;
    ˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:676:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    valueUpper[g] = 1;
    ˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:678:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    valueUpper[g] = 0;
    ˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:637:14: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
    int ng = neighbour[g].size();
        ˜˜   ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:638:15: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
    int ngg = neighbour[gg].size();
        ˜˜˜   ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:706:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        int first = start[b];
                    ˜˜˜˜˜ ^
Utility_v2.cpp:709:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          last = start[b-1];
                 ˜˜˜˜˜ ˜^˜
Utility_v2.cpp:713:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Random ran(seeds[b]);
                   ˜˜˜˜˜ ^
Utility_v2.cpp:729:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nUndef += (valueLower[g] != valueUpper[g]);
                   ˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:729:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nUndef += (valueLower[g] != valueUpper[g]);
                                    ˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:744:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          delta[g] = valueLower[g];
                     ˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:755:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      pot += - alpha + potOn[g];
                       ˜˜˜˜˜ ^
Utility_v2.cpp:757:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      pot += potOff[g];
             ˜˜˜˜˜˜ ^
Utility_v2.cpp:760:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (k = 0; k < neighbour[g].size(); k++) {
                    ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:761:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      int gg = neighbour[g][k];
               ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:761:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      int gg = neighbour[g][k];
               ˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:763:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        int ng = neighbour[g].size();
                 ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:764:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        int ngg = neighbour[gg].size();
                  ˜˜˜˜˜˜˜˜˜ ^˜
Utility_v2.cpp:764:6: warning: unused variable 'ngg' [-Wunused-variable]
        int ngg = neighbour[gg].size();
            ^
Utility_v2.cpp:705:29: warning: implicit conversion loses integer precision: 'unsigned long' to 'int' [-Wshorten-64-to-32]
      for (b = start.size() - 1; b >= 0; b--) {
             ˜ ˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜
Utility_v2.cpp:763:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
        int ng = neighbour[g].size();
            ˜˜   ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:764:12: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
        int ngg = neighbour[gg].size();
            ˜˜˜   ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:786:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double potLower = potOff[kqg] - potOn[kqg];
                    ˜˜˜˜˜˜ ^˜˜
Utility_v2.cpp:786:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double potLower = potOff[kqg] - potOn[kqg];
                                  ˜˜˜˜˜ ^˜˜
Utility_v2.cpp:787:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double potUpper = potOff[kqg] - potOn[kqg];
                    ˜˜˜˜˜˜ ^˜˜
Utility_v2.cpp:787:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double potUpper = potOff[kqg] - potOn[kqg];
                                  ˜˜˜˜˜ ^˜˜
Utility_v2.cpp:793:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  for (k = 0; k < neighbour[g].size(); k++) {
                  ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:794:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    int gg = neighbour[g][k];
             ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:794:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    int gg = neighbour[g][k];
             ˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:795:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    int ng = neighbour[g].size();
             ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:796:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    int ngg = neighbour[gg].size();
              ˜˜˜˜˜˜˜˜˜ ^˜
Utility_v2.cpp:802:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    if (valueLower[kqgg] == 0 && valueUpper[kqgg] == 0) {
        ˜˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:802:45: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    if (valueLower[kqgg] == 0 && valueUpper[kqgg] == 0) {
                                 ˜˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:806:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    else if (valueLower[kqgg] == 1 && valueUpper[kqgg] == 1) {
             ˜˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:806:50: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    else if (valueLower[kqgg] == 1 && valueUpper[kqgg] == 1) {
                                      ˜˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:821:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      if (valueLower[kqqg] == 0 && valueUpper[kqqg] == 0) {
          ˜˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:821:47: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      if (valueLower[kqqg] == 0 && valueUpper[kqqg] == 0) {
                                   ˜˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:825:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      else if (valueLower[kqqg] == 1 && valueUpper[kqqg] == 1) {
               ˜˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:825:52: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      else if (valueLower[kqqg] == 1 && valueUpper[kqqg] == 1) {
                                        ˜˜˜˜˜˜˜˜˜˜ ^˜˜˜
Utility_v2.cpp:851:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    valueLower[kqg] = 1;
    ˜˜˜˜˜˜˜˜˜˜ ^˜˜
Utility_v2.cpp:853:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    valueLower[kqg] = 0;
    ˜˜˜˜˜˜˜˜˜˜ ^˜˜
Utility_v2.cpp:856:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    valueUpper[kqg] = 1;
    ˜˜˜˜˜˜˜˜˜˜ ^˜˜
Utility_v2.cpp:858:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    valueUpper[kqg] = 0;
    ˜˜˜˜˜˜˜˜˜˜ ^˜˜
Utility_v2.cpp:795:14: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
    int ng = neighbour[g].size();
        ˜˜   ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:796:15: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
    int ngg = neighbour[gg].size();
        ˜˜˜   ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:886:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        int first = start[b];
                    ˜˜˜˜˜ ^
Utility_v2.cpp:889:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          last = start[b-1];
                 ˜˜˜˜˜ ˜^˜
Utility_v2.cpp:893:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Random ran(seeds[b]);
                   ˜˜˜˜˜ ^
Utility_v2.cpp:912:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          nUndef += (valueLower[kqg] != valueUpper[kqg]);
                     ˜˜˜˜˜˜˜˜˜˜ ^˜˜
Utility_v2.cpp:912:45: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          nUndef += (valueLower[kqg] != valueUpper[kqg]);
                                        ˜˜˜˜˜˜˜˜˜˜ ^˜˜
Utility_v2.cpp:930:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            delta[kqg] = valueLower[kqg];
                         ˜˜˜˜˜˜˜˜˜˜ ^˜˜
Utility_v2.cpp:944:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        pot += - alpha + potOn[kqg];
                         ˜˜˜˜˜ ^˜˜
Utility_v2.cpp:946:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        pot += potOff[kqg];
               ˜˜˜˜˜˜ ^˜˜
Utility_v2.cpp:949:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (k = 0; k < neighbour[g].size(); k++) {
                      ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:950:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        int gg = neighbour[g][k];
                 ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:950:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        int gg = neighbour[g][k];
                 ˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:953:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          int ng = neighbour[g].size();
                   ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:954:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          int ngg = neighbour[gg].size();
                    ˜˜˜˜˜˜˜˜˜ ^˜
Utility_v2.cpp:954:8: warning: unused variable 'ngg' [-Wunused-variable]
          int ngg = neighbour[gg].size();
              ^
Utility_v2.cpp:885:29: warning: implicit conversion loses integer precision: 'unsigned long' to 'int' [-Wshorten-64-to-32]
      for (b = start.size() - 1; b >= 0; b--) {
             ˜ ˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜
Utility_v2.cpp:953:13: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
          int ng = neighbour[g].size();
              ˜˜   ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:954:14: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
          int ngg = neighbour[gg].size();
              ˜˜˜   ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:991:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  R.resize(Q);
  ˜        ^
Utility_v2.cpp:994:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[p].resize(Q);
    ˜ ^
Utility_v2.cpp:994:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[p].resize(Q);
    ˜           ^
Utility_v2.cpp:997:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[p][p] = tau2R[p];
    ˜ ^
Utility_v2.cpp:997:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[p][p] = tau2R[p];
    ˜    ^
Utility_v2.cpp:999:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][q] = sqrt(tau2R[p] * tau2R[q]) * r[qq2index(p,q,Q)];
      ˜ ^
Utility_v2.cpp:999:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][q] = sqrt(tau2R[p] * tau2R[q]) * r[qq2index(p,q,Q)];
      ˜    ^
Utility_v2.cpp:1000:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[q][p] = R[p][q];
      ˜ ^
Utility_v2.cpp:1000:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[q][p] = R[p][q];
      ˜    ^
Utility_v2.cpp:1000:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[q][p] = R[p][q];
                ˜ ^
Utility_v2.cpp:1000:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[q][p] = R[p][q];
                ˜    ^
Utility_v2.cpp:1016:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  DeltaStar[0].resize(cliqueSize);
  ˜˜˜˜˜˜˜˜˜           ^˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:1019:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    DeltaStar[0][g].resize(Q);
    ˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:1019:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    DeltaStar[0][g].resize(Q);
    ˜˜˜˜˜˜˜˜˜              ^
Utility_v2.cpp:1021:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DeltaStar[0][g][q] = Delta[qg2index(q,g,Q,G)] / exp(0.5 * b[q] * log(sigma2[qg2index(q,g,Q,G)]));
      ˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:1021:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DeltaStar[0][g][q] = Delta[qg2index(q,g,Q,G)] / exp(0.5 * b[q] * log(sigma2[qg2index(q,g,Q,G)]));
      ˜˜˜˜˜˜˜˜˜       ^
Utility_v2.cpp:1028:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (g2 = 0; g2 < DNew[0][g1].size(); g2++)
                      ˜˜˜˜    ^˜
Utility_v2.cpp:1029:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DNew[0][g1][g2] += temp[g1][g2];
      ˜˜˜˜    ^˜
Utility_v2.cpp:1029:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DNew[0][g1][g2] += temp[g1][g2];
      ˜˜˜˜        ^˜
Utility_v2.cpp:1029:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DNew[0][g1][g2] += temp[g1][g2];
                         ˜˜˜˜ ^˜
Utility_v2.cpp:1029:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DNew[0][g1][g2] += temp[g1][g2];
                         ˜˜˜˜     ^˜
Utility_v2.cpp:1037:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    int cliqueSize = DNew[k].size();
                     ˜˜˜˜ ^
Utility_v2.cpp:1038:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    DeltaStar[k].resize(cliqueSize);
    ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1038:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    DeltaStar[k].resize(cliqueSize);
    ˜˜˜˜˜˜˜˜˜           ^˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:1041:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (g = 0; g < oldComponents[k].size(); g++) {
                    ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1042:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DeltaStar[k][g].resize(Q);
      ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1042:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DeltaStar[k][g].resize(Q);
      ˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:1042:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DeltaStar[k][g].resize(Q);
      ˜˜˜˜˜˜˜˜˜              ^
Utility_v2.cpp:1044:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DeltaStar[k][g][q] = DeltaStar[oldClique[k]][oldComponents[k][g]][q];
        ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1044:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DeltaStar[k][g][q] = DeltaStar[oldClique[k]][oldComponents[k][g]][q];
        ˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:1044:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DeltaStar[k][g][q] = DeltaStar[oldClique[k]][oldComponents[k][g]][q];
        ˜˜˜˜˜˜˜˜˜       ^
Utility_v2.cpp:1044:33: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DeltaStar[k][g][q] = DeltaStar[oldClique[k]][oldComponents[k][g]][q];
                             ˜˜˜˜˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:1044:43: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DeltaStar[k][g][q] = DeltaStar[oldClique[k]][oldComponents[k][g]][q];
                                       ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1044:47: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DeltaStar[k][g][q] = DeltaStar[oldClique[k]][oldComponents[k][g]][q];
                             ˜˜˜˜˜˜˜˜˜               ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:1044:61: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DeltaStar[k][g][q] = DeltaStar[oldClique[k]][oldComponents[k][g]][q];
                                                     ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1044:64: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DeltaStar[k][g][q] = DeltaStar[oldClique[k]][oldComponents[k][g]][q];
                                                     ˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:1044:68: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DeltaStar[k][g][q] = DeltaStar[oldClique[k]][oldComponents[k][g]][q];
                             ˜˜˜˜˜˜˜˜˜                                    ^
Utility_v2.cpp:1047:21: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
    for (g = 0; g < cliqueSize - oldComponents[k].size(); g++) {
                    ^˜˜˜˜˜˜˜˜˜ ˜
Utility_v2.cpp:1047:48: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (g = 0; g < cliqueSize - oldComponents[k].size(); g++) {
                                 ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1048:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DeltaStar[k][g + oldComponents[k].size()].resize(Q);
      ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1048:20: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
      DeltaStar[k][g + oldComponents[k].size()].resize(Q);
                   ^ ˜
Utility_v2.cpp:1048:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DeltaStar[k][g + oldComponents[k].size()].resize(Q);
                       ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1048:56: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DeltaStar[k][g + oldComponents[k].size()].resize(Q);
      ˜˜˜˜˜˜˜˜˜                                        ^
Utility_v2.cpp:1049:16: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
      int gg = g + oldComponents[k].size();
               ^ ˜
Utility_v2.cpp:1049:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      int gg = g + oldComponents[k].size();
                   ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1052:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DeltaStar[k][gg][q] = Delta[kqg] / exp(0.5 * b[q] * log(sigma2[kqg]));
        ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1052:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DeltaStar[k][gg][q] = Delta[kqg] / exp(0.5 * b[q] * log(sigma2[kqg]));
        ˜˜˜˜˜˜˜˜˜    ^˜
Utility_v2.cpp:1052:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DeltaStar[k][gg][q] = Delta[kqg] / exp(0.5 * b[q] * log(sigma2[kqg]));
        ˜˜˜˜˜˜˜˜˜        ^
Utility_v2.cpp:1057:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    quadratic2(DeltaStar[k],RInverse,temp);
               ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1059:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (g1 = 0; g1 < DNew[k].size(); g1++)
                      ˜˜˜˜ ^
Utility_v2.cpp:1060:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (g2 = 0; g2 < DNew[k][g1].size(); g2++)
                        ˜˜˜˜ ^
Utility_v2.cpp:1060:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (g2 = 0; g2 < DNew[k][g1].size(); g2++)
                        ˜˜˜˜    ^˜
Utility_v2.cpp:1061:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DNew[k][g1][g2] += temp[g1][g2];
        ˜˜˜˜ ^
Utility_v2.cpp:1061:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DNew[k][g1][g2] += temp[g1][g2];
        ˜˜˜˜    ^˜
Utility_v2.cpp:1061:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DNew[k][g1][g2] += temp[g1][g2];
        ˜˜˜˜        ^˜
Utility_v2.cpp:1061:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DNew[k][g1][g2] += temp[g1][g2];
                           ˜˜˜˜ ^˜
Utility_v2.cpp:1061:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DNew[k][g1][g2] += temp[g1][g2];
                           ˜˜˜˜     ^˜
Utility_v2.cpp:1063:14: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
    first += cliqueSize - oldComponents[k].size();
             ^˜˜˜˜˜˜˜˜˜ ˜
Utility_v2.cpp:1063:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    first += cliqueSize - oldComponents[k].size();
                          ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1015:20: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int cliqueSize = DNew[0].size();
      ˜˜˜˜˜˜˜˜˜˜   ^˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:1037:22: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
    int cliqueSize = DNew[k].size();
        ˜˜˜˜˜˜˜˜˜˜   ^˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:1049:18: warning: implicit conversion loses integer precision: 'unsigned long' to 'int' [-Wshorten-64-to-32]
      int gg = g + oldComponents[k].size();
          ˜˜   ˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:1097:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    OmegaDet[k] = inverse(Omega[k],OmegaInv[k]);
    ˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1097:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    OmegaDet[k] = inverse(Omega[k],OmegaInv[k]);
                          ˜˜˜˜˜ ^
Utility_v2.cpp:1097:45: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    OmegaDet[k] = inverse(Omega[k],OmegaInv[k]);
                                   ˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1102:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    OmegaSep[k].resize(oldComponents[k].size());
    ˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1102:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    OmegaSep[k].resize(oldComponents[k].size());
                       ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1104:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (i = 0; i < oldComponents[k].size(); i++) {
                    ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1105:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      OmegaSep[k][i].resize(oldComponents[k].size());
      ˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1105:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      OmegaSep[k][i].resize(oldComponents[k].size());
      ˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:1105:43: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      OmegaSep[k][i].resize(oldComponents[k].size());
                            ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1107:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (j = 0; j < oldComponents[k].size(); j++) {
                      ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1108:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaSep[k][i][j] = Omega[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
        ˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1108:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaSep[k][i][j] = Omega[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
        ˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:1108:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaSep[k][i][j] = Omega[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
        ˜˜˜˜˜˜˜˜       ^
Utility_v2.cpp:1108:28: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaSep[k][i][j] = Omega[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                            ˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:1108:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaSep[k][i][j] = Omega[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                                  ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1108:42: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaSep[k][i][j] = Omega[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                            ˜˜˜˜˜               ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:1108:56: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaSep[k][i][j] = Omega[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                                                ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1108:59: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaSep[k][i][j] = Omega[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                                                ˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:1108:63: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaSep[k][i][j] = Omega[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                            ˜˜˜˜˜                                    ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:1108:77: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaSep[k][i][j] = Omega[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                                                                     ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1108:80: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaSep[k][i][j] = Omega[oldClique[k]][oldComponents[k][i]][oldComponents[k][j]];
                                                                     ˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:1116:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    if (OmegaSep[k].size() > 0)
        ˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1117:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      OmegaSepDet[k] = inverse(OmegaSep[k],OmegaSepInv[k]);
      ˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1117:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      OmegaSepDet[k] = inverse(OmegaSep[k],OmegaSepInv[k]);
                               ˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1117:56: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      OmegaSepDet[k] = inverse(OmegaSep[k],OmegaSepInv[k]);
                                           ˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1121:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  OmegaInvSparse.resize(G);
  ˜˜˜˜˜˜˜˜˜˜˜˜˜˜        ^
Utility_v2.cpp:1124:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    OmegaInvSparse[g].clear();
    ˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1131:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    nr[k].resize(Omega[k].size());
    ˜˜ ^
Utility_v2.cpp:1131:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    nr[k].resize(Omega[k].size());
                 ˜˜˜˜˜ ^
Utility_v2.cpp:1133:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (gg = 0; gg < oldComponents[k].size(); gg++)
                      ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1134:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nr[k][gg] = nr[oldClique[k]][oldComponents[k][gg]];
      ˜˜ ^
Utility_v2.cpp:1134:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nr[k][gg] = nr[oldClique[k]][oldComponents[k][gg]];
      ˜˜    ^˜
Utility_v2.cpp:1134:22: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nr[k][gg] = nr[oldClique[k]][oldComponents[k][gg]];
                  ˜˜ ^˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:1134:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nr[k][gg] = nr[oldClique[k]][oldComponents[k][gg]];
                     ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1134:36: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nr[k][gg] = nr[oldClique[k]][oldComponents[k][gg]];
                  ˜˜               ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:1134:50: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nr[k][gg] = nr[oldClique[k]][oldComponents[k][gg]];
                                   ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1134:53: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nr[k][gg] = nr[oldClique[k]][oldComponents[k][gg]];
                                   ˜˜˜˜˜˜˜˜˜˜˜˜˜    ^˜
Utility_v2.cpp:1135:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (gg = oldComponents[k].size(); gg < Omega[k].size(); gg++) {
              ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1135:51: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (gg = oldComponents[k].size(); gg < Omega[k].size(); gg++) {
                                            ˜˜˜˜˜ ^
Utility_v2.cpp:1136:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nr[k][gg] = g;
      ˜˜ ^
Utility_v2.cpp:1136:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      nr[k][gg] = g;
      ˜˜    ^˜
Utility_v2.cpp:1240:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (r = 0; r < nr[k].size(); r++) {
                    ˜˜ ^
Utility_v2.cpp:1242:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (s = 0; s < nr[k].size(); s++) {
                      ˜˜ ^
Utility_v2.cpp:1243:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        int g = nr[k][r];
                ˜˜ ^
Utility_v2.cpp:1243:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        int g = nr[k][r];
                ˜˜    ^
Utility_v2.cpp:1244:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        int gg = nr[k][s];
                 ˜˜ ^
Utility_v2.cpp:1244:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        int gg = nr[k][s];
                 ˜˜    ^
Utility_v2.cpp:1245:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        double value = OmegaInv[k][r][s];
                       ˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1245:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        double value = OmegaInv[k][r][s];
                       ˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:1245:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        double value = OmegaInv[k][r][s];
                       ˜˜˜˜˜˜˜˜       ^
Utility_v2.cpp:1248:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        it = OmegaInvSparse[g].find(gg);
             ˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1249:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        if (it == OmegaInvSparse[g].end())
                  ˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1250:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaInvSparse[g].insert(pair<int,double>(gg,value));
          ˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1252:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          OmegaInvSparse[g][gg] += value;
          ˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1260:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (r = 0; r < oldComponents[k].size(); r++) {
                    ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1262:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (s = 0; s < oldComponents[k].size(); s++) {
                      ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1263:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        int g = nr[k][r];
                ˜˜ ^
Utility_v2.cpp:1263:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        int g = nr[k][r];
                ˜˜    ^
Utility_v2.cpp:1264:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        int gg = nr[k][s];
                 ˜˜ ^
Utility_v2.cpp:1264:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        int gg = nr[k][s];
                 ˜˜    ^
Utility_v2.cpp:1265:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        double value = OmegaSepInv[k][r][s];
                       ˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1265:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        double value = OmegaSepInv[k][r][s];
                       ˜˜˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:1265:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        double value = OmegaSepInv[k][r][s];
                       ˜˜˜˜˜˜˜˜˜˜˜       ^
Utility_v2.cpp:1267:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaInvSparse[g][gg] -= value;
        ˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1297:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  R.resize(Q);
  ˜        ^
Utility_v2.cpp:1300:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[p].resize(Q);
    ˜ ^
Utility_v2.cpp:1300:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[p].resize(Q);
    ˜           ^
Utility_v2.cpp:1304:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[p][p] = tau2R[p];
    ˜ ^
Utility_v2.cpp:1304:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[p][p] = tau2R[p];
    ˜    ^
Utility_v2.cpp:1306:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][q] = sqrt(tau2R[p] * tau2R[q]) * r[qq2index(p,q,Q)];
      ˜ ^
Utility_v2.cpp:1306:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][q] = sqrt(tau2R[p] * tau2R[q]) * r[qq2index(p,q,Q)];
      ˜    ^
Utility_v2.cpp:1307:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[q][p] = R[p][q];
      ˜ ^
Utility_v2.cpp:1307:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[q][p] = R[p][q];
      ˜    ^
Utility_v2.cpp:1307:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[q][p] = R[p][q];
                ˜ ^
Utility_v2.cpp:1307:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[q][p] = R[p][q];
                ˜    ^
Utility_v2.cpp:1337:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  VinvSparse.resize(G*Q);
  ˜˜˜˜˜˜˜˜˜˜        ˜^˜
Utility_v2.cpp:1339:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    VinvSparse[k].clear();
    ˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1343:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (it = OmegaInvSparse[g].begin(); it != OmegaInvSparse[g].end(); it++) {
              ˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1343:63: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (it = OmegaInvSparse[g].begin(); it != OmegaInvSparse[g].end(); it++) {
                                               ˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1352:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double cov = value * RInverse[q][qq];
                               ˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1352:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double cov = value * RInverse[q][qq];
                               ˜˜˜˜˜˜˜˜    ^˜
Utility_v2.cpp:1354:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          VinvSparse[index].insert(pair<int,double>(indexindex,cov));
          ˜˜˜˜˜˜˜˜˜˜ ^˜˜˜˜
Utility_v2.cpp:1402:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        L[index] = diag;
        ˜ ^˜˜˜˜
Utility_v2.cpp:1403:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        l[index] = ll;
        ˜ ^˜˜˜˜
Utility_v2.cpp:1410:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    VinvSparse[index][index] += L[index];
    ˜˜˜˜˜˜˜˜˜˜ ^˜˜˜˜
Utility_v2.cpp:1410:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    VinvSparse[index][index] += L[index];
                                ˜ ^˜˜˜˜
Utility_v2.cpp:1459:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    VinvSparseReversed[k].clear();
    ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1462:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (it = VinvSparse[k].begin(); it != VinvSparse[k].end(); it++) {
              ˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1462:55: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (it = VinvSparse[k].begin(); it != VinvSparse[k].end(); it++) {
                                           ˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1463:54: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      map<int,double>::iterator itextra = VinvSparse[k].end();
                                          ˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1468:44: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
      int kk = VinvSparseReversed.size() - k - 1;
                                         ˜ ^
Utility_v2.cpp:1469:44: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
      int rr = VinvSparseReversed.size() - r - 1;
                                         ˜ ^
Utility_v2.cpp:1470:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      VinvSparseReversed[rr].insert(pair<int,double>(kk,value));
      ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^˜
Utility_v2.cpp:1463:33: warning: unused variable 'itextra' [-Wunused-variable]
      map<int,double>::iterator itextra = VinvSparse[k].end();
                                ^
Utility_v2.cpp:1500:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  cholReversed.resize(Q * G);
  ˜˜˜˜˜˜˜˜˜˜˜˜        ˜˜^˜˜
Utility_v2.cpp:1502:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    cholReversed[index].clear();
    ˜˜˜˜˜˜˜˜˜˜˜˜ ^˜˜˜˜
Utility_v2.cpp:1508:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (it = VinvSparseReversed[i].find(i); it != VinvSparseReversed[i].end(); it++) {
              ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1508:71: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (it = VinvSparseReversed[i].find(i); it != VinvSparseReversed[i].end(); it++) {
                                                   ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1514:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (it2 = cholReversed[i].begin(); it2 != cholReversed[i].end(); it2++) {
                 ˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1514:63: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (it2 = cholReversed[i].begin(); it2 != cholReversed[i].end(); it2++) {
                                                 ˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1518:49: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          map<int,double>::iterator it3 = cholReversed[j].find(k);
                                          ˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1519:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          if (it3 != cholReversed[j].end()) {
                     ˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1532:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        cholReversed[j].insert(pair<int,double>(i,sqrt(sum)));
        ˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1534:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        cholReversed[j].insert(pair<int,double>(i,sum / cholReversed[i][i]));
        ˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1534:63: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        cholReversed[j].insert(pair<int,double>(i,sum / cholReversed[i][i]));
                                                        ˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1564:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    chol[k].clear();
    ˜˜˜˜ ^
Utility_v2.cpp:1567:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (it = cholReversed[k].begin(); it != cholReversed[k].end(); it++) {
              ˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1567:59: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (it = cholReversed[k].begin(); it != cholReversed[k].end(); it++) {
                                             ˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1571:30: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
      int kk = chol.size() - k - 1;
                           ˜ ^
Utility_v2.cpp:1572:30: warning: implicit conversion changes signedness: 'int' to 'unsigned long' [-Wsign-conversion]
      int rr = chol.size() - r - 1;
                           ˜ ^
Utility_v2.cpp:1573:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      chol[rr].insert(pair<int,double>(kk,value));
      ˜˜˜˜ ^˜
Utility_v2.cpp:1601:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    cholT[k].clear();
    ˜˜˜˜˜ ^
Utility_v2.cpp:1604:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (it = chol[i].begin(); it != chol[i].end(); it++) {
              ˜˜˜˜ ^
Utility_v2.cpp:1604:43: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (it = chol[i].begin(); it != chol[i].end(); it++) {
                                     ˜˜˜˜ ^
Utility_v2.cpp:1608:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      cholT[j].insert(pair<int,double>(i,value));
      ˜˜˜˜˜ ^
Utility_v2.cpp:1640:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (it = cholT[i].begin(); it != cholT[i].end(); it++) {
              ˜˜˜˜˜ ^
Utility_v2.cpp:1640:45: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (it = cholT[i].begin(); it != cholT[i].end(); it++) {
                                      ˜˜˜˜˜ ^
Utility_v2.cpp:1647:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        sum += value * u[j];
                       ˜ ^
Utility_v2.cpp:1649:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    u[i] = (l[i] - sum) / diag;
    ˜ ^
Utility_v2.cpp:1649:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    u[i] = (l[i] - sum) / diag;
            ˜ ^
Utility_v2.cpp:1657:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (it = chol[i].begin(); it != chol[i].end(); it++) {
              ˜˜˜˜ ^
Utility_v2.cpp:1657:43: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (it = chol[i].begin(); it != chol[i].end(); it++) {
                                     ˜˜˜˜ ^
Utility_v2.cpp:1664:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        sum += value * mean[j];
                       ˜˜˜˜ ^
Utility_v2.cpp:1666:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    mean[i] = (u[i] - sum) / diag;
    ˜˜˜˜ ^
Utility_v2.cpp:1666:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    mean[i] = (u[i] - sum) / diag;
               ˜ ^
Utility_v2.cpp:1694:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      z[k] = ran.Norm01();
      ˜ ^
Utility_v2.cpp:1717:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (it = chol[i].begin(); it != chol[i].end(); it++) {
                ˜˜˜˜ ^
Utility_v2.cpp:1717:45: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (it = chol[i].begin(); it != chol[i].end(); it++) {
                                       ˜˜˜˜ ^
Utility_v2.cpp:1724:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          sum += value * sample[j];
                         ˜˜˜˜˜˜ ^
Utility_v2.cpp:1726:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      sample[i] = (z[i] - sum) / diag;
      ˜˜˜˜˜˜ ^
Utility_v2.cpp:1726:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      sample[i] = (z[i] - sum) / diag;
                   ˜ ^
Utility_v2.cpp:1749:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    DeltaStar.resize(G);
    ˜˜˜˜˜˜˜˜˜        ^
Utility_v2.cpp:1751:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DeltaStar[g].resize(Q);
      ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1751:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      DeltaStar[g].resize(Q);
      ˜˜˜˜˜˜˜˜˜           ^
Utility_v2.cpp:1753:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DeltaStar[g][q] = Delta[qg2index(q,g,Q,G)] / exp(0.5 * b[q] * log(sigma2[qg2index(q,g,Q,G)]));
        ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1753:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DeltaStar[g][q] = Delta[qg2index(q,g,Q,G)] / exp(0.5 * b[q] * log(sigma2[qg2index(q,g,Q,G)]));
        ˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:1763:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DeltaStar[g][q] -= mean[index];
        ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1763:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DeltaStar[g][q] -= mean[index];
        ˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:1763:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        DeltaStar[g][q] -= mean[index];
                           ˜˜˜˜ ^˜˜˜˜
Utility_v2.cpp:1772:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        sample[index] = DeltaStar[g][q];
        ˜˜˜˜˜˜ ^˜˜˜˜
Utility_v2.cpp:1772:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        sample[index] = DeltaStar[g][q];
                        ˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1772:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        sample[index] = DeltaStar[g][q];
                        ˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:1783:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (it = chol[i].begin(); it != chol[i].end(); it++) {
              ˜˜˜˜ ^
Utility_v2.cpp:1783:43: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (it = chol[i].begin(); it != chol[i].end(); it++) {
                                     ˜˜˜˜ ^
Utility_v2.cpp:1790:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        sum += value * sample[j];
                       ˜˜˜˜˜˜ ^
Utility_v2.cpp:1794:55: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    pot += ran.PotentialGaussian(variance,mean,sample[i]);
                                               ˜˜˜˜˜˜ ^
Utility_v2.cpp:1799:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      sample[k] += mean[k];
      ˜˜˜˜˜˜ ^
Utility_v2.cpp:1799:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      sample[k] += mean[k];
                   ˜˜˜˜ ^
Utility_v2.cpp:1805:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        double DeltaStar = sample[index];
                           ˜˜˜˜˜˜ ^˜˜˜˜
Utility_v2.cpp:1135:15: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
    for (gg = oldComponents[k].size(); gg < Omega[k].size(); gg++) {
            ˜ ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:1468:46: warning: implicit conversion loses integer precision: 'unsigned long' to 'int' [-Wshorten-64-to-32]
      int kk = VinvSparseReversed.size() - k - 1;
          ˜˜   ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜
Utility_v2.cpp:1469:46: warning: implicit conversion loses integer precision: 'unsigned long' to 'int' [-Wshorten-64-to-32]
      int rr = VinvSparseReversed.size() - r - 1;
          ˜˜   ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜
Utility_v2.cpp:1504:11: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int N = cholReversed.size();
      ˜   ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:1571:32: warning: implicit conversion loses integer precision: 'unsigned long' to 'int' [-Wshorten-64-to-32]
      int kk = chol.size() - k - 1;
          ˜˜   ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜
Utility_v2.cpp:1572:32: warning: implicit conversion loses integer precision: 'unsigned long' to 'int' [-Wshorten-64-to-32]
      int rr = chol.size() - r - 1;
          ˜˜   ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜^˜˜
Utility_v2.cpp:1636:21: warning: implicit conversion loses integer precision: 'unsigned long' to 'int' [-Wshorten-64-to-32]
  for (i = u.size() - 1; i >= 0; i--) {
         ˜ ˜˜˜˜˜˜˜˜˜^˜˜
Utility_v2.cpp:1822:31: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  oldCliqueTransformed.resize(*nClique);
  ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜        ^˜˜˜˜˜˜˜
Utility_v2.cpp:1823:35: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  oldComponentsTransformed.resize(*nClique);
  ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜        ^˜˜˜˜˜˜˜
Utility_v2.cpp:1828:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    oldCliqueTransformed[k] = oldClique[k];
    ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1830:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    oldComponentsTransformed[k].resize(nOldComponents[k]);
    ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1830:40: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    oldComponentsTransformed[k].resize(nOldComponents[k]);
    ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜           ^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
Utility_v2.cpp:1833:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      oldComponentsTransformed[k][i] = oldComponents[nr];
      ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1833:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      oldComponentsTransformed[k][i] = oldComponents[nr];
      ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:1846:27: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  OmegaTransformed.resize(*nClique);
  ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜        ^˜˜˜˜˜˜˜
Utility_v2.cpp:1852:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    OmegaTransformed[k].resize(size);
    ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1852:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    OmegaTransformed[k].resize(size);
    ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜           ^˜˜˜
Utility_v2.cpp:1855:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      OmegaTransformed[k][i].resize(size);
      ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1855:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      OmegaTransformed[k][i].resize(size);
      ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:1855:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      OmegaTransformed[k][i].resize(size);
      ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜              ^˜˜˜
Utility_v2.cpp:1859:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaTransformed[k][i][j] = Omega[nr];
        ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1859:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaTransformed[k][i][j] = Omega[nr];
        ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:1859:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaTransformed[k][i][j] = Omega[nr];
        ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜       ^
Utility_v2.cpp:1860:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaTransformed[k][j][i] = Omega[nr];
        ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1860:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaTransformed[k][j][i] = Omega[nr];
        ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:1860:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        OmegaTransformed[k][j][i] = Omega[nr];
        ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜       ^
Utility_v2.cpp:1877:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    for (i = 0; i < OmegaTransformed[k].size(); i++)
                    ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1879:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Omega[nr] = OmegaTransformed[k][i][j];
                    ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
Utility_v2.cpp:1879:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Omega[nr] = OmegaTransformed[k][i][j];
                    ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
Utility_v2.cpp:1879:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Omega[nr] = OmegaTransformed[k][i][j];
                    ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜       ^
448 warnings generated.
clang++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include    -fPIC  -mtune=native -g -O2 -Wall -pedantic -Wconversion -c diffExpressed_main.cpp -o diffExpressed_main.o
In file included from diffExpressed_main.cpp:16:
./Random.h:19:9: warning: 'PI' macro redefined
#define PI         3.14159265
        ^
/Library/Frameworks/R.framework/Resources/include/R_ext/Constants.h:32:9: note: previous definition is here
#define PI             M_PI
        ^
In file included from diffExpressed_main.cpp:22:
In file included from ./PotentialX.h:6:
./PotentialXqg.h:55:29: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double var0 = str->sigma2[q][g] * str->phi[q][g];
                ˜˜˜         ^
./PotentialXqg.h:55:32: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double var0 = str->sigma2[q][g] * str->phi[q][g];
                ˜˜˜            ^
./PotentialXqg.h:55:46: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double var0 = str->sigma2[q][g] * str->phi[q][g];
                                    ˜˜˜      ^
./PotentialXqg.h:55:49: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double var0 = str->sigma2[q][g] * str->phi[q][g];
                                    ˜˜˜         ^
./PotentialXqg.h:56:29: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double var1 = str->sigma2[q][g] / str->phi[q][g];
                ˜˜˜         ^
./PotentialXqg.h:56:32: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double var1 = str->sigma2[q][g] / str->phi[q][g];
                ˜˜˜            ^
./PotentialXqg.h:56:46: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double var1 = str->sigma2[q][g] / str->phi[q][g];
                                    ˜˜˜      ^
./PotentialXqg.h:56:49: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double var1 = str->sigma2[q][g] / str->phi[q][g];
                                    ˜˜˜         ^
./PotentialXqg.h:57:23: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double mm = str->nu[q][g];
              ˜˜˜     ^
./PotentialXqg.h:57:26: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double mm = str->nu[q][g];
              ˜˜˜        ^
./PotentialXqg.h:59:18: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  if (str->delta[q][g] != 0)
      ˜˜˜        ^
./PotentialXqg.h:59:21: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  if (str->delta[q][g] != 0)
      ˜˜˜           ^
./PotentialXqg.h:62:30: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (s = 0; s < str->S[q]; s++)
                      ˜˜˜    ^
./PotentialXqg.h:66:17: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          if (str->psi[q][s] == 0)
              ˜˜˜      ^
./PotentialXqg.h:66:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          if (str->psi[q][s] == 0)
              ˜˜˜         ^
./PotentialXqg.h:68:31: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              mean = mm - str->Delta[q][g];
                          ˜˜˜        ^
./PotentialXqg.h:68:34: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              mean = mm - str->Delta[q][g];
                          ˜˜˜           ^
./PotentialXqg.h:73:31: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              mean = mm + str->Delta[q][g];
                          ˜˜˜        ^
./PotentialXqg.h:73:34: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              mean = mm + str->Delta[q][g];
                          ˜˜˜           ^
./PotentialXqg.h:79:49: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          pot += ran.PotentialGaussian(var,mean,str->x[q][g][s]);
                                                ˜˜˜    ^
./PotentialXqg.h:79:52: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          pot += ran.PotentialGaussian(var,mean,str->x[q][g][s]);
                                                ˜˜˜       ^
./PotentialXqg.h:79:55: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          pot += ran.PotentialGaussian(var,mean,str->x[q][g][s]);
                                                ˜˜˜          ^
./PotentialXqg.h:86:30: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (s = 0; s < str->S[q]; s++)
                      ˜˜˜    ^
./PotentialXqg.h:88:26: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double var = str->psi[q][s] == 0 ? var0 : var1;
                       ˜˜˜      ^
./PotentialXqg.h:88:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double var = str->psi[q][s] == 0 ? var0 : var1;
                       ˜˜˜         ^
./PotentialXqg.h:92:49: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          pot += ran.PotentialGaussian(var,mean,str->x[q][g][s]);
                                                ˜˜˜    ^
./PotentialXqg.h:92:52: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          pot += ran.PotentialGaussian(var,mean,str->x[q][g][s]);
                                                ˜˜˜       ^
./PotentialXqg.h:92:55: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          pot += ran.PotentialGaussian(var,mean,str->x[q][g][s]);
                                                ˜˜˜          ^
In file included from diffExpressed_main.cpp:22:
./PotentialX.h:45:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    delete model[i];
           ˜˜˜˜˜ ^
./PotentialX.h:65:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    pot += model[i]->potential(ran);
           ˜˜˜˜˜ ^
In file included from diffExpressed_main.cpp:23:
In file included from ./PotentialNu.h:5:
./PotentialNug.h:55:21: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  Sigma.resize(str->Q);
  ˜˜˜˜˜        ˜˜˜˜˜^
./PotentialNug.h:58:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Sigma[q].resize(str->Q);
    ˜˜˜˜˜ ^
./PotentialNug.h:58:26: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Sigma[q].resize(str->Q);
    ˜˜˜˜˜           ˜˜˜˜˜^
./PotentialNug.h:63:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[p][p] = str->gamma2 * str->tau2Rho[p];
      ˜˜˜˜˜ ^
./PotentialNug.h:63:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[p][p] = str->gamma2 * str->tau2Rho[p];
      ˜˜˜˜˜    ^
./PotentialNug.h:63:48: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[p][p] = str->gamma2 * str->tau2Rho[p];
                                  ˜˜˜          ^
./PotentialNug.h:64:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[p][p] *= exp(str->a[p] * log(str->sigma2[p][g]));
      ˜˜˜˜˜ ^
./PotentialNug.h:64:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[p][p] *= exp(str->a[p] * log(str->sigma2[p][g]));
      ˜˜˜˜˜    ^
./PotentialNug.h:64:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[p][p] *= exp(str->a[p] * log(str->sigma2[p][g]));
                         ˜˜˜    ^
./PotentialNug.h:64:54: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[p][p] *= exp(str->a[p] * log(str->sigma2[p][g]));
                                         ˜˜˜         ^
./PotentialNug.h:64:57: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Sigma[p][p] *= exp(str->a[p] * log(str->sigma2[p][g]));
                                         ˜˜˜            ^
./PotentialNug.h:70:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[p][q] = str->gamma2;
        ˜˜˜˜˜ ^
./PotentialNug.h:70:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[p][q] = str->gamma2;
        ˜˜˜˜˜    ^
./PotentialNug.h:71:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[p][q] *= str->rho[p][q];
        ˜˜˜˜˜ ^
./PotentialNug.h:71:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[p][q] *= str->rho[p][q];
        ˜˜˜˜˜    ^
./PotentialNug.h:71:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[p][q] *= str->rho[p][q];
                       ˜˜˜      ^
./PotentialNug.h:71:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[p][q] *= str->rho[p][q];
                       ˜˜˜         ^
./PotentialNug.h:72:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[p][q] *= sqrt(str->tau2Rho[p] * str->tau2Rho[q]);
        ˜˜˜˜˜ ^
./PotentialNug.h:72:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[p][q] *= sqrt(str->tau2Rho[p] * str->tau2Rho[q]);
        ˜˜˜˜˜    ^
./PotentialNug.h:72:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[p][q] *= sqrt(str->tau2Rho[p] * str->tau2Rho[q]);
                            ˜˜˜          ^
./PotentialNug.h:72:53: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[p][q] *= sqrt(str->tau2Rho[p] * str->tau2Rho[q]);
                                              ˜˜˜          ^
./PotentialNug.h:73:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
        ˜˜˜˜˜ ^
./PotentialNug.h:73:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
        ˜˜˜˜˜    ^
./PotentialNug.h:73:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                  ˜˜˜    ^
./PotentialNug.h:73:56: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                  ˜˜˜         ^
./PotentialNug.h:73:59: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                  ˜˜˜            ^
./PotentialNug.h:73:72: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                                       ˜˜˜    ^
./PotentialNug.h:73:93: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                                                       ˜˜˜         ^
./PotentialNug.h:73:96: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                                                       ˜˜˜            ^
./PotentialNug.h:75:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[q][p] = Sigma[p][q];
        ˜˜˜˜˜ ^
./PotentialNug.h:75:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[q][p] = Sigma[p][q];
        ˜˜˜˜˜    ^
./PotentialNug.h:75:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[q][p] = Sigma[p][q];
                      ˜˜˜˜˜ ^
./PotentialNug.h:75:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Sigma[q][p] = Sigma[p][q];
                      ˜˜˜˜˜    ^
./PotentialNug.h:79:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    value[q] = str->nu[q][g];
    ˜˜˜˜˜ ^
./PotentialNug.h:79:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    value[q] = str->nu[q][g];
               ˜˜˜     ^
./PotentialNug.h:79:27: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    value[q] = str->nu[q][g];
               ˜˜˜        ^
In file included from diffExpressed_main.cpp:23:
./PotentialNu.h:57:36: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  vector<vector<double> > Rho(str->Q);
                          ˜˜˜ ˜˜˜˜˜^
./PotentialNu.h:60:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Rho[p].resize(Q);
    ˜˜˜ ^
./PotentialNu.h:60:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Rho[p].resize(Q);
    ˜˜˜           ^
./PotentialNu.h:64:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Rho[p][q] = str->rho[p][q];
      ˜˜˜ ^
./PotentialNu.h:64:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Rho[p][q] = str->rho[p][q];
      ˜˜˜    ^
./PotentialNu.h:64:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Rho[p][q] = str->rho[p][q];
                  ˜˜˜      ^
./PotentialNu.h:64:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Rho[p][q] = str->rho[p][q];
                  ˜˜˜         ^
./PotentialNu.h:85:26: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  vector<double> vv(str->Q);
                 ˜˜ ˜˜˜˜˜^
./PotentialNu.h:87:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    vv[p] = str->gamma2 * str->tau2Rho[p];
    ˜˜ ^
./PotentialNu.h:87:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    vv[p] = str->gamma2 * str->tau2Rho[p];
                          ˜˜˜          ^
./PotentialNu.h:89:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  vector<double> value(Q);
                 ˜˜˜˜˜ ^
./PotentialNu.h:98:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double variance = vv[p] * exp(str->a[p] * log(str->sigma2[p][g]));
                            ˜˜ ^
./PotentialNu.h:98:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double variance = vv[p] * exp(str->a[p] * log(str->sigma2[p][g]));
                                        ˜˜˜    ^
./PotentialNu.h:98:62: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double variance = vv[p] * exp(str->a[p] * log(str->sigma2[p][g]));
                                                        ˜˜˜         ^
./PotentialNu.h:98:65: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double variance = vv[p] * exp(str->a[p] * log(str->sigma2[p][g]));
                                                        ˜˜˜            ^
./PotentialNu.h:100:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          value[p] = str->nu[p][g] / sqrt(variance);
          ˜˜˜˜˜ ^
./PotentialNu.h:100:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          value[p] = str->nu[p][g] / sqrt(variance);
                     ˜˜˜     ^
./PotentialNu.h:100:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          value[p] = str->nu[p][g] / sqrt(variance);
                     ˜˜˜        ^
In file included from diffExpressed_main.cpp:24:
In file included from ./PotentialDDelta.h:5:
./PotentialDDeltag.h:56:17: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  R.resize(str->Q);
  ˜        ˜˜˜˜˜^
./PotentialDDeltag.h:59:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[q].resize(str->Q);
    ˜ ^
./PotentialDDeltag.h:59:22: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    R[q].resize(str->Q);
    ˜           ˜˜˜˜˜^
./PotentialDDeltag.h:64:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][p] = str->c2 * str->tau2R[p];
      ˜ ^
./PotentialDDeltag.h:64:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][p] = str->c2 * str->tau2R[p];
      ˜    ^
./PotentialDDeltag.h:64:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][p] = str->c2 * str->tau2R[p];
                          ˜˜˜        ^
./PotentialDDeltag.h:65:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
      ˜ ^
./PotentialDDeltag.h:65:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
      ˜    ^
./PotentialDDeltag.h:65:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
                     ˜˜˜    ^
./PotentialDDeltag.h:65:50: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
                                     ˜˜˜         ^
./PotentialDDeltag.h:65:53: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      R[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
                                     ˜˜˜            ^
./PotentialDDeltag.h:71:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] = str->c2;
        ˜ ^
./PotentialDDeltag.h:71:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] = str->c2;
        ˜    ^
./PotentialDDeltag.h:72:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= str->r[p][q];
        ˜ ^
./PotentialDDeltag.h:72:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= str->r[p][q];
        ˜    ^
./PotentialDDeltag.h:72:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= str->r[p][q];
                   ˜˜˜    ^
./PotentialDDeltag.h:72:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= str->r[p][q];
                   ˜˜˜       ^
./PotentialDDeltag.h:73:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
        ˜ ^
./PotentialDDeltag.h:73:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
        ˜    ^
./PotentialDDeltag.h:73:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                        ˜˜˜        ^
./PotentialDDeltag.h:73:45: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                                        ˜˜˜        ^
./PotentialDDeltag.h:74:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
        ˜ ^
./PotentialDDeltag.h:74:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
        ˜    ^
./PotentialDDeltag.h:74:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                              ˜˜˜    ^
./PotentialDDeltag.h:74:52: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                              ˜˜˜         ^
./PotentialDDeltag.h:74:55: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                              ˜˜˜            ^
./PotentialDDeltag.h:74:68: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                   ˜˜˜    ^
./PotentialDDeltag.h:74:89: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                                   ˜˜˜         ^
./PotentialDDeltag.h:74:92: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                                   ˜˜˜            ^
./PotentialDDeltag.h:76:4: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[q][p] = R[p][q];
        ˜ ^
./PotentialDDeltag.h:76:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[q][p] = R[p][q];
        ˜    ^
./PotentialDDeltag.h:76:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[q][p] = R[p][q];
                  ˜ ^
./PotentialDDeltag.h:76:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        R[q][p] = R[p][q];
                  ˜    ^
./PotentialDDeltag.h:80:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    value[q] = str->Delta[q][g];
    ˜˜˜˜˜ ^
./PotentialDDeltag.h:80:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    value[q] = str->Delta[q][g];
               ˜˜˜        ^
./PotentialDDeltag.h:80:30: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    value[q] = str->Delta[q][g];
               ˜˜˜           ^
In file included from diffExpressed_main.cpp:24:
./PotentialDDelta.h:59:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  Cov.resize(Q);
  ˜˜˜        ^
./PotentialDDelta.h:61:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Cov[p].resize(Q);
    ˜˜˜ ^
./PotentialDDelta.h:61:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    Cov[p].resize(Q);
    ˜˜˜           ^
./PotentialDDelta.h:65:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Cov[p][q] = str->r[p][q];
      ˜˜˜ ^
./PotentialDDelta.h:65:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Cov[p][q] = str->r[p][q];
      ˜˜˜    ^
./PotentialDDelta.h:65:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Cov[p][q] = str->r[p][q];
                  ˜˜˜    ^
./PotentialDDelta.h:65:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      Cov[p][q] = str->r[p][q];
                  ˜˜˜       ^
./PotentialDDelta.h:87:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  vector<double> vv(Q);
                 ˜˜ ^
./PotentialDDelta.h:89:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    vv[p] = str->c2 * str->tau2R[p];
    ˜˜ ^
./PotentialDDelta.h:89:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    vv[p] = str->c2 * str->tau2R[p];
                      ˜˜˜        ^
./PotentialDDelta.h:91:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  vector<double> value(Q);
                 ˜˜˜˜˜ ^
./PotentialDDelta.h:100:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double variance = vv[p] * exp(str->b[p] * log(str->sigma2[p][g]));
                            ˜˜ ^
./PotentialDDelta.h:100:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double variance = vv[p] * exp(str->b[p] * log(str->sigma2[p][g]));
                                        ˜˜˜    ^
./PotentialDDelta.h:100:62: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double variance = vv[p] * exp(str->b[p] * log(str->sigma2[p][g]));
                                                        ˜˜˜         ^
./PotentialDDelta.h:100:65: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double variance = vv[p] * exp(str->b[p] * log(str->sigma2[p][g]));
                                                        ˜˜˜            ^
./PotentialDDelta.h:102:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          value[p] = str->Delta[p][g] / sqrt(variance);
          ˜˜˜˜˜ ^
./PotentialDDelta.h:102:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          value[p] = str->Delta[p][g] / sqrt(variance);
                     ˜˜˜        ^
./PotentialDDelta.h:102:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          value[p] = str->Delta[p][g] / sqrt(variance);
                     ˜˜˜           ^
In file included from diffExpressed_main.cpp:25:
./PotentialA.h:55:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      if (str->a[q] == 0.0)
          ˜˜˜    ^
./PotentialA.h:57:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      else if (str->a[q] == 1.0)
               ˜˜˜    ^
./PotentialA.h:62:59: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          pot += ran.PotentialBeta(str->alphaA,str->betaA,str->a[q]);
                                                          ˜˜˜    ^
In file included from diffExpressed_main.cpp:26:
./PotentialB.h:55:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      if (str->b[q] == 0.0)
          ˜˜˜    ^
./PotentialB.h:57:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      else if (str->b[q] == 1.0)
               ˜˜˜    ^
./PotentialB.h:62:59: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          pot += ran.PotentialBeta(str->alphaB,str->betaB,str->b[q]);
                                                          ˜˜˜    ^
In file included from diffExpressed_main.cpp:29:
./PotentialDelta.h:60:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (str->delta[q][g] == 1)
                ˜˜˜        ^
./PotentialDelta.h:60:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (str->delta[q][g] == 1)
                ˜˜˜           ^
./PotentialDelta.h:61:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              pot += - log(str->xi[q]);
                           ˜˜˜     ^
./PotentialDelta.h:63:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              pot += - log(1.0 - str->xi[q]);
                                 ˜˜˜     ^
./PotentialDelta.h:71:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          if (str->delta[0][g] == 1)
              ˜˜˜           ^
In file included from diffExpressed_main.cpp:30:
./PotentialXi.h:58:60: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        pot += ran.PotentialBeta(str->alphaXi,str->betaXi,str->xi[q]);
                                                          ˜˜˜     ^
In file included from diffExpressed_main.cpp:31:
In file included from ./PotentialSigma2.h:5:
./PotentialSigma2qg.h:53:26: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double param2 = str->l[q] / str->t[q];
                  ˜˜˜    ^
./PotentialSigma2qg.h:53:38: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double param2 = str->l[q] / str->t[q];
                              ˜˜˜    ^
./PotentialSigma2qg.h:54:26: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double param1 = str->l[q] * param2;
                  ˜˜˜    ^
./PotentialSigma2qg.h:56:61: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double pot = ran.PotentialGamma(param1,param2,str->sigma2[q][g]);
                                                ˜˜˜         ^
./PotentialSigma2qg.h:56:64: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double pot = ran.PotentialGamma(param1,param2,str->sigma2[q][g]);
                                                ˜˜˜            ^
In file included from diffExpressed_main.cpp:31:
./PotentialSigma2.h:45:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    delete model[i];
           ˜˜˜˜˜ ^
./PotentialSigma2.h:65:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    pot += model[i]->potential(ran);
           ˜˜˜˜˜ ^
In file included from diffExpressed_main.cpp:32:
In file included from ./PotentialPhi.h:5:
./PotentialPhiqg.h:55:31: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double param2 = str->lambda[q] / str->theta[q];
                  ˜˜˜         ^
./PotentialPhiqg.h:55:47: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double param2 = str->lambda[q] / str->theta[q];
                                   ˜˜˜        ^
./PotentialPhiqg.h:56:31: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double param1 = str->lambda[q] * param2;
                  ˜˜˜         ^
./PotentialPhiqg.h:58:52: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  pot += ran.PotentialGamma(param1,param2,str->phi[q][g]);
                                          ˜˜˜      ^
./PotentialPhiqg.h:58:55: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  pot += ran.PotentialGamma(param1,param2,str->phi[q][g]);
                                          ˜˜˜         ^
In file included from diffExpressed_main.cpp:32:
./PotentialPhi.h:45:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    delete model[i];
           ˜˜˜˜˜ ^
./PotentialPhi.h:65:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    pot += model[i]->potential(ran);
           ˜˜˜˜˜ ^
In file included from diffExpressed_main.cpp:33:
./PotentialSum.h:31:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->term[i] = term[i]->copy();
    ˜˜˜˜       ^
./PotentialSum.h:31:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->term[i] = term[i]->copy();
                    ˜˜˜˜ ^
./PotentialSum.h:42:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    delete term[i];
           ˜˜˜˜ ^
./PotentialSum.h:62:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    pot += term[i]->potential(ran);
           ˜˜˜˜ ^
In file included from diffExpressed_main.cpp:35:
./UpdateAMH.h:60:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      double oldValue = str->a[q];
                        ˜˜˜    ^
./UpdateAMH.h:145:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      str->a[q] = newValue;
      ˜˜˜    ^
./UpdateAMH.h:149:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      str->a[q] = oldValue;
      ˜˜˜    ^
./UpdateAMH.h:154:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          str->a[q] = newValue;
          ˜˜˜    ^
In file included from diffExpressed_main.cpp:36:
./UpdateBMH.h:60:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      double oldValue = str->b[q];
                        ˜˜˜    ^
./UpdateBMH.h:145:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      str->b[q] = newValue;
      ˜˜˜    ^
./UpdateBMH.h:149:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      str->b[q] = oldValue;
      ˜˜˜    ^
./UpdateBMH.h:154:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          str->b[q] = newValue;
          ˜˜˜    ^
In file included from diffExpressed_main.cpp:37:
./UpdateC2Gibbs.h:75:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nOn += str->delta[q][g];
               ˜˜˜        ^
./UpdateC2Gibbs.h:75:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nOn += str->delta[q][g];
               ˜˜˜           ^
./UpdateC2Gibbs.h:80:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          varInv.resize(str->Q);
          ˜˜˜˜˜˜        ˜˜˜˜˜^
./UpdateC2Gibbs.h:82:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          for (p = 0; p < str->Q; p++) varInv[p].resize(str->Q);
                                       ˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:82:55: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          for (p = 0; p < str->Q; p++) varInv[p].resize(str->Q);
                                       ˜˜˜˜˜˜           ˜˜˜˜˜^
./UpdateC2Gibbs.h:86:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                varInv[p][q] = 1;
                ˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:86:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                varInv[p][q] = 1;
                ˜˜˜˜˜˜    ^
./UpdateC2Gibbs.h:87:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                if (p != q) varInv[p][q] *= str->r[p][q];
                            ˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:87:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                if (p != q) varInv[p][q] *= str->r[p][q];
                            ˜˜˜˜˜˜    ^
./UpdateC2Gibbs.h:87:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                if (p != q) varInv[p][q] *= str->r[p][q];
                                            ˜˜˜    ^
./UpdateC2Gibbs.h:87:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                if (p != q) varInv[p][q] *= str->r[p][q];
                                            ˜˜˜       ^
./UpdateC2Gibbs.h:88:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                varInv[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                ˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:88:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                varInv[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                ˜˜˜˜˜˜    ^
./UpdateC2Gibbs.h:88:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                varInv[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                                     ˜˜˜        ^
./UpdateC2Gibbs.h:88:51: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                varInv[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                                                     ˜˜˜        ^
./UpdateC2Gibbs.h:89:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                ˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:89:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                ˜˜˜˜˜˜    ^
./UpdateC2Gibbs.h:89:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                           ˜˜˜    ^
./UpdateC2Gibbs.h:89:58: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                           ˜˜˜         ^
./UpdateC2Gibbs.h:89:61: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                           ˜˜˜            ^
./UpdateC2Gibbs.h:89:74: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                                ˜˜˜    ^
./UpdateC2Gibbs.h:89:95: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                                                ˜˜˜         ^
./UpdateC2Gibbs.h:89:98: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                                                ˜˜˜            ^
./UpdateC2Gibbs.h:91:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                varInv[q][p] = varInv[p][q];
                ˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:91:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                varInv[q][p] = varInv[p][q];
                ˜˜˜˜˜˜    ^
./UpdateC2Gibbs.h:91:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                varInv[q][p] = varInv[p][q];
                               ˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:91:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                varInv[q][p] = varInv[p][q];
                               ˜˜˜˜˜˜    ^
./UpdateC2Gibbs.h:98:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vector<double> Delta(nOn);
                         ˜˜˜˜˜ ^˜˜
./UpdateC2Gibbs.h:100:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          varInvRed.resize(nOn);
          ˜˜˜˜˜˜˜˜˜        ^˜˜
./UpdateC2Gibbs.h:102:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInvRed[q].resize(nOn);
            ˜˜˜˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:102:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInvRed[q].resize(nOn);
            ˜˜˜˜˜˜˜˜˜           ^˜˜
./UpdateC2Gibbs.h:107:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              if (str->delta[q][g] == 1)
                  ˜˜˜        ^
./UpdateC2Gibbs.h:107:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              if (str->delta[q][g] == 1)
                  ˜˜˜           ^
./UpdateC2Gibbs.h:109:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  Delta[qq] = str->Delta[q][g];
                  ˜˜˜˜˜ ^˜
./UpdateC2Gibbs.h:109:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  Delta[qq] = str->Delta[q][g];
                              ˜˜˜        ^
./UpdateC2Gibbs.h:109:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  Delta[qq] = str->Delta[q][g];
                              ˜˜˜           ^
./UpdateC2Gibbs.h:117:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              if (str->delta[q][g] == 1)
                  ˜˜˜        ^
./UpdateC2Gibbs.h:117:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              if (str->delta[q][g] == 1)
                  ˜˜˜           ^
./UpdateC2Gibbs.h:122:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      if (str->delta[p][g] == 1)
                          ˜˜˜        ^
./UpdateC2Gibbs.h:122:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      if (str->delta[p][g] == 1)
                          ˜˜˜           ^
./UpdateC2Gibbs.h:124:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                          varInvRed[qq][pp] = varInv[q][p];
                          ˜˜˜˜˜˜˜˜˜ ^˜
./UpdateC2Gibbs.h:124:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                          varInvRed[qq][pp] = varInv[q][p];
                          ˜˜˜˜˜˜˜˜˜     ^˜
./UpdateC2Gibbs.h:124:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                          varInvRed[qq][pp] = varInv[q][p];
                                              ˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:124:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                          varInvRed[qq][pp] = varInv[q][p];
                                              ˜˜˜˜˜˜    ^
./UpdateC2Gibbs.h:214:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nOn += str->delta[q][g];
               ˜˜˜        ^
./UpdateC2Gibbs.h:214:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nOn += str->delta[q][g];
               ˜˜˜           ^
./UpdateC2Gibbs.h:219:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          var.resize(str->Q);
          ˜˜˜        ˜˜˜˜˜^
./UpdateC2Gibbs.h:221:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          for (p = 0; p < str->Q; p++) var[p].resize(str->Q);
                                       ˜˜˜ ^
./UpdateC2Gibbs.h:221:52: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          for (p = 0; p < str->Q; p++) var[p].resize(str->Q);
                                       ˜˜˜           ˜˜˜˜˜^
./UpdateC2Gibbs.h:224:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] = str->c2 * str->tau2R[p];
              ˜˜˜ ^
./UpdateC2Gibbs.h:224:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] = str->c2 * str->tau2R[p];
              ˜˜˜    ^
./UpdateC2Gibbs.h:224:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] = str->c2 * str->tau2R[p];
                                    ˜˜˜        ^
./UpdateC2Gibbs.h:225:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
              ˜˜˜ ^
./UpdateC2Gibbs.h:225:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
              ˜˜˜    ^
./UpdateC2Gibbs.h:225:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
                               ˜˜˜    ^
./UpdateC2Gibbs.h:225:53: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
                                               ˜˜˜         ^
./UpdateC2Gibbs.h:225:56: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
                                               ˜˜˜            ^
./UpdateC2Gibbs.h:231:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] = str->c2;
                ˜˜˜ ^
./UpdateC2Gibbs.h:231:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] = str->c2;
                ˜˜˜    ^
./UpdateC2Gibbs.h:232:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->r[p][q];
                ˜˜˜ ^
./UpdateC2Gibbs.h:232:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->r[p][q];
                ˜˜˜    ^
./UpdateC2Gibbs.h:232:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->r[p][q];
                             ˜˜˜    ^
./UpdateC2Gibbs.h:232:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->r[p][q];
                             ˜˜˜       ^
./UpdateC2Gibbs.h:233:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                ˜˜˜ ^
./UpdateC2Gibbs.h:233:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                ˜˜˜    ^
./UpdateC2Gibbs.h:233:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                                  ˜˜˜        ^
./UpdateC2Gibbs.h:233:48: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                                                  ˜˜˜        ^
./UpdateC2Gibbs.h:234:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                ˜˜˜ ^
./UpdateC2Gibbs.h:234:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                ˜˜˜    ^
./UpdateC2Gibbs.h:234:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                        ˜˜˜    ^
./UpdateC2Gibbs.h:234:55: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                        ˜˜˜         ^
./UpdateC2Gibbs.h:234:58: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                        ˜˜˜            ^
./UpdateC2Gibbs.h:234:71: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                             ˜˜˜    ^
./UpdateC2Gibbs.h:234:92: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                                             ˜˜˜         ^
./UpdateC2Gibbs.h:234:95: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                                             ˜˜˜            ^
./UpdateC2Gibbs.h:236:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                ˜˜˜ ^
./UpdateC2Gibbs.h:236:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                ˜˜˜    ^
./UpdateC2Gibbs.h:236:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                            ˜˜˜ ^
./UpdateC2Gibbs.h:236:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                            ˜˜˜    ^
./UpdateC2Gibbs.h:239:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vector<double> mean(str->Q);
                         ˜˜˜˜ ˜˜˜˜˜^
./UpdateC2Gibbs.h:240:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          for (p = 0; p < str->Q; p++) mean[p] = 0.0;
                                       ˜˜˜˜ ^
./UpdateC2Gibbs.h:246:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                str->Delta[p][g] = newDDelta[p];
                ˜˜˜        ^
./UpdateC2Gibbs.h:246:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                str->Delta[p][g] = newDDelta[p];
                ˜˜˜           ^
./UpdateC2Gibbs.h:246:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                str->Delta[p][g] = newDDelta[p];
                                   ˜˜˜˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:250:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              vector<double> Delta1(nOn);
                             ˜˜˜˜˜˜ ^˜˜
./UpdateC2Gibbs.h:251:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              vector<double> Delta2(str->Q - nOn);
                             ˜˜˜˜˜˜ ˜˜˜˜˜˜˜^˜˜˜˜
./UpdateC2Gibbs.h:252:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              vector<double> mu1(nOn);
                             ˜˜˜ ^˜˜
./UpdateC2Gibbs.h:253:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              vector<double> mu2(str->Q - nOn);
                             ˜˜˜ ˜˜˜˜˜˜˜^˜˜˜˜
./UpdateC2Gibbs.h:254:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              vector<vector<double> > sigma11(nOn);
                                      ˜˜˜˜˜˜˜ ^˜˜
./UpdateC2Gibbs.h:257:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                sigma11[q].resize(nOn);
                ˜˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:257:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                sigma11[q].resize(nOn);
                ˜˜˜˜˜˜˜           ^˜˜
./UpdateC2Gibbs.h:258:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              vector<vector<double> > sigma12(nOn);
                                      ˜˜˜˜˜˜˜ ^˜˜
./UpdateC2Gibbs.h:260:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                sigma12[q].resize(str->Q - nOn);
                ˜˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:260:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                sigma12[q].resize(str->Q - nOn);
                ˜˜˜˜˜˜˜           ˜˜˜˜˜˜˜^˜˜˜˜
./UpdateC2Gibbs.h:261:47: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              vector<vector<double> > sigma21(str->Q - nOn);
                                      ˜˜˜˜˜˜˜ ˜˜˜˜˜˜˜^˜˜˜˜
./UpdateC2Gibbs.h:263:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                sigma21[q].resize(nOn);
                ˜˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:263:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                sigma21[q].resize(nOn);
                ˜˜˜˜˜˜˜           ^˜˜
./UpdateC2Gibbs.h:264:47: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              vector<vector<double> > sigma22(str->Q - nOn);
                                      ˜˜˜˜˜˜˜ ˜˜˜˜˜˜˜^˜˜˜˜
./UpdateC2Gibbs.h:266:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                sigma22[q].resize(str->Q - nOn);
                ˜˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:266:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                sigma22[q].resize(str->Q - nOn);
                ˜˜˜˜˜˜˜           ˜˜˜˜˜˜˜^˜˜˜˜
./UpdateC2Gibbs.h:272:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  if (str->delta[q][g] == 1)
                      ˜˜˜        ^
./UpdateC2Gibbs.h:272:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  if (str->delta[q][g] == 1)
                      ˜˜˜           ^
./UpdateC2Gibbs.h:274:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      Delta1[q1] = str->Delta[q][g];
                      ˜˜˜˜˜˜ ^˜
./UpdateC2Gibbs.h:274:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      Delta1[q1] = str->Delta[q][g];
                                   ˜˜˜        ^
./UpdateC2Gibbs.h:274:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      Delta1[q1] = str->Delta[q][g];
                                   ˜˜˜           ^
./UpdateC2Gibbs.h:275:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      mu1[q1] = mean[q];
                      ˜˜˜ ^˜
./UpdateC2Gibbs.h:275:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      mu1[q1] = mean[q];
                                ˜˜˜˜ ^
./UpdateC2Gibbs.h:280:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      Delta2[q2] = str->Delta[q][g];
                      ˜˜˜˜˜˜ ^˜
./UpdateC2Gibbs.h:280:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      Delta2[q2] = str->Delta[q][g];
                                   ˜˜˜        ^
./UpdateC2Gibbs.h:280:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      Delta2[q2] = str->Delta[q][g];
                                   ˜˜˜           ^
./UpdateC2Gibbs.h:281:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      mu2[q2] = mean[q];
                      ˜˜˜ ^˜
./UpdateC2Gibbs.h:281:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      mu2[q2] = mean[q];
                                ˜˜˜˜ ^
./UpdateC2Gibbs.h:290:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  if (str->delta[q][g] == 1)
                      ˜˜˜        ^
./UpdateC2Gibbs.h:290:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  if (str->delta[q][g] == 1)
                      ˜˜˜           ^
./UpdateC2Gibbs.h:297:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                          if (str->delta[p][g] == 1)
                              ˜˜˜        ^
./UpdateC2Gibbs.h:297:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                          if (str->delta[p][g] == 1)
                              ˜˜˜           ^
./UpdateC2Gibbs.h:299:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                              sigma11[q1][p1] = var[q][p];
                              ˜˜˜˜˜˜˜ ^˜
./UpdateC2Gibbs.h:299:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                              sigma11[q1][p1] = var[q][p];
                              ˜˜˜˜˜˜˜     ^˜
./UpdateC2Gibbs.h:299:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                              sigma11[q1][p1] = var[q][p];
                                                ˜˜˜ ^
./UpdateC2Gibbs.h:299:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                              sigma11[q1][p1] = var[q][p];
                                                ˜˜˜    ^
./UpdateC2Gibbs.h:304:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                              sigma12[q1][p2] = var[q][p];
                              ˜˜˜˜˜˜˜ ^˜
./UpdateC2Gibbs.h:304:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                              sigma12[q1][p2] = var[q][p];
                              ˜˜˜˜˜˜˜     ^˜
./UpdateC2Gibbs.h:304:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                              sigma12[q1][p2] = var[q][p];
                                                ˜˜˜ ^
./UpdateC2Gibbs.h:304:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                              sigma12[q1][p2] = var[q][p];
                                                ˜˜˜    ^
./UpdateC2Gibbs.h:317:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                          if (str->delta[p][g] == 1)
                              ˜˜˜        ^
./UpdateC2Gibbs.h:317:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                          if (str->delta[p][g] == 1)
                              ˜˜˜           ^
./UpdateC2Gibbs.h:319:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                              sigma21[q2][p1] = var[q][p];
                              ˜˜˜˜˜˜˜ ^˜
./UpdateC2Gibbs.h:319:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                              sigma21[q2][p1] = var[q][p];
                              ˜˜˜˜˜˜˜     ^˜
./UpdateC2Gibbs.h:319:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                              sigma21[q2][p1] = var[q][p];
                                                ˜˜˜ ^
./UpdateC2Gibbs.h:319:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                              sigma21[q2][p1] = var[q][p];
                                                ˜˜˜    ^
./UpdateC2Gibbs.h:324:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                              sigma22[q2][p2] = var[q][p];
                              ˜˜˜˜˜˜˜ ^˜
./UpdateC2Gibbs.h:324:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                              sigma22[q2][p2] = var[q][p];
                              ˜˜˜˜˜˜˜     ^˜
./UpdateC2Gibbs.h:324:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                              sigma22[q2][p2] = var[q][p];
                                                ˜˜˜ ^
./UpdateC2Gibbs.h:324:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                              sigma22[q2][p2] = var[q][p];
                                                ˜˜˜    ^
./UpdateC2Gibbs.h:336:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                diff1[q] -= mu1[q];
                ˜˜˜˜˜ ^
./UpdateC2Gibbs.h:336:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                diff1[q] -= mu1[q];
                            ˜˜˜ ^
./UpdateC2Gibbs.h:343:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                muCond[q] += correct1[q];
                ˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:343:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                muCond[q] += correct1[q];
                             ˜˜˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:346:49: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              vector<vector<double> > sigmaCond(str->Q - nOn);
                                      ˜˜˜˜˜˜˜˜˜ ˜˜˜˜˜˜˜^˜˜˜˜
./UpdateC2Gibbs.h:349:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  sigmaCond[q].resize(str->Q - nOn);
                  ˜˜˜˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:349:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  sigmaCond[q].resize(str->Q - nOn);
                  ˜˜˜˜˜˜˜˜˜           ˜˜˜˜˜˜˜^˜˜˜˜
./UpdateC2Gibbs.h:352:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                    sigmaCond[q][p] = sigma22[q][p] - correctMatrix[q][p];
                    ˜˜˜˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:352:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                    sigmaCond[q][p] = sigma22[q][p] - correctMatrix[q][p];
                    ˜˜˜˜˜˜˜˜˜    ^
./UpdateC2Gibbs.h:352:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                    sigmaCond[q][p] = sigma22[q][p] - correctMatrix[q][p];
                                      ˜˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:352:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                    sigmaCond[q][p] = sigma22[q][p] - correctMatrix[q][p];
                                      ˜˜˜˜˜˜˜    ^
./UpdateC2Gibbs.h:352:55: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                    sigmaCond[q][p] = sigma22[q][p] - correctMatrix[q][p];
                                                      ˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
./UpdateC2Gibbs.h:352:58: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                    sigmaCond[q][p] = sigma22[q][p] - correctMatrix[q][p];
                                                      ˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
./UpdateC2Gibbs.h:359:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  if (str->delta[q][g] == 0)
                      ˜˜˜        ^
./UpdateC2Gibbs.h:359:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  if (str->delta[q][g] == 0)
                      ˜˜˜           ^
./UpdateC2Gibbs.h:361:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      str->Delta[q][g] = newDDelta[qq];
                      ˜˜˜        ^
./UpdateC2Gibbs.h:361:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      str->Delta[q][g] = newDDelta[qq];
                      ˜˜˜           ^
./UpdateC2Gibbs.h:361:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      str->Delta[q][g] = newDDelta[qq];
                                         ˜˜˜˜˜˜˜˜˜ ^˜
In file included from diffExpressed_main.cpp:38:
./UpdateGamma2Gibbs.h:73:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      varInv.resize(str->Q);
      ˜˜˜˜˜˜        ˜˜˜˜˜^
./UpdateGamma2Gibbs.h:75:43: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (p = 0; p < str->Q; p++) varInv[p].resize(str->Q);
                                   ˜˜˜˜˜˜ ^
./UpdateGamma2Gibbs.h:75:58: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (p = 0; p < str->Q; p++) varInv[p].resize(str->Q);
                                   ˜˜˜˜˜˜           ˜˜˜˜˜^
./UpdateGamma2Gibbs.h:79:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] = 1;
            ˜˜˜˜˜˜ ^
./UpdateGamma2Gibbs.h:79:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] = 1;
            ˜˜˜˜˜˜    ^
./UpdateGamma2Gibbs.h:80:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= str->rho[p][q];
                        ˜˜˜˜˜˜ ^
./UpdateGamma2Gibbs.h:80:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= str->rho[p][q];
                        ˜˜˜˜˜˜    ^
./UpdateGamma2Gibbs.h:80:43: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= str->rho[p][q];
                                        ˜˜˜      ^
./UpdateGamma2Gibbs.h:80:46: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= str->rho[p][q];
                                        ˜˜˜         ^
./UpdateGamma2Gibbs.h:81:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2Rho[p] * str->tau2Rho[q]);
            ˜˜˜˜˜˜ ^
./UpdateGamma2Gibbs.h:81:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2Rho[p] * str->tau2Rho[q]);
            ˜˜˜˜˜˜    ^
./UpdateGamma2Gibbs.h:81:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2Rho[p] * str->tau2Rho[q]);
                                 ˜˜˜          ^
./UpdateGamma2Gibbs.h:81:58: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2Rho[p] * str->tau2Rho[q]);
                                                   ˜˜˜          ^
./UpdateGamma2Gibbs.h:82:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
            ˜˜˜˜˜˜ ^
./UpdateGamma2Gibbs.h:82:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
            ˜˜˜˜˜˜    ^
./UpdateGamma2Gibbs.h:82:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                       ˜˜˜    ^
./UpdateGamma2Gibbs.h:82:61: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                       ˜˜˜         ^
./UpdateGamma2Gibbs.h:82:64: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                       ˜˜˜            ^
./UpdateGamma2Gibbs.h:82:77: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                                            ˜˜˜    ^
./UpdateGamma2Gibbs.h:82:98: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                                                            ˜˜˜         ^
./UpdateGamma2Gibbs.h:82:101: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                                                            ˜˜˜            ^
./UpdateGamma2Gibbs.h:84:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
            ˜˜˜˜˜˜ ^
./UpdateGamma2Gibbs.h:84:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
            ˜˜˜˜˜˜    ^
./UpdateGamma2Gibbs.h:84:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
                           ˜˜˜˜˜˜ ^
./UpdateGamma2Gibbs.h:84:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
                           ˜˜˜˜˜˜    ^
./UpdateGamma2Gibbs.h:90:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      vector<double> nu(str->Q);
                     ˜˜ ˜˜˜˜˜^
./UpdateGamma2Gibbs.h:92:5: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nu[q] = str->nu[q][g];
        ˜˜ ^
./UpdateGamma2Gibbs.h:92:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nu[q] = str->nu[q][g];
                ˜˜˜     ^
./UpdateGamma2Gibbs.h:92:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nu[q] = str->nu[q][g];
                ˜˜˜        ^
In file included from diffExpressed_main.cpp:39:
In file included from ./UpdateRC2MH.h:5:
./Cholesky.h:19:50: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int q_nrows(void) const               { return L.size();};
                                          ˜˜˜˜˜˜ ^˜˜˜˜˜˜˜
./Cholesky.h:20:50: warning: implicit conversion loses integer precision: 'size_type' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32]
  int q_ncols(void) const               { return L[0].size();};
                                          ˜˜˜˜˜˜ ^˜˜˜˜˜˜˜˜˜˜
In file included from diffExpressed_main.cpp:39:
./UpdateRC2MH.h:59:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  oldR.resize(str->Q);
  ˜˜˜˜        ˜˜˜˜˜^
./UpdateRC2MH.h:60:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  newR.resize(str->Q);
  ˜˜˜˜        ˜˜˜˜˜^
./UpdateRC2MH.h:64:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      oldR[p].resize(str->Q);
      ˜˜˜˜ ^
./UpdateRC2MH.h:64:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      oldR[p].resize(str->Q);
      ˜˜˜˜           ˜˜˜˜˜^
./UpdateRC2MH.h:65:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newR[p].resize(str->Q);
      ˜˜˜˜ ^
./UpdateRC2MH.h:65:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newR[p].resize(str->Q);
      ˜˜˜˜           ˜˜˜˜˜^
./UpdateRC2MH.h:68:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          oldR[p][q] = str->r[p][q];
          ˜˜˜˜ ^
./UpdateRC2MH.h:68:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          oldR[p][q] = str->r[p][q];
          ˜˜˜˜    ^
./UpdateRC2MH.h:68:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          oldR[p][q] = str->r[p][q];
                       ˜˜˜    ^
./UpdateRC2MH.h:68:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          oldR[p][q] = str->r[p][q];
                       ˜˜˜       ^
./UpdateRC2MH.h:69:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newR[p][q] = str->r[p][q];
          ˜˜˜˜ ^
./UpdateRC2MH.h:69:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newR[p][q] = str->r[p][q];
          ˜˜˜˜    ^
./UpdateRC2MH.h:69:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newR[p][q] = str->r[p][q];
                       ˜˜˜    ^
./UpdateRC2MH.h:69:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newR[p][q] = str->r[p][q];
                       ˜˜˜       ^
./UpdateRC2MH.h:84:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  vector<double> prob(str->Q);
                 ˜˜˜˜ ˜˜˜˜˜^
./UpdateRC2MH.h:86:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    prob[p] = 1.0 / ((double) str->Q);
    ˜˜˜˜ ^
./UpdateRC2MH.h:88:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  prob.resize(str->Q - 1);
  ˜˜˜˜        ˜˜˜˜˜˜˜^˜˜
./UpdateRC2MH.h:90:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    prob[p] = 1.0 / ((double) (str->Q - 1));
    ˜˜˜˜ ^
./UpdateRC2MH.h:99:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  newR[pp][qq] = oldR[pp][qq] * exp(u) / 
  ˜˜˜˜ ^˜
./UpdateRC2MH.h:99:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  newR[pp][qq] = oldR[pp][qq] * exp(u) / 
  ˜˜˜˜     ^˜
./UpdateRC2MH.h:99:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  newR[pp][qq] = oldR[pp][qq] * exp(u) / 
                 ˜˜˜˜ ^˜
./UpdateRC2MH.h:99:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  newR[pp][qq] = oldR[pp][qq] * exp(u) / 
                 ˜˜˜˜     ^˜
./UpdateRC2MH.h:100:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    (1 - oldR[pp][qq] + oldR[pp][qq] * exp(u));
         ˜˜˜˜ ^˜
./UpdateRC2MH.h:100:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    (1 - oldR[pp][qq] + oldR[pp][qq] * exp(u));
         ˜˜˜˜     ^˜
./UpdateRC2MH.h:100:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    (1 - oldR[pp][qq] + oldR[pp][qq] * exp(u));
                        ˜˜˜˜ ^˜
./UpdateRC2MH.h:100:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    (1 - oldR[pp][qq] + oldR[pp][qq] * exp(u));
                        ˜˜˜˜     ^˜
./UpdateRC2MH.h:101:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  newR[qq][pp] = newR[pp][qq];
  ˜˜˜˜ ^˜
./UpdateRC2MH.h:101:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  newR[qq][pp] = newR[pp][qq];
  ˜˜˜˜     ^˜
./UpdateRC2MH.h:101:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  newR[qq][pp] = newR[pp][qq];
                 ˜˜˜˜ ^˜
./UpdateRC2MH.h:101:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  newR[qq][pp] = newR[pp][qq];
                 ˜˜˜˜     ^˜
./UpdateRC2MH.h:116:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double y = oldR[pp][qq];
             ˜˜˜˜ ^˜
./UpdateRC2MH.h:116:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double y = oldR[pp][qq];
             ˜˜˜˜     ^˜
./UpdateRC2MH.h:136:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      isNeg += (newR[p][q] < 0.0);
                ˜˜˜˜ ^
./UpdateRC2MH.h:136:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      isNeg += (newR[p][q] < 0.0);
                ˜˜˜˜    ^
./UpdateRC2MH.h:156:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      varInv.resize(str->Q);
      ˜˜˜˜˜˜        ˜˜˜˜˜^
./UpdateRC2MH.h:158:43: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (p = 0; p < str->Q; p++) varInv[p].resize(str->Q);
                                   ˜˜˜˜˜˜ ^
./UpdateRC2MH.h:158:58: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      for (p = 0; p < str->Q; p++) varInv[p].resize(str->Q);
                                   ˜˜˜˜˜˜           ˜˜˜˜˜^
./UpdateRC2MH.h:162:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] = 1;
            ˜˜˜˜˜˜ ^
./UpdateRC2MH.h:162:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] = 1;
            ˜˜˜˜˜˜    ^
./UpdateRC2MH.h:163:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= newR[p][q];
                        ˜˜˜˜˜˜ ^
./UpdateRC2MH.h:163:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= newR[p][q];
                        ˜˜˜˜˜˜    ^
./UpdateRC2MH.h:163:39: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= newR[p][q];
                                        ˜˜˜˜ ^
./UpdateRC2MH.h:163:42: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= newR[p][q];
                                        ˜˜˜˜    ^
./UpdateRC2MH.h:164:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
            ˜˜˜˜˜˜ ^
./UpdateRC2MH.h:164:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
            ˜˜˜˜˜˜    ^
./UpdateRC2MH.h:164:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                                 ˜˜˜        ^
./UpdateRC2MH.h:164:54: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                                                 ˜˜˜        ^
./UpdateRC2MH.h:165:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
            ˜˜˜˜˜˜ ^
./UpdateRC2MH.h:165:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
            ˜˜˜˜˜˜    ^
./UpdateRC2MH.h:165:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                       ˜˜˜    ^
./UpdateRC2MH.h:165:61: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                       ˜˜˜         ^
./UpdateRC2MH.h:165:64: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                       ˜˜˜            ^
./UpdateRC2MH.h:165:77: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                            ˜˜˜    ^
./UpdateRC2MH.h:165:98: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                                            ˜˜˜         ^
./UpdateRC2MH.h:165:101: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                                            ˜˜˜            ^
./UpdateRC2MH.h:167:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
            ˜˜˜˜˜˜ ^
./UpdateRC2MH.h:167:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
            ˜˜˜˜˜˜    ^
./UpdateRC2MH.h:167:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
                           ˜˜˜˜˜˜ ^
./UpdateRC2MH.h:167:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
                           ˜˜˜˜˜˜    ^
./UpdateRC2MH.h:172:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      vector<double> Delta(str->Q);
                     ˜˜˜˜˜ ˜˜˜˜˜^
./UpdateRC2MH.h:174:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Delta[q] = str->Delta[q][g];
        ˜˜˜˜˜ ^
./UpdateRC2MH.h:174:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Delta[q] = str->Delta[q][g];
                   ˜˜˜        ^
./UpdateRC2MH.h:174:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Delta[q] = str->Delta[q][g];
                   ˜˜˜           ^
./UpdateRC2MH.h:202:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      varInv.resize(str->Q);
      ˜˜˜˜˜˜        ˜˜˜˜˜^
./UpdateRC2MH.h:205:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        varInv[p].resize(str->Q);
        ˜˜˜˜˜˜ ^
./UpdateRC2MH.h:205:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        varInv[p].resize(str->Q);
        ˜˜˜˜˜˜           ˜˜˜˜˜^
./UpdateRC2MH.h:209:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] = 1;
            ˜˜˜˜˜˜ ^
./UpdateRC2MH.h:209:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] = 1;
            ˜˜˜˜˜˜    ^
./UpdateRC2MH.h:210:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= oldR[p][q];
                        ˜˜˜˜˜˜ ^
./UpdateRC2MH.h:210:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= oldR[p][q];
                        ˜˜˜˜˜˜    ^
./UpdateRC2MH.h:210:39: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= oldR[p][q];
                                        ˜˜˜˜ ^
./UpdateRC2MH.h:210:42: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= oldR[p][q];
                                        ˜˜˜˜    ^
./UpdateRC2MH.h:211:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
            ˜˜˜˜˜˜ ^
./UpdateRC2MH.h:211:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
            ˜˜˜˜˜˜    ^
./UpdateRC2MH.h:211:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                                 ˜˜˜        ^
./UpdateRC2MH.h:211:54: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                                                 ˜˜˜        ^
./UpdateRC2MH.h:212:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
            ˜˜˜˜˜˜ ^
./UpdateRC2MH.h:212:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
            ˜˜˜˜˜˜    ^
./UpdateRC2MH.h:212:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                       ˜˜˜    ^
./UpdateRC2MH.h:212:61: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                       ˜˜˜         ^
./UpdateRC2MH.h:212:64: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                       ˜˜˜            ^
./UpdateRC2MH.h:212:77: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                            ˜˜˜    ^
./UpdateRC2MH.h:212:98: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                                            ˜˜˜         ^
./UpdateRC2MH.h:212:101: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                                            ˜˜˜            ^
./UpdateRC2MH.h:214:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
            ˜˜˜˜˜˜ ^
./UpdateRC2MH.h:214:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
            ˜˜˜˜˜˜    ^
./UpdateRC2MH.h:214:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
                           ˜˜˜˜˜˜ ^
./UpdateRC2MH.h:214:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
                           ˜˜˜˜˜˜    ^
./UpdateRC2MH.h:219:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      vector<double> Delta(str->Q);
                     ˜˜˜˜˜ ˜˜˜˜˜^
./UpdateRC2MH.h:221:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Delta[q] = str->Delta[q][g];
        ˜˜˜˜˜ ^
./UpdateRC2MH.h:221:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Delta[q] = str->Delta[q][g];
                   ˜˜˜        ^
./UpdateRC2MH.h:221:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        Delta[q] = str->Delta[q][g];
                   ˜˜˜           ^
./UpdateRC2MH.h:243:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          str->r[p][q] = newR[p][q];
          ˜˜˜    ^
./UpdateRC2MH.h:243:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          str->r[p][q] = newR[p][q];
          ˜˜˜       ^
./UpdateRC2MH.h:243:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          str->r[p][q] = newR[p][q];
                         ˜˜˜˜ ^
./UpdateRC2MH.h:243:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          str->r[p][q] = newR[p][q];
                         ˜˜˜˜    ^
./UpdateRC2MH.h:250:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          str->r[p][q] = oldR[p][q];
          ˜˜˜    ^
./UpdateRC2MH.h:250:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          str->r[p][q] = oldR[p][q];
          ˜˜˜       ^
./UpdateRC2MH.h:250:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          str->r[p][q] = oldR[p][q];
                         ˜˜˜˜ ^
./UpdateRC2MH.h:250:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          str->r[p][q] = oldR[p][q];
                         ˜˜˜˜    ^
./UpdateRC2MH.h:261:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->r[p][q] = newR[p][q];
              ˜˜˜    ^
./UpdateRC2MH.h:261:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->r[p][q] = newR[p][q];
              ˜˜˜       ^
./UpdateRC2MH.h:261:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->r[p][q] = newR[p][q];
                             ˜˜˜˜ ^
./UpdateRC2MH.h:261:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->r[p][q] = newR[p][q];
                             ˜˜˜˜    ^
In file included from diffExpressed_main.cpp:40:
./UpdateRhoGamma2MH.h:60:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  oldRho.resize(str->Q);
  ˜˜˜˜˜˜        ˜˜˜˜˜^
./UpdateRhoGamma2MH.h:61:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  newRho.resize(str->Q);
  ˜˜˜˜˜˜        ˜˜˜˜˜^
./UpdateRhoGamma2MH.h:65:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      oldRho[p].resize(str->Q);
      ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:65:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      oldRho[p].resize(str->Q);
      ˜˜˜˜˜˜           ˜˜˜˜˜^
./UpdateRhoGamma2MH.h:66:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newRho[p].resize(str->Q);
      ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:66:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newRho[p].resize(str->Q);
      ˜˜˜˜˜˜           ˜˜˜˜˜^
./UpdateRhoGamma2MH.h:69:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          oldRho[p][q] = str->rho[p][q];
          ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:69:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          oldRho[p][q] = str->rho[p][q];
          ˜˜˜˜˜˜    ^
./UpdateRhoGamma2MH.h:69:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          oldRho[p][q] = str->rho[p][q];
                         ˜˜˜      ^
./UpdateRhoGamma2MH.h:69:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          oldRho[p][q] = str->rho[p][q];
                         ˜˜˜         ^
./UpdateRhoGamma2MH.h:70:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newRho[p][q] = str->rho[p][q];
          ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:70:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newRho[p][q] = str->rho[p][q];
          ˜˜˜˜˜˜    ^
./UpdateRhoGamma2MH.h:70:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newRho[p][q] = str->rho[p][q];
                         ˜˜˜      ^
./UpdateRhoGamma2MH.h:70:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newRho[p][q] = str->rho[p][q];
                         ˜˜˜         ^
./UpdateRhoGamma2MH.h:81:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  vector<double> prob(str->Q);
                 ˜˜˜˜ ˜˜˜˜˜^
./UpdateRhoGamma2MH.h:83:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    prob[p] = 1.0 / ((double) str->Q);
    ˜˜˜˜ ^
./UpdateRhoGamma2MH.h:85:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  prob.resize(str->Q - 1);
  ˜˜˜˜        ˜˜˜˜˜˜˜^˜˜
./UpdateRhoGamma2MH.h:87:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    prob[p] = 1.0 / ((double) (str->Q - 1));
    ˜˜˜˜ ^
./UpdateRhoGamma2MH.h:96:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  newRho[pp][qq] = oldRho[pp][qq] * exp(u) / 
  ˜˜˜˜˜˜ ^˜
./UpdateRhoGamma2MH.h:96:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  newRho[pp][qq] = oldRho[pp][qq] * exp(u) / 
  ˜˜˜˜˜˜     ^˜
./UpdateRhoGamma2MH.h:96:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  newRho[pp][qq] = oldRho[pp][qq] * exp(u) / 
                   ˜˜˜˜˜˜ ^˜
./UpdateRhoGamma2MH.h:96:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  newRho[pp][qq] = oldRho[pp][qq] * exp(u) / 
                   ˜˜˜˜˜˜     ^˜
./UpdateRhoGamma2MH.h:97:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    (1 - oldRho[pp][qq] + oldRho[pp][qq] * exp(u));
         ˜˜˜˜˜˜ ^˜
./UpdateRhoGamma2MH.h:97:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    (1 - oldRho[pp][qq] + oldRho[pp][qq] * exp(u));
         ˜˜˜˜˜˜     ^˜
./UpdateRhoGamma2MH.h:97:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    (1 - oldRho[pp][qq] + oldRho[pp][qq] * exp(u));
                          ˜˜˜˜˜˜ ^˜
./UpdateRhoGamma2MH.h:97:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    (1 - oldRho[pp][qq] + oldRho[pp][qq] * exp(u));
                          ˜˜˜˜˜˜     ^˜
./UpdateRhoGamma2MH.h:98:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  newRho[qq][pp] = newRho[pp][qq];
  ˜˜˜˜˜˜ ^˜
./UpdateRhoGamma2MH.h:98:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  newRho[qq][pp] = newRho[pp][qq];
  ˜˜˜˜˜˜     ^˜
./UpdateRhoGamma2MH.h:98:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  newRho[qq][pp] = newRho[pp][qq];
                   ˜˜˜˜˜˜ ^˜
./UpdateRhoGamma2MH.h:98:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  newRho[qq][pp] = newRho[pp][qq];
                   ˜˜˜˜˜˜     ^˜
./UpdateRhoGamma2MH.h:112:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double y = oldRho[pp][qq];
             ˜˜˜˜˜˜ ^˜
./UpdateRhoGamma2MH.h:112:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  double y = oldRho[pp][qq];
             ˜˜˜˜˜˜     ^˜
./UpdateRhoGamma2MH.h:132:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      isNeg += (newRho[p][q] < 0.0);
                ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:132:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      isNeg += (newRho[p][q] < 0.0);
                ˜˜˜˜˜˜    ^
./UpdateRhoGamma2MH.h:151:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      varInv.resize(str->Q);
      ˜˜˜˜˜˜        ˜˜˜˜˜^
./UpdateRhoGamma2MH.h:154:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        varInv[p].resize(str->Q);
        ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:154:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        varInv[p].resize(str->Q);
        ˜˜˜˜˜˜           ˜˜˜˜˜^
./UpdateRhoGamma2MH.h:158:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] = 1;
            ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:158:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] = 1;
            ˜˜˜˜˜˜    ^
./UpdateRhoGamma2MH.h:159:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= newRho[p][q];
                        ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:159:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= newRho[p][q];
                        ˜˜˜˜˜˜    ^
./UpdateRhoGamma2MH.h:159:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= newRho[p][q];
                                        ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:159:44: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= newRho[p][q];
                                        ˜˜˜˜˜˜    ^
./UpdateRhoGamma2MH.h:160:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2Rho[p] * str->tau2Rho[q]);
            ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:160:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2Rho[p] * str->tau2Rho[q]);
            ˜˜˜˜˜˜    ^
./UpdateRhoGamma2MH.h:160:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2Rho[p] * str->tau2Rho[q]);
                                 ˜˜˜          ^
./UpdateRhoGamma2MH.h:160:58: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2Rho[p] * str->tau2Rho[q]);
                                                   ˜˜˜          ^
./UpdateRhoGamma2MH.h:161:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
            ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:161:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
            ˜˜˜˜˜˜    ^
./UpdateRhoGamma2MH.h:161:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                       ˜˜˜    ^
./UpdateRhoGamma2MH.h:161:61: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                       ˜˜˜         ^
./UpdateRhoGamma2MH.h:161:64: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                       ˜˜˜            ^
./UpdateRhoGamma2MH.h:161:77: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                                            ˜˜˜    ^
./UpdateRhoGamma2MH.h:161:98: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                                                            ˜˜˜         ^
./UpdateRhoGamma2MH.h:161:101: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                                                            ˜˜˜            ^
./UpdateRhoGamma2MH.h:163:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
            ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:163:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
            ˜˜˜˜˜˜    ^
./UpdateRhoGamma2MH.h:163:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
                           ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:163:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
                           ˜˜˜˜˜˜    ^
./UpdateRhoGamma2MH.h:168:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      vector<double> nu(str->Q);
                     ˜˜ ˜˜˜˜˜^
./UpdateRhoGamma2MH.h:170:5: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nu[q] = str->nu[q][g];
        ˜˜ ^
./UpdateRhoGamma2MH.h:170:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nu[q] = str->nu[q][g];
                ˜˜˜     ^
./UpdateRhoGamma2MH.h:170:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nu[q] = str->nu[q][g];
                ˜˜˜        ^
./UpdateRhoGamma2MH.h:189:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      varInv.resize(str->Q);
      ˜˜˜˜˜˜        ˜˜˜˜˜^
./UpdateRhoGamma2MH.h:192:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        varInv[p].resize(str->Q);
        ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:192:24: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        varInv[p].resize(str->Q);
        ˜˜˜˜˜˜           ˜˜˜˜˜^
./UpdateRhoGamma2MH.h:196:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] = 1;
            ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:196:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] = 1;
            ˜˜˜˜˜˜    ^
./UpdateRhoGamma2MH.h:197:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= oldRho[p][q];
                        ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:197:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= oldRho[p][q];
                        ˜˜˜˜˜˜    ^
./UpdateRhoGamma2MH.h:197:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= oldRho[p][q];
                                        ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:197:44: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            if (p != q) varInv[p][q] *= oldRho[p][q];
                                        ˜˜˜˜˜˜    ^
./UpdateRhoGamma2MH.h:198:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2Rho[p] * str->tau2Rho[q]);
            ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:198:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2Rho[p] * str->tau2Rho[q]);
            ˜˜˜˜˜˜    ^
./UpdateRhoGamma2MH.h:198:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2Rho[p] * str->tau2Rho[q]);
                                 ˜˜˜          ^
./UpdateRhoGamma2MH.h:198:58: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= sqrt(str->tau2Rho[p] * str->tau2Rho[q]);
                                                   ˜˜˜          ^
./UpdateRhoGamma2MH.h:199:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
            ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:199:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
            ˜˜˜˜˜˜    ^
./UpdateRhoGamma2MH.h:199:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                       ˜˜˜    ^
./UpdateRhoGamma2MH.h:199:61: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                       ˜˜˜         ^
./UpdateRhoGamma2MH.h:199:64: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                       ˜˜˜            ^
./UpdateRhoGamma2MH.h:199:77: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                                            ˜˜˜    ^
./UpdateRhoGamma2MH.h:199:98: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                                                            ˜˜˜         ^
./UpdateRhoGamma2MH.h:199:101: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                                                            ˜˜˜            ^
./UpdateRhoGamma2MH.h:201:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
            ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:201:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
            ˜˜˜˜˜˜    ^
./UpdateRhoGamma2MH.h:201:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
                           ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:201:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            varInv[q][p] = varInv[p][q];
                           ˜˜˜˜˜˜    ^
./UpdateRhoGamma2MH.h:206:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      vector<double> nu(str->Q);
                     ˜˜ ˜˜˜˜˜^
./UpdateRhoGamma2MH.h:208:5: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nu[q] = str->nu[q][g];
        ˜˜ ^
./UpdateRhoGamma2MH.h:208:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nu[q] = str->nu[q][g];
                ˜˜˜     ^
./UpdateRhoGamma2MH.h:208:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nu[q] = str->nu[q][g];
                ˜˜˜        ^
./UpdateRhoGamma2MH.h:225:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      str->rho[p][q] = newRho[p][q];
      ˜˜˜      ^
./UpdateRhoGamma2MH.h:225:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      str->rho[p][q] = newRho[p][q];
      ˜˜˜         ^
./UpdateRhoGamma2MH.h:225:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      str->rho[p][q] = newRho[p][q];
                       ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:225:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      str->rho[p][q] = newRho[p][q];
                       ˜˜˜˜˜˜    ^
./UpdateRhoGamma2MH.h:232:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      str->rho[p][q] = oldRho[p][q];
      ˜˜˜      ^
./UpdateRhoGamma2MH.h:232:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      str->rho[p][q] = oldRho[p][q];
      ˜˜˜         ^
./UpdateRhoGamma2MH.h:232:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      str->rho[p][q] = oldRho[p][q];
                       ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:232:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      str->rho[p][q] = oldRho[p][q];
                       ˜˜˜˜˜˜    ^
./UpdateRhoGamma2MH.h:243:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          str->rho[p][q] = newRho[p][q];
          ˜˜˜      ^
./UpdateRhoGamma2MH.h:243:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          str->rho[p][q] = newRho[p][q];
          ˜˜˜         ^
./UpdateRhoGamma2MH.h:243:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          str->rho[p][q] = newRho[p][q];
                           ˜˜˜˜˜˜ ^
./UpdateRhoGamma2MH.h:243:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          str->rho[p][q] = newRho[p][q];
                           ˜˜˜˜˜˜    ^
In file included from diffExpressed_main.cpp:41:
In file included from ./UpdateDeltaMH.h:5:
./PotentialDeltag.h:61:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          if (str->delta[q][g] == 1)
              ˜˜˜        ^
./PotentialDeltag.h:61:22: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          if (str->delta[q][g] == 1)
              ˜˜˜           ^
./PotentialDeltag.h:62:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            pot += - log(str->xi[q]);
                         ˜˜˜     ^
./PotentialDeltag.h:64:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            pot += - log(1.0 - str->xi[q]);
                               ˜˜˜     ^
./PotentialDeltag.h:69:25: warning: implicit conversion changes signedness: 'const int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      if (str->delta[0][g] == 1)
          ˜˜˜           ^
In file included from diffExpressed_main.cpp:41:
./UpdateDeltaMH.h:48:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        delete term[i];
               ˜˜˜˜ ^
./UpdateDeltaMH.h:60:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    delete model[i];
           ˜˜˜˜˜ ^
./UpdateDeltaMH.h:85:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nOn += str->delta[q][g];
               ˜˜˜        ^
./UpdateDeltaMH.h:85:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        nOn += str->delta[q][g];
               ˜˜˜           ^
./UpdateDeltaMH.h:91:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          int oldDelta = str->delta[0][g];
                         ˜˜˜           ^
./UpdateDeltaMH.h:99:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          var.resize(str->Q);
          ˜˜˜        ˜˜˜˜˜^
./UpdateDeltaMH.h:102:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            var[p].resize(str->Q);
            ˜˜˜ ^
./UpdateDeltaMH.h:102:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            var[p].resize(str->Q);
            ˜˜˜           ˜˜˜˜˜^
./UpdateDeltaMH.h:105:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] = str->c2 * str->tau2R[p];
              ˜˜˜ ^
./UpdateDeltaMH.h:105:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] = str->c2 * str->tau2R[p];
              ˜˜˜    ^
./UpdateDeltaMH.h:105:41: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] = str->c2 * str->tau2R[p];
                                    ˜˜˜        ^
./UpdateDeltaMH.h:106:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
              ˜˜˜ ^
./UpdateDeltaMH.h:106:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
              ˜˜˜    ^
./UpdateDeltaMH.h:106:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
                               ˜˜˜    ^
./UpdateDeltaMH.h:106:53: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
                                               ˜˜˜         ^
./UpdateDeltaMH.h:106:56: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
                                               ˜˜˜            ^
./UpdateDeltaMH.h:112:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] = str->c2;
                ˜˜˜ ^
./UpdateDeltaMH.h:112:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] = str->c2;
                ˜˜˜    ^
./UpdateDeltaMH.h:113:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->r[p][q];
                ˜˜˜ ^
./UpdateDeltaMH.h:113:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->r[p][q];
                ˜˜˜    ^
./UpdateDeltaMH.h:113:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->r[p][q];
                             ˜˜˜    ^
./UpdateDeltaMH.h:113:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->r[p][q];
                             ˜˜˜       ^
./UpdateDeltaMH.h:114:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                ˜˜˜ ^
./UpdateDeltaMH.h:114:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                ˜˜˜    ^
./UpdateDeltaMH.h:114:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                                  ˜˜˜        ^
./UpdateDeltaMH.h:114:48: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(str->tau2R[p] * str->tau2R[q]);
                                                  ˜˜˜        ^
./UpdateDeltaMH.h:115:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                ˜˜˜ ^
./UpdateDeltaMH.h:115:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                ˜˜˜    ^
./UpdateDeltaMH.h:115:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                        ˜˜˜    ^
./UpdateDeltaMH.h:115:55: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                        ˜˜˜         ^
./UpdateDeltaMH.h:115:58: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                        ˜˜˜            ^
./UpdateDeltaMH.h:115:71: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                             ˜˜˜    ^
./UpdateDeltaMH.h:115:92: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                                             ˜˜˜         ^
./UpdateDeltaMH.h:115:95: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                                             ˜˜˜            ^
./UpdateDeltaMH.h:116:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                ˜˜˜ ^
./UpdateDeltaMH.h:116:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                ˜˜˜    ^
./UpdateDeltaMH.h:116:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                            ˜˜˜ ^
./UpdateDeltaMH.h:116:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                            ˜˜˜    ^
./UpdateDeltaMH.h:123:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vector<double> mean(str->Q);
                         ˜˜˜˜ ˜˜˜˜˜^
./UpdateDeltaMH.h:125:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            mean[p] = 0.0;
            ˜˜˜˜ ^
./UpdateDeltaMH.h:133:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vector<double> mean1(str->Q);
                         ˜˜˜˜˜ ˜˜˜˜˜^
./UpdateDeltaMH.h:135:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            mean1[p] = mean[p];
            ˜˜˜˜˜ ^
./UpdateDeltaMH.h:135:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            mean1[p] = mean[p];
                       ˜˜˜˜ ^
./UpdateDeltaMH.h:140:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              double v0 = str->sigma2[q][g] * str->phi[q][g];
                          ˜˜˜         ^
./UpdateDeltaMH.h:140:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              double v0 = str->sigma2[q][g] * str->phi[q][g];
                          ˜˜˜            ^
./UpdateDeltaMH.h:140:49: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              double v0 = str->sigma2[q][g] * str->phi[q][g];
                                              ˜˜˜      ^
./UpdateDeltaMH.h:140:52: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              double v0 = str->sigma2[q][g] * str->phi[q][g];
                                              ˜˜˜         ^
./UpdateDeltaMH.h:141:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              double v1 = str->sigma2[q][g] / str->phi[q][g];
                          ˜˜˜         ^
./UpdateDeltaMH.h:141:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              double v1 = str->sigma2[q][g] / str->phi[q][g];
                          ˜˜˜            ^
./UpdateDeltaMH.h:141:49: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              double v1 = str->sigma2[q][g] / str->phi[q][g];
                                              ˜˜˜      ^
./UpdateDeltaMH.h:141:52: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              double v1 = str->sigma2[q][g] / str->phi[q][g];
                                              ˜˜˜         ^
./UpdateDeltaMH.h:143:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              for (s = 0; s < str->S[q]; s++)
                              ˜˜˜    ^
./UpdateDeltaMH.h:145:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  double variance = str->psi[q][s] == 0 ? v0 : v1;
                                    ˜˜˜      ^
./UpdateDeltaMH.h:145:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  double variance = str->psi[q][s] == 0 ? v0 : v1;
                                    ˜˜˜         ^
./UpdateDeltaMH.h:146:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  var1[q][q] += 1.0 / variance;
                  ˜˜˜˜ ^
./UpdateDeltaMH.h:146:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  var1[q][q] += 1.0 / variance;
                  ˜˜˜˜    ^
./UpdateDeltaMH.h:147:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  mean1[q] += (2.0 * str->psi[q][s] - 1.0) * (str->x[q][g][s] - str->nu[q][g]) / variance;
                  ˜˜˜˜˜ ^
./UpdateDeltaMH.h:147:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  mean1[q] += (2.0 * str->psi[q][s] - 1.0) * (str->x[q][g][s] - str->nu[q][g]) / variance;
                                     ˜˜˜      ^
./UpdateDeltaMH.h:147:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  mean1[q] += (2.0 * str->psi[q][s] - 1.0) * (str->x[q][g][s] - str->nu[q][g]) / variance;
                                     ˜˜˜         ^
./UpdateDeltaMH.h:147:56: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  mean1[q] += (2.0 * str->psi[q][s] - 1.0) * (str->x[q][g][s] - str->nu[q][g]) / variance;
                                                              ˜˜˜    ^
./UpdateDeltaMH.h:147:59: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  mean1[q] += (2.0 * str->psi[q][s] - 1.0) * (str->x[q][g][s] - str->nu[q][g]) / variance;
                                                              ˜˜˜       ^
./UpdateDeltaMH.h:147:62: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  mean1[q] += (2.0 * str->psi[q][s] - 1.0) * (str->x[q][g][s] - str->nu[q][g]) / variance;
                                                              ˜˜˜          ^
./UpdateDeltaMH.h:147:75: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  mean1[q] += (2.0 * str->psi[q][s] - 1.0) * (str->x[q][g][s] - str->nu[q][g]) / variance;
                                                                                ˜˜˜     ^
./UpdateDeltaMH.h:147:78: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  mean1[q] += (2.0 * str->psi[q][s] - 1.0) * (str->x[q][g][s] - str->nu[q][g]) / variance;
                                                                                ˜˜˜        ^
./UpdateDeltaMH.h:160:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vector<double> newDDelta(str->Q);
                         ˜˜˜˜˜˜˜˜˜ ˜˜˜˜˜^
./UpdateDeltaMH.h:166:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vector<double> oldDDelta(str->Q);
                         ˜˜˜˜˜˜˜˜˜ ˜˜˜˜˜^
./UpdateDeltaMH.h:168:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            oldDDelta[q] = str->Delta[q][g];
            ˜˜˜˜˜˜˜˜˜ ^
./UpdateDeltaMH.h:168:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            oldDDelta[q] = str->Delta[q][g];
                           ˜˜˜        ^
./UpdateDeltaMH.h:168:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            oldDDelta[q] = str->Delta[q][g];
                           ˜˜˜           ^
./UpdateDeltaMH.h:186:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          pot -= model[g]->potential(ran);
                 ˜˜˜˜˜ ^
./UpdateDeltaMH.h:189:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->delta[q][g] = newDelta;
            ˜˜˜        ^
./UpdateDeltaMH.h:189:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->delta[q][g] = newDelta;
            ˜˜˜           ^
./UpdateDeltaMH.h:191:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->Delta[q][g] = newDDelta[q];
            ˜˜˜        ^
./UpdateDeltaMH.h:191:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->Delta[q][g] = newDDelta[q];
            ˜˜˜           ^
./UpdateDeltaMH.h:191:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->Delta[q][g] = newDDelta[q];
                               ˜˜˜˜˜˜˜˜˜ ^
./UpdateDeltaMH.h:193:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          pot += model[g]->potential(ran);
                 ˜˜˜˜˜ ^
./UpdateDeltaMH.h:196:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->delta[q][g] = oldDelta;
            ˜˜˜        ^
./UpdateDeltaMH.h:196:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->delta[q][g] = oldDelta;
            ˜˜˜           ^
./UpdateDeltaMH.h:198:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->Delta[q][g] = oldDDelta[q];
            ˜˜˜        ^
./UpdateDeltaMH.h:198:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->Delta[q][g] = oldDDelta[q];
            ˜˜˜           ^
./UpdateDeltaMH.h:198:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->Delta[q][g] = oldDDelta[q];
                               ˜˜˜˜˜˜˜˜˜ ^
./UpdateDeltaMH.h:205:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                str->delta[q][g] = newDelta;
                ˜˜˜        ^
./UpdateDeltaMH.h:205:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                str->delta[q][g] = newDelta;
                ˜˜˜           ^
./UpdateDeltaMH.h:207:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                str->Delta[q][g] = newDDelta[q];
                ˜˜˜        ^
./UpdateDeltaMH.h:207:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                str->Delta[q][g] = newDDelta[q];
                ˜˜˜           ^
./UpdateDeltaMH.h:207:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                str->Delta[q][g] = newDDelta[q];
                                   ˜˜˜˜˜˜˜˜˜ ^
./UpdateDeltaMH.h:216:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          int oldDelta = str->delta[q][g];
                         ˜˜˜        ^
./UpdateDeltaMH.h:216:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          int oldDelta = str->delta[q][g];
                         ˜˜˜           ^
./UpdateDeltaMH.h:224:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          var.resize(str->Q);
          ˜˜˜        ˜˜˜˜˜^
./UpdateDeltaMH.h:227:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            var[pp].resize(str->Q);
            ˜˜˜ ^˜
./UpdateDeltaMH.h:227:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            var[pp].resize(str->Q);
            ˜˜˜            ˜˜˜˜˜^
./UpdateDeltaMH.h:230:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[pp][pp] = str->c2 * str->tau2R[pp];
              ˜˜˜ ^˜
./UpdateDeltaMH.h:230:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[pp][pp] = str->c2 * str->tau2R[pp];
              ˜˜˜     ^˜
./UpdateDeltaMH.h:230:43: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[pp][pp] = str->c2 * str->tau2R[pp];
                                      ˜˜˜        ^˜
./UpdateDeltaMH.h:231:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[pp][pp] *= exp(str->b[pp] * log(str->sigma2[pp][g]));
              ˜˜˜ ^˜
./UpdateDeltaMH.h:231:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[pp][pp] *= exp(str->b[pp] * log(str->sigma2[pp][g]));
              ˜˜˜     ^˜
./UpdateDeltaMH.h:231:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[pp][pp] *= exp(str->b[pp] * log(str->sigma2[pp][g]));
                                 ˜˜˜    ^˜
./UpdateDeltaMH.h:231:56: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[pp][pp] *= exp(str->b[pp] * log(str->sigma2[pp][g]));
                                                  ˜˜˜         ^˜
./UpdateDeltaMH.h:231:60: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[pp][pp] *= exp(str->b[pp] * log(str->sigma2[pp][g]));
                                                  ˜˜˜             ^
./UpdateDeltaMH.h:237:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[pp][qq] = str->c2;
                ˜˜˜ ^˜
./UpdateDeltaMH.h:237:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[pp][qq] = str->c2;
                ˜˜˜     ^˜
./UpdateDeltaMH.h:238:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[pp][qq] *= str->r[pp][qq];
                ˜˜˜ ^˜
./UpdateDeltaMH.h:238:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[pp][qq] *= str->r[pp][qq];
                ˜˜˜     ^˜
./UpdateDeltaMH.h:238:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[pp][qq] *= str->r[pp][qq];
                               ˜˜˜    ^˜
./UpdateDeltaMH.h:238:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[pp][qq] *= str->r[pp][qq];
                               ˜˜˜        ^˜
./UpdateDeltaMH.h:239:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[pp][qq] *= sqrt(str->tau2R[pp] * str->tau2R[qq]);
                ˜˜˜ ^˜
./UpdateDeltaMH.h:239:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[pp][qq] *= sqrt(str->tau2R[pp] * str->tau2R[qq]);
                ˜˜˜     ^˜
./UpdateDeltaMH.h:239:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[pp][qq] *= sqrt(str->tau2R[pp] * str->tau2R[qq]);
                                    ˜˜˜        ^˜
./UpdateDeltaMH.h:239:51: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[pp][qq] *= sqrt(str->tau2R[pp] * str->tau2R[qq]);
                                                     ˜˜˜        ^˜
./UpdateDeltaMH.h:240:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[pp][qq] *= exp(0.5 * (str->b[qq] * log(str->sigma2[qq][g]) + str->b[pp] * log(str->sigma2[pp][g])));
                ˜˜˜ ^˜
./UpdateDeltaMH.h:240:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[pp][qq] *= exp(0.5 * (str->b[qq] * log(str->sigma2[qq][g]) + str->b[pp] * log(str->sigma2[pp][g])));
                ˜˜˜     ^˜
./UpdateDeltaMH.h:240:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[pp][qq] *= exp(0.5 * (str->b[qq] * log(str->sigma2[qq][g]) + str->b[pp] * log(str->sigma2[pp][g])));
                                          ˜˜˜    ^˜
./UpdateDeltaMH.h:240:58: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[pp][qq] *= exp(0.5 * (str->b[qq] * log(str->sigma2[qq][g]) + str->b[pp] * log(str->sigma2[pp][g])));
                                                           ˜˜˜         ^˜
./UpdateDeltaMH.h:240:62: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[pp][qq] *= exp(0.5 * (str->b[qq] * log(str->sigma2[qq][g]) + str->b[pp] * log(str->sigma2[pp][g])));
                                                           ˜˜˜             ^
./UpdateDeltaMH.h:240:75: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[pp][qq] *= exp(0.5 * (str->b[qq] * log(str->sigma2[qq][g]) + str->b[pp] * log(str->sigma2[pp][g])));
                                                                                 ˜˜˜    ^˜
./UpdateDeltaMH.h:240:97: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[pp][qq] *= exp(0.5 * (str->b[qq] * log(str->sigma2[qq][g]) + str->b[pp] * log(str->sigma2[pp][g])));
                                                                                                  ˜˜˜         ^˜
./UpdateDeltaMH.h:240:101: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[pp][qq] *= exp(0.5 * (str->b[qq] * log(str->sigma2[qq][g]) + str->b[pp] * log(str->sigma2[pp][g])));
                                                                                                  ˜˜˜             ^
./UpdateDeltaMH.h:241:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[qq][pp] = var[pp][qq];
                ˜˜˜ ^˜
./UpdateDeltaMH.h:241:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[qq][pp] = var[pp][qq];
                ˜˜˜     ^˜
./UpdateDeltaMH.h:241:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[qq][pp] = var[pp][qq];
                              ˜˜˜ ^˜
./UpdateDeltaMH.h:241:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[qq][pp] = var[pp][qq];
                              ˜˜˜     ^˜
./UpdateDeltaMH.h:248:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vector<double> mean(str->Q);
                         ˜˜˜˜ ˜˜˜˜˜^
./UpdateDeltaMH.h:250:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            mean[pp] = 0.0;
            ˜˜˜˜ ^˜
./UpdateDeltaMH.h:258:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vector<double> mean0(str->Q);
                         ˜˜˜˜˜ ˜˜˜˜˜^
./UpdateDeltaMH.h:260:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            mean0[pp] = mean[pp];
            ˜˜˜˜˜ ^˜
./UpdateDeltaMH.h:260:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            mean0[pp] = mean[pp];
                        ˜˜˜˜ ^˜
./UpdateDeltaMH.h:265:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              if (qq != q && str->delta[qq][g] == 1)
                             ˜˜˜        ^˜
./UpdateDeltaMH.h:265:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              if (qq != q && str->delta[qq][g] == 1)
                             ˜˜˜            ^
./UpdateDeltaMH.h:267:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  double v0 = str->sigma2[qq][g] * str->phi[qq][g];
                              ˜˜˜         ^˜
./UpdateDeltaMH.h:267:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  double v0 = str->sigma2[qq][g] * str->phi[qq][g];
                              ˜˜˜             ^
./UpdateDeltaMH.h:267:47: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  double v0 = str->sigma2[qq][g] * str->phi[qq][g];
                                                   ˜˜˜      ^˜
./UpdateDeltaMH.h:267:51: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  double v0 = str->sigma2[qq][g] * str->phi[qq][g];
                                                   ˜˜˜          ^
./UpdateDeltaMH.h:268:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  double v1 = str->sigma2[qq][g] / str->phi[qq][g];
                              ˜˜˜         ^˜
./UpdateDeltaMH.h:268:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  double v1 = str->sigma2[qq][g] / str->phi[qq][g];
                              ˜˜˜             ^
./UpdateDeltaMH.h:268:47: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  double v1 = str->sigma2[qq][g] / str->phi[qq][g];
                                                   ˜˜˜      ^˜
./UpdateDeltaMH.h:268:51: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  double v1 = str->sigma2[qq][g] / str->phi[qq][g];
                                                   ˜˜˜          ^
./UpdateDeltaMH.h:270:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  for (s = 0; s < str->S[qq]; s++)
                                  ˜˜˜    ^˜
./UpdateDeltaMH.h:272:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      double variance = str->psi[qq][s] == 0 ? v0 : v1;
                                        ˜˜˜      ^˜
./UpdateDeltaMH.h:272:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      double variance = str->psi[qq][s] == 0 ? v0 : v1;
                                        ˜˜˜          ^
./UpdateDeltaMH.h:273:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      var0[qq][qq] += 1.0 / variance;
                      ˜˜˜˜ ^˜
./UpdateDeltaMH.h:273:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      var0[qq][qq] += 1.0 / variance;
                      ˜˜˜˜     ^˜
./UpdateDeltaMH.h:274:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      mean0[qq] += (2.0 * str->psi[qq][s] - 1.0) * (str->x[qq][g][s] - str->nu[qq][g]) / variance;
                      ˜˜˜˜˜ ^˜
./UpdateDeltaMH.h:274:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      mean0[qq] += (2.0 * str->psi[qq][s] - 1.0) * (str->x[qq][g][s] - str->nu[qq][g]) / variance;
                                          ˜˜˜      ^˜
./UpdateDeltaMH.h:274:42: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      mean0[qq] += (2.0 * str->psi[qq][s] - 1.0) * (str->x[qq][g][s] - str->nu[qq][g]) / variance;
                                          ˜˜˜          ^
./UpdateDeltaMH.h:274:62: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      mean0[qq] += (2.0 * str->psi[qq][s] - 1.0) * (str->x[qq][g][s] - str->nu[qq][g]) / variance;
                                                                    ˜˜˜    ^˜
./UpdateDeltaMH.h:274:66: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      mean0[qq] += (2.0 * str->psi[qq][s] - 1.0) * (str->x[qq][g][s] - str->nu[qq][g]) / variance;
                                                                    ˜˜˜        ^
./UpdateDeltaMH.h:274:69: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      mean0[qq] += (2.0 * str->psi[qq][s] - 1.0) * (str->x[qq][g][s] - str->nu[qq][g]) / variance;
                                                                    ˜˜˜           ^
./UpdateDeltaMH.h:274:82: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      mean0[qq] += (2.0 * str->psi[qq][s] - 1.0) * (str->x[qq][g][s] - str->nu[qq][g]) / variance;
                                                                                       ˜˜˜     ^˜
./UpdateDeltaMH.h:274:86: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      mean0[qq] += (2.0 * str->psi[qq][s] - 1.0) * (str->x[qq][g][s] - str->nu[qq][g]) / variance;
                                                                                       ˜˜˜         ^
./UpdateDeltaMH.h:288:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double v0 = str->sigma2[q][g] * str->phi[q][g];
                      ˜˜˜         ^
./UpdateDeltaMH.h:288:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double v0 = str->sigma2[q][g] * str->phi[q][g];
                      ˜˜˜            ^
./UpdateDeltaMH.h:288:45: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double v0 = str->sigma2[q][g] * str->phi[q][g];
                                          ˜˜˜      ^
./UpdateDeltaMH.h:288:48: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double v0 = str->sigma2[q][g] * str->phi[q][g];
                                          ˜˜˜         ^
./UpdateDeltaMH.h:289:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double v1 = str->sigma2[q][g] / str->phi[q][g];
                      ˜˜˜         ^
./UpdateDeltaMH.h:289:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double v1 = str->sigma2[q][g] / str->phi[q][g];
                      ˜˜˜            ^
./UpdateDeltaMH.h:289:45: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double v1 = str->sigma2[q][g] / str->phi[q][g];
                                          ˜˜˜      ^
./UpdateDeltaMH.h:289:48: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          double v1 = str->sigma2[q][g] / str->phi[q][g];
                                          ˜˜˜         ^
./UpdateDeltaMH.h:291:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          for (s = 0; s < str->S[q]; s++)
                          ˜˜˜    ^
./UpdateDeltaMH.h:293:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              double variance = str->psi[q][s] == 0 ? v0 : v1;
                                ˜˜˜      ^
./UpdateDeltaMH.h:293:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              double variance = str->psi[q][s] == 0 ? v0 : v1;
                                ˜˜˜         ^
./UpdateDeltaMH.h:294:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var0[q][q] += 1.0 / variance;
              ˜˜˜˜ ^
./UpdateDeltaMH.h:294:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var0[q][q] += 1.0 / variance;
              ˜˜˜˜    ^
./UpdateDeltaMH.h:295:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              mean0[q] += (2.0 * str->psi[q][s] - 1.0) * (str->x[q][g][s] - str->nu[q][g]) / variance;
              ˜˜˜˜˜ ^
./UpdateDeltaMH.h:295:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              mean0[q] += (2.0 * str->psi[q][s] - 1.0) * (str->x[q][g][s] - str->nu[q][g]) / variance;
                                 ˜˜˜      ^
./UpdateDeltaMH.h:295:39: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              mean0[q] += (2.0 * str->psi[q][s] - 1.0) * (str->x[q][g][s] - str->nu[q][g]) / variance;
                                 ˜˜˜         ^
./UpdateDeltaMH.h:295:59: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              mean0[q] += (2.0 * str->psi[q][s] - 1.0) * (str->x[q][g][s] - str->nu[q][g]) / variance;
                                                          ˜˜˜    ^
./UpdateDeltaMH.h:295:62: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              mean0[q] += (2.0 * str->psi[q][s] - 1.0) * (str->x[q][g][s] - str->nu[q][g]) / variance;
                                                          ˜˜˜       ^
./UpdateDeltaMH.h:295:65: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              mean0[q] += (2.0 * str->psi[q][s] - 1.0) * (str->x[q][g][s] - str->nu[q][g]) / variance;
                                                          ˜˜˜          ^
./UpdateDeltaMH.h:295:78: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              mean0[q] += (2.0 * str->psi[q][s] - 1.0) * (str->x[q][g][s] - str->nu[q][g]) / variance;
                                                                            ˜˜˜     ^
./UpdateDeltaMH.h:295:81: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              mean0[q] += (2.0 * str->psi[q][s] - 1.0) * (str->x[q][g][s] - str->nu[q][g]) / variance;
                                                                            ˜˜˜        ^
./UpdateDeltaMH.h:306:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vector<double> newDDelta(str->Q);
                         ˜˜˜˜˜˜˜˜˜ ˜˜˜˜˜^
./UpdateDeltaMH.h:312:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vector<double> oldDDelta(str->Q);
                         ˜˜˜˜˜˜˜˜˜ ˜˜˜˜˜^
./UpdateDeltaMH.h:314:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            oldDDelta[qq] = str->Delta[qq][g];
            ˜˜˜˜˜˜˜˜˜ ^˜
./UpdateDeltaMH.h:314:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            oldDDelta[qq] = str->Delta[qq][g];
                            ˜˜˜        ^˜
./UpdateDeltaMH.h:314:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            oldDDelta[qq] = str->Delta[qq][g];
                            ˜˜˜            ^
./UpdateDeltaMH.h:332:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          pot -= model[g]->potential(ran);
                 ˜˜˜˜˜ ^
./UpdateDeltaMH.h:334:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          str->delta[q][g] = newDelta;
          ˜˜˜        ^
./UpdateDeltaMH.h:334:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          str->delta[q][g] = newDelta;
          ˜˜˜           ^
./UpdateDeltaMH.h:336:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->Delta[qq][g] = newDDelta[qq];
            ˜˜˜        ^˜
./UpdateDeltaMH.h:336:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->Delta[qq][g] = newDDelta[qq];
            ˜˜˜            ^
./UpdateDeltaMH.h:336:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->Delta[qq][g] = newDDelta[qq];
                                ˜˜˜˜˜˜˜˜˜ ^˜
./UpdateDeltaMH.h:338:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          pot += model[g]->potential(ran);
                 ˜˜˜˜˜ ^
./UpdateDeltaMH.h:340:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          str->delta[q][g] = oldDelta;
          ˜˜˜        ^
./UpdateDeltaMH.h:340:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          str->delta[q][g] = oldDelta;
          ˜˜˜           ^
./UpdateDeltaMH.h:342:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->Delta[qq][g] = oldDDelta[qq];
            ˜˜˜        ^˜
./UpdateDeltaMH.h:342:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->Delta[qq][g] = oldDDelta[qq];
            ˜˜˜            ^
./UpdateDeltaMH.h:342:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->Delta[qq][g] = oldDDelta[qq];
                                ˜˜˜˜˜˜˜˜˜ ^˜
./UpdateDeltaMH.h:348:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->delta[q][g] = newDelta;
              ˜˜˜        ^
./UpdateDeltaMH.h:348:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->delta[q][g] = newDelta;
              ˜˜˜           ^
./UpdateDeltaMH.h:350:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                str->Delta[qq][g] = newDDelta[qq];
                ˜˜˜        ^˜
./UpdateDeltaMH.h:350:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                str->Delta[qq][g] = newDDelta[qq];
                ˜˜˜            ^
./UpdateDeltaMH.h:350:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                str->Delta[qq][g] = newDDelta[qq];
                                    ˜˜˜˜˜˜˜˜˜ ^˜
In file included from diffExpressed_main.cpp:42:
./UpdateXiGibbs.h:76:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          if (str->delta[0][g] == 1)
              ˜˜˜           ^
./UpdateXiGibbs.h:100:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->xi[q] = newValue;
            ˜˜˜     ^
./UpdateXiGibbs.h:106:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->xi[q] = oldValue;
            ˜˜˜     ^
./UpdateXiGibbs.h:118:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        str->xi[q] = newValue;
        ˜˜˜     ^
./UpdateXiGibbs.h:143:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              if (str->delta[q][g] == 1)
                  ˜˜˜        ^
./UpdateXiGibbs.h:143:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              if (str->delta[q][g] == 1)
                  ˜˜˜           ^
./UpdateXiGibbs.h:161:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              double oldValue = str->xi[q];
                                ˜˜˜     ^
./UpdateXiGibbs.h:165:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->xi[q] = newValue;
              ˜˜˜     ^
./UpdateXiGibbs.h:170:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->xi[q] = oldValue;
              ˜˜˜     ^
./UpdateXiGibbs.h:180:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          str->xi[q] = newValue;
          ˜˜˜     ^
In file included from diffExpressed_main.cpp:43:
In file included from ./UpdateSigma2MH.h:4:
./UpdateMultiplicativePositive.h:51:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->model[i] = model[i]->copy();
    ˜˜˜˜        ^
./UpdateMultiplicativePositive.h:51:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->model[i] = model[i]->copy();
                     ˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:55:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      this->variable1[i] = variable[i];
      ˜˜˜˜            ^
./UpdateMultiplicativePositive.h:55:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      this->variable1[i] = variable[i];
                           ˜˜˜˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:56:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      this->variable2[i] = NULL;
      ˜˜˜˜            ^
./UpdateMultiplicativePositive.h:78:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      this->variable1[i] = variable[i];
      ˜˜˜˜            ^
./UpdateMultiplicativePositive.h:78:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      this->variable1[i] = variable[i];
                           ˜˜˜˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:79:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      this->variable2[i] = NULL;
      ˜˜˜˜            ^
./UpdateMultiplicativePositive.h:125:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->model[i] = model[i]->copy();
    ˜˜˜˜        ^
./UpdateMultiplicativePositive.h:125:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->model[i] = model[i]->copy();
                     ˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:128:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->variable1[i] = variable1[i];
    ˜˜˜˜            ^
./UpdateMultiplicativePositive.h:128:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->variable1[i] = variable1[i];
                         ˜˜˜˜˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:131:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->variable2[i] = variable2[i];
    ˜˜˜˜            ^
./UpdateMultiplicativePositive.h:131:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->variable2[i] = variable2[i];
                         ˜˜˜˜˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:160:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->variable1[i] = variable1[i];
    ˜˜˜˜            ^
./UpdateMultiplicativePositive.h:160:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->variable1[i] = variable1[i];
                         ˜˜˜˜˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:163:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->variable2[i] = variable2[i];
    ˜˜˜˜            ^
./UpdateMultiplicativePositive.h:163:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    this->variable2[i] = variable2[i];
                         ˜˜˜˜˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:221:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      double valueOld1 = *(variable1[i]);
                           ˜˜˜˜˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:223:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      if (variable2[i] != NULL) valueOld2 = *(variable2[i]);
          ˜˜˜˜˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:223:57: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      if (variable2[i] != NULL) valueOld2 = *(variable2[i]);
                                              ˜˜˜˜˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:228:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      if (variable2[i] == NULL)
          ˜˜˜˜˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:236:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        pot -= model[i]->potential(ran);
               ˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:238:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      *(variable1[i]) = valueNew1;
        ˜˜˜˜˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:239:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      if (variable2[i] != NULL) *(variable2[i]) = valueNew2;
          ˜˜˜˜˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:239:45: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      if (variable2[i] != NULL) *(variable2[i]) = valueNew2;
                                  ˜˜˜˜˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:244:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        pot += model[i]->potential(ran);
               ˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:246:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      *(variable1[i]) = valueOld1;
        ˜˜˜˜˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:247:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      if (variable2[i] != NULL) *(variable2[i]) = valueOld2;
          ˜˜˜˜˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:247:45: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      if (variable2[i] != NULL) *(variable2[i]) = valueOld2;
                                  ˜˜˜˜˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:251:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          *(variable1[i]) = valueNew1;
            ˜˜˜˜˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:252:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          if (variable2[i] != NULL) *(variable2[i]) = valueNew2;
              ˜˜˜˜˜˜˜˜˜ ^
./UpdateMultiplicativePositive.h:252:42: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          if (variable2[i] != NULL) *(variable2[i]) = valueNew2;
                                      ˜˜˜˜˜˜˜˜˜ ^
In file included from diffExpressed_main.cpp:43:
./UpdateSigma2MH.h:46:69: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        up.push_back(new UpdateMultiplicativePositive(&model,&(str->sigma2[q][g]),epsilon));
                                                               ˜˜˜         ^
./UpdateSigma2MH.h:46:72: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        up.push_back(new UpdateMultiplicativePositive(&model,&(str->sigma2[q][g]),epsilon));
                                                               ˜˜˜            ^
./UpdateSigma2MH.h:50:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          delete term[i];
                 ˜˜˜˜ ^
./UpdateSigma2MH.h:62:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    delete up[i];
           ˜˜ ^
./UpdateSigma2MH.h:72:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    up[i]->setEpsilon(epsilon);
    ˜˜ ^
./UpdateSigma2MH.h:99:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      int acc = up[i]->update(ran);
                ˜˜ ^
In file included from diffExpressed_main.cpp:44:
./UpdateTMH.h:45:69: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      up.push_back(new UpdateMultiplicativePositive(&model,&(str->t[q]),epsilon));
                                                             ˜˜˜    ^
./UpdateTMH.h:49:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        delete term[i];
               ˜˜˜˜ ^
./UpdateTMH.h:61:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    delete up[i];
           ˜˜ ^
./UpdateTMH.h:87:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      int acc = up[i]->update(ran);
                ˜˜ ^
In file included from diffExpressed_main.cpp:45:
./UpdateLMH.h:46:69: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      up.push_back(new UpdateMultiplicativePositive(&model,&(str->l[q]),epsilon));
                                                             ˜˜˜    ^
./UpdateLMH.h:50:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        delete term[i];
               ˜˜˜˜ ^
./UpdateLMH.h:62:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    delete up[i];
           ˜˜ ^
./UpdateLMH.h:74:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    up[i]->setEpsilon(epsilon);
    ˜˜ ^
./UpdateLMH.h:102:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      int acc = up[i]->update(ran);
                ˜˜ ^
In file included from diffExpressed_main.cpp:46:
./UpdatePhiMH.h:42:66: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        up.push_back(new UpdateMultiplicativePositive(&model,&(str->phi[q][g]),epsilon));
                                                               ˜˜˜      ^
./UpdatePhiMH.h:42:69: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        up.push_back(new UpdateMultiplicativePositive(&model,&(str->phi[q][g]),epsilon));
                                                               ˜˜˜         ^
./UpdatePhiMH.h:46:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          delete term[i];
                 ˜˜˜˜ ^
./UpdatePhiMH.h:58:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    delete up[i];
           ˜˜ ^
./UpdatePhiMH.h:70:8: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    up[i]->setEpsilon(epsilon);
    ˜˜ ^
./UpdatePhiMH.h:99:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      int acc = up[i]->update(ran);
                ˜˜ ^
In file included from diffExpressed_main.cpp:47:
./UpdateThetaMH.h:46:73: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      up.push_back(new UpdateMultiplicativePositive(&model,&(str->theta[q]),epsilon));
                                                             ˜˜˜        ^
./UpdateThetaMH.h:50:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        delete term[i];
               ˜˜˜˜ ^
./UpdateThetaMH.h:62:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    delete up[i];
           ˜˜ ^
./UpdateThetaMH.h:88:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      int acc = up[i]->update(ran);
                ˜˜ ^
In file included from diffExpressed_main.cpp:48:
./UpdateLambdaMH.h:44:74: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      up.push_back(new UpdateMultiplicativePositive(&model,&(str->lambda[q]),epsilon));
                                                             ˜˜˜         ^
./UpdateLambdaMH.h:48:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        delete term[i];
               ˜˜˜˜ ^
./UpdateLambdaMH.h:60:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    delete up[i];
           ˜˜ ^
./UpdateLambdaMH.h:86:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      int acc = up[i]->update(ran);
                ˜˜ ^
In file included from diffExpressed_main.cpp:49:
./UpdateTau2RDDeltaMH.h:66:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      vector<double> oldValues(str->Q);
                     ˜˜˜˜˜˜˜˜˜ ˜˜˜˜˜^
./UpdateTau2RDDeltaMH.h:67:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      vector<double> newValues(str->Q);
                     ˜˜˜˜˜˜˜˜˜ ˜˜˜˜˜^
./UpdateTau2RDDeltaMH.h:72:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          oldValues[i] = str->tau2R[i];
          ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:72:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          oldValues[i] = str->tau2R[i];
                         ˜˜˜        ^
./UpdateTau2RDDeltaMH.h:73:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newValues[i] = str->tau2R[i];
          ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:73:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newValues[i] = str->tau2R[i];
                         ˜˜˜        ^
./UpdateTau2RDDeltaMH.h:76:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newValues[q] *= u;
      ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:77:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newValues[p] /= u;
      ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:81:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        prod *= newValues[i];
                ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:85:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newValues[i] /= prod;
        ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:95:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newDDelta.resize(str->Q);
      ˜˜˜˜˜˜˜˜˜        ˜˜˜˜˜^
./UpdateTau2RDDeltaMH.h:96:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newDDeltaOldTau2.resize(str->Q);
      ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜        ˜˜˜˜˜^
./UpdateTau2RDDeltaMH.h:99:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newDDelta[q].resize(str->G);
          ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:99:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newDDelta[q].resize(str->G);
          ˜˜˜˜˜˜˜˜˜           ˜˜˜˜˜^
./UpdateTau2RDDeltaMH.h:100:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newDDeltaOldTau2[q].resize(str->G);
          ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:100:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newDDeltaOldTau2[q].resize(str->G);
          ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜           ˜˜˜˜˜^
./UpdateTau2RDDeltaMH.h:111:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          var.resize(str->Q);
          ˜˜˜        ˜˜˜˜˜^
./UpdateTau2RDDeltaMH.h:114:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            var[p].resize(str->Q);
            ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:114:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            var[p].resize(str->Q);
            ˜˜˜           ˜˜˜˜˜^
./UpdateTau2RDDeltaMH.h:117:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] = str->c2 * newValues[p];
              ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:117:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] = str->c2 * newValues[p];
              ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:117:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] = str->c2 * newValues[p];
                                    ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:118:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
              ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:118:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
              ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:118:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
                               ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:118:53: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
                                               ˜˜˜         ^
./UpdateTau2RDDeltaMH.h:118:56: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
                                               ˜˜˜            ^
./UpdateTau2RDDeltaMH.h:124:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] = str->c2;
                ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:124:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] = str->c2;
                ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:125:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->r[p][q];
                ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:125:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->r[p][q];
                ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:125:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->r[p][q];
                             ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:125:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->r[p][q];
                             ˜˜˜       ^
./UpdateTau2RDDeltaMH.h:126:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(newValues[p] * newValues[q]);
                ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:126:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(newValues[p] * newValues[q]);
                ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:126:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(newValues[p] * newValues[q]);
                                  ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:126:46: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(newValues[p] * newValues[q]);
                                                 ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:127:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:127:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:127:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                        ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:127:55: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                        ˜˜˜         ^
./UpdateTau2RDDeltaMH.h:127:58: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                        ˜˜˜            ^
./UpdateTau2RDDeltaMH.h:127:71: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                             ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:127:92: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                                             ˜˜˜         ^
./UpdateTau2RDDeltaMH.h:127:95: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                                             ˜˜˜            ^
./UpdateTau2RDDeltaMH.h:129:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:129:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:129:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                            ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:129:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                            ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:136:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vector<double> Mean(str->Q);
                         ˜˜˜˜ ˜˜˜˜˜^
./UpdateTau2RDDeltaMH.h:137:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          for (p = 0; p < str->Q; p++) Mean[p] = 0.0;
                                       ˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:143:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vector<double> mean(str->Q);
                         ˜˜˜˜ ˜˜˜˜˜^
./UpdateTau2RDDeltaMH.h:144:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          for (p = 0; p < str->Q; p++) mean[p] = 0.0;
                                       ˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:149:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              if (str->delta[q][g] == 1)
                  ˜˜˜        ^
./UpdateTau2RDDeltaMH.h:149:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              if (str->delta[q][g] == 1)
                  ˜˜˜           ^
./UpdateTau2RDDeltaMH.h:160:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          lin.resize(str->Q);
          ˜˜˜        ˜˜˜˜˜^
./UpdateTau2RDDeltaMH.h:161:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          quad.resize(str->Q);
          ˜˜˜˜        ˜˜˜˜˜^
./UpdateTau2RDDeltaMH.h:164:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              lin[q] = 0.0;
              ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:165:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              quad[q] = 0.0;
              ˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:171:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  if (str->delta[q][g] == 1)
                      ˜˜˜        ^
./UpdateTau2RDDeltaMH.h:171:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  if (str->delta[q][g] == 1)
                      ˜˜˜           ^
./UpdateTau2RDDeltaMH.h:173:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      double var0 = str->sigma2[q][g] * str->phi[q][g];
                                    ˜˜˜         ^
./UpdateTau2RDDeltaMH.h:173:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      double var0 = str->sigma2[q][g] * str->phi[q][g];
                                    ˜˜˜            ^
./UpdateTau2RDDeltaMH.h:173:52: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      double var0 = str->sigma2[q][g] * str->phi[q][g];
                                                        ˜˜˜      ^
./UpdateTau2RDDeltaMH.h:173:55: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      double var0 = str->sigma2[q][g] * str->phi[q][g];
                                                        ˜˜˜         ^
./UpdateTau2RDDeltaMH.h:174:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      double var1 = str->sigma2[q][g] / str->phi[q][g];
                                    ˜˜˜         ^
./UpdateTau2RDDeltaMH.h:174:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      double var1 = str->sigma2[q][g] / str->phi[q][g];
                                    ˜˜˜            ^
./UpdateTau2RDDeltaMH.h:174:52: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      double var1 = str->sigma2[q][g] / str->phi[q][g];
                                                        ˜˜˜      ^
./UpdateTau2RDDeltaMH.h:174:55: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      double var1 = str->sigma2[q][g] / str->phi[q][g];
                                                        ˜˜˜         ^
./UpdateTau2RDDeltaMH.h:176:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                      for (s = 0; s < str->S[q]; s++)
                                      ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:178:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                          double variance = str->psi[q][s] == 0 ? var0 : var1;
                                            ˜˜˜      ^
./UpdateTau2RDDeltaMH.h:178:36: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                          double variance = str->psi[q][s] == 0 ? var0 : var1;
                                            ˜˜˜         ^
./UpdateTau2RDDeltaMH.h:179:11: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                          quad[q] += 1.0 / variance;
                          ˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:180:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                          lin[q] += (2.0 * str->psi[q][s] - 1.0) * 
                          ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:180:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                          lin[q] += (2.0 * str->psi[q][s] - 1.0) * 
                                           ˜˜˜      ^
./UpdateTau2RDDeltaMH.h:180:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                          lin[q] += (2.0 * str->psi[q][s] - 1.0) * 
                                           ˜˜˜         ^
./UpdateTau2RDDeltaMH.h:181:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                            (str->x[q][g][s] - str->nu[q][g]) / variance;
                             ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:181:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                            (str->x[q][g][s] - str->nu[q][g]) / variance;
                             ˜˜˜       ^
./UpdateTau2RDDeltaMH.h:181:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                            (str->x[q][g][s] - str->nu[q][g]) / variance;
                             ˜˜˜          ^
./UpdateTau2RDDeltaMH.h:181:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                            (str->x[q][g][s] - str->nu[q][g]) / variance;
                                               ˜˜˜     ^
./UpdateTau2RDDeltaMH.h:181:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                            (str->x[q][g][s] - str->nu[q][g]) / variance;
                                               ˜˜˜        ^
./UpdateTau2RDDeltaMH.h:196:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  Mean[q] += lin[q];
                  ˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:196:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  Mean[q] += lin[q];
                             ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:197:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  varInv[q][q] += quad[q];
                  ˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:197:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  varInv[q][q] += quad[q];
                  ˜˜˜˜˜˜    ^
./UpdateTau2RDDeltaMH.h:197:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  varInv[q][q] += quad[q];
                                  ˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:208:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vector<double> vv(str->Q);
                         ˜˜ ˜˜˜˜˜^
./UpdateTau2RDDeltaMH.h:211:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            newDDelta[q][g] = vv[q];
            ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:211:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            newDDelta[q][g] = vv[q];
            ˜˜˜˜˜˜˜˜˜    ^
./UpdateTau2RDDeltaMH.h:211:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            newDDelta[q][g] = vv[q];
                              ˜˜ ^
./UpdateTau2RDDeltaMH.h:226:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] = str->c2 * oldValues[p];
              ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:226:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] = str->c2 * oldValues[p];
              ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:226:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] = str->c2 * oldValues[p];
                                    ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:227:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
              ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:227:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
              ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:227:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
                               ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:227:53: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
                                               ˜˜˜         ^
./UpdateTau2RDDeltaMH.h:227:56: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->b[p] * log(str->sigma2[p][g]));
                                               ˜˜˜            ^
./UpdateTau2RDDeltaMH.h:233:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] = str->c2;
                ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:233:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] = str->c2;
                ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:234:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->r[p][q];
                ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:234:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->r[p][q];
                ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:234:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->r[p][q];
                             ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:234:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->r[p][q];
                             ˜˜˜       ^
./UpdateTau2RDDeltaMH.h:235:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(oldValues[p] * oldValues[q]);
                ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:235:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(oldValues[p] * oldValues[q]);
                ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:235:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(oldValues[p] * oldValues[q]);
                                  ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:235:46: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(oldValues[p] * oldValues[q]);
                                                 ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:236:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:236:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:236:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                        ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:236:55: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                        ˜˜˜         ^
./UpdateTau2RDDeltaMH.h:236:58: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                        ˜˜˜            ^
./UpdateTau2RDDeltaMH.h:236:71: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                             ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:236:92: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                                             ˜˜˜         ^
./UpdateTau2RDDeltaMH.h:236:95: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->b[q] * log(str->sigma2[q][g]) + str->b[p] * log(str->sigma2[p][g])));
                                                                                             ˜˜˜            ^
./UpdateTau2RDDeltaMH.h:238:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:238:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:238:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                            ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:238:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                            ˜˜˜    ^
./UpdateTau2RDDeltaMH.h:245:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          for (p = 0; p < str->Q; p++) Mean[p] = 0.0;
                                       ˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:251:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          for (p = 0; p < str->Q; p++) mean[p] = 0.0;
                                       ˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:259:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  Mean[q] += lin[q];
                  ˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:259:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  Mean[q] += lin[q];
                             ˜˜˜ ^
./UpdateTau2RDDeltaMH.h:260:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  varInv[q][q] += quad[q];
                  ˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:260:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  varInv[q][q] += quad[q];
                  ˜˜˜˜˜˜    ^
./UpdateTau2RDDeltaMH.h:260:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  varInv[q][q] += quad[q];
                                  ˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:269:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            newDDeltaOldTau2[q][g] = vv[q];
            ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:269:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            newDDeltaOldTau2[q][g] = vv[q];
            ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
./UpdateTau2RDDeltaMH.h:269:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            newDDeltaOldTau2[q][g] = vv[q];
                                     ˜˜ ^
./UpdateTau2RDDeltaMH.h:278:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        str->tau2R[i] = newValues[i];
        ˜˜˜        ^
./UpdateTau2RDDeltaMH.h:278:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        str->tau2R[i] = newValues[i];
                        ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:283:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        str->tau2R[i] = oldValues[i];
        ˜˜˜        ^
./UpdateTau2RDDeltaMH.h:283:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        str->tau2R[i] = oldValues[i];
                        ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:292:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->tau2R[i] = newValues[i];
            ˜˜˜        ^
./UpdateTau2RDDeltaMH.h:292:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->tau2R[i] = newValues[i];
                            ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:295:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->Delta[q][g] = newDDelta[q][g];
              ˜˜˜        ^
./UpdateTau2RDDeltaMH.h:295:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->Delta[q][g] = newDDelta[q][g];
              ˜˜˜           ^
./UpdateTau2RDDeltaMH.h:295:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->Delta[q][g] = newDDelta[q][g];
                                 ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:295:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->Delta[q][g] = newDDelta[q][g];
                                 ˜˜˜˜˜˜˜˜˜    ^
./UpdateTau2RDDeltaMH.h:303:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->Delta[q][g] = newDDeltaOldTau2[q][g];
              ˜˜˜        ^
./UpdateTau2RDDeltaMH.h:303:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->Delta[q][g] = newDDeltaOldTau2[q][g];
              ˜˜˜           ^
./UpdateTau2RDDeltaMH.h:303:44: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->Delta[q][g] = newDDeltaOldTau2[q][g];
                                 ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RDDeltaMH.h:303:47: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->Delta[q][g] = newDDeltaOldTau2[q][g];
                                 ˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜    ^
In file included from diffExpressed_main.cpp:50:
./UpdateTau2RhoNuMH.h:66:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      vector<double> oldValues(str->Q);
                     ˜˜˜˜˜˜˜˜˜ ˜˜˜˜˜^
./UpdateTau2RhoNuMH.h:67:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      vector<double> newValues(str->Q);
                     ˜˜˜˜˜˜˜˜˜ ˜˜˜˜˜^
./UpdateTau2RhoNuMH.h:72:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          oldValues[i] = str->tau2Rho[i];
          ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:72:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          oldValues[i] = str->tau2Rho[i];
                         ˜˜˜          ^
./UpdateTau2RhoNuMH.h:73:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newValues[i] = str->tau2Rho[i];
          ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:73:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newValues[i] = str->tau2Rho[i];
                         ˜˜˜          ^
./UpdateTau2RhoNuMH.h:76:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newValues[q] *= u;
      ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:77:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newValues[p] /= u;
      ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:81:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        prod *= newValues[i];
                ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:85:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newValues[i] /= prod;
        ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:95:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newNu.resize(str->Q);
      ˜˜˜˜˜        ˜˜˜˜˜^
./UpdateTau2RhoNuMH.h:96:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newNuOldTau2.resize(str->Q);
      ˜˜˜˜˜˜˜˜˜˜˜˜        ˜˜˜˜˜^
./UpdateTau2RhoNuMH.h:99:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newNu[q].resize(str->G);
          ˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:99:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newNu[q].resize(str->G);
          ˜˜˜˜˜           ˜˜˜˜˜^
./UpdateTau2RhoNuMH.h:100:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newNuOldTau2[q].resize(str->G);
          ˜˜˜˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:100:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newNuOldTau2[q].resize(str->G);
          ˜˜˜˜˜˜˜˜˜˜˜˜           ˜˜˜˜˜^
./UpdateTau2RhoNuMH.h:111:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          var.resize(str->Q);
          ˜˜˜        ˜˜˜˜˜^
./UpdateTau2RhoNuMH.h:114:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            var[p].resize(str->Q);
            ˜˜˜ ^
./UpdateTau2RhoNuMH.h:114:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            var[p].resize(str->Q);
            ˜˜˜           ˜˜˜˜˜^
./UpdateTau2RhoNuMH.h:118:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] = str->gamma2 * newValues[p];
              ˜˜˜ ^
./UpdateTau2RhoNuMH.h:118:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] = str->gamma2 * newValues[p];
              ˜˜˜    ^
./UpdateTau2RhoNuMH.h:118:44: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] = str->gamma2 * newValues[p];
                                        ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:119:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->a[p] * log(str->sigma2[p][g]));
              ˜˜˜ ^
./UpdateTau2RhoNuMH.h:119:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->a[p] * log(str->sigma2[p][g]));
              ˜˜˜    ^
./UpdateTau2RhoNuMH.h:119:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->a[p] * log(str->sigma2[p][g]));
                               ˜˜˜    ^
./UpdateTau2RhoNuMH.h:119:53: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->a[p] * log(str->sigma2[p][g]));
                                               ˜˜˜         ^
./UpdateTau2RhoNuMH.h:119:56: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->a[p] * log(str->sigma2[p][g]));
                                               ˜˜˜            ^
./UpdateTau2RhoNuMH.h:125:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] = str->gamma2;
                ˜˜˜ ^
./UpdateTau2RhoNuMH.h:125:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] = str->gamma2;
                ˜˜˜    ^
./UpdateTau2RhoNuMH.h:126:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->rho[p][q];
                ˜˜˜ ^
./UpdateTau2RhoNuMH.h:126:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->rho[p][q];
                ˜˜˜    ^
./UpdateTau2RhoNuMH.h:126:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->rho[p][q];
                             ˜˜˜      ^
./UpdateTau2RhoNuMH.h:126:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->rho[p][q];
                             ˜˜˜         ^
./UpdateTau2RhoNuMH.h:127:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(newValues[p] * newValues[q]);
                ˜˜˜ ^
./UpdateTau2RhoNuMH.h:127:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(newValues[p] * newValues[q]);
                ˜˜˜    ^
./UpdateTau2RhoNuMH.h:127:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(newValues[p] * newValues[q]);
                                  ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:127:46: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(newValues[p] * newValues[q]);
                                                 ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:128:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                ˜˜˜ ^
./UpdateTau2RhoNuMH.h:128:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                ˜˜˜    ^
./UpdateTau2RhoNuMH.h:128:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                        ˜˜˜    ^
./UpdateTau2RhoNuMH.h:128:55: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                        ˜˜˜         ^
./UpdateTau2RhoNuMH.h:128:58: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                        ˜˜˜            ^
./UpdateTau2RhoNuMH.h:128:71: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                                             ˜˜˜    ^
./UpdateTau2RhoNuMH.h:128:92: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                                                             ˜˜˜         ^
./UpdateTau2RhoNuMH.h:128:95: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                                                             ˜˜˜            ^
./UpdateTau2RhoNuMH.h:130:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                ˜˜˜ ^
./UpdateTau2RhoNuMH.h:130:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                ˜˜˜    ^
./UpdateTau2RhoNuMH.h:130:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                            ˜˜˜ ^
./UpdateTau2RhoNuMH.h:130:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                            ˜˜˜    ^
./UpdateTau2RhoNuMH.h:137:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vector<double> Mean(str->Q);
                         ˜˜˜˜ ˜˜˜˜˜^
./UpdateTau2RhoNuMH.h:138:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          for (p = 0; p < str->Q; p++) Mean[p] = 0.0;
                                       ˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:146:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          lin.resize(str->Q);
          ˜˜˜        ˜˜˜˜˜^
./UpdateTau2RhoNuMH.h:147:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          quad.resize(str->Q);
          ˜˜˜˜        ˜˜˜˜˜^
./UpdateTau2RhoNuMH.h:151:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              double var0 = str->sigma2[q][g] * str->phi[q][g];
                            ˜˜˜         ^
./UpdateTau2RhoNuMH.h:151:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              double var0 = str->sigma2[q][g] * str->phi[q][g];
                            ˜˜˜            ^
./UpdateTau2RhoNuMH.h:151:51: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              double var0 = str->sigma2[q][g] * str->phi[q][g];
                                                ˜˜˜      ^
./UpdateTau2RhoNuMH.h:151:54: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              double var0 = str->sigma2[q][g] * str->phi[q][g];
                                                ˜˜˜         ^
./UpdateTau2RhoNuMH.h:152:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              double var1 = str->sigma2[q][g] / str->phi[q][g];
                            ˜˜˜         ^
./UpdateTau2RhoNuMH.h:152:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              double var1 = str->sigma2[q][g] / str->phi[q][g];
                            ˜˜˜            ^
./UpdateTau2RhoNuMH.h:152:51: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              double var1 = str->sigma2[q][g] / str->phi[q][g];
                                                ˜˜˜      ^
./UpdateTau2RhoNuMH.h:152:54: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              double var1 = str->sigma2[q][g] / str->phi[q][g];
                                                ˜˜˜         ^
./UpdateTau2RhoNuMH.h:153:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              for (s = 0; s < str->S[q]; s++)
                              ˜˜˜    ^
./UpdateTau2RhoNuMH.h:155:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  double variance = str->psi[q][s] == 0 ? var0 : var1;
                                    ˜˜˜      ^
./UpdateTau2RhoNuMH.h:155:35: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  double variance = str->psi[q][s] == 0 ? var0 : var1;
                                    ˜˜˜         ^
./UpdateTau2RhoNuMH.h:156:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  quad[q] += 1.0 / variance;
                  ˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:157:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  lin[q] += (str->x[q][g][s] - str->delta[q][g] * (2.0 * str->psi[q][s] - 1.0) * 
                  ˜˜˜ ^
./UpdateTau2RhoNuMH.h:157:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  lin[q] += (str->x[q][g][s] - str->delta[q][g] * (2.0 * str->psi[q][s] - 1.0) * 
                             ˜˜˜    ^
./UpdateTau2RhoNuMH.h:157:26: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  lin[q] += (str->x[q][g][s] - str->delta[q][g] * (2.0 * str->psi[q][s] - 1.0) * 
                             ˜˜˜       ^
./UpdateTau2RhoNuMH.h:157:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  lin[q] += (str->x[q][g][s] - str->delta[q][g] * (2.0 * str->psi[q][s] - 1.0) * 
                             ˜˜˜          ^
./UpdateTau2RhoNuMH.h:157:45: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  lin[q] += (str->x[q][g][s] - str->delta[q][g] * (2.0 * str->psi[q][s] - 1.0) * 
                                               ˜˜˜        ^
./UpdateTau2RhoNuMH.h:157:48: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  lin[q] += (str->x[q][g][s] - str->delta[q][g] * (2.0 * str->psi[q][s] - 1.0) * 
                                               ˜˜˜           ^
./UpdateTau2RhoNuMH.h:157:69: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  lin[q] += (str->x[q][g][s] - str->delta[q][g] * (2.0 * str->psi[q][s] - 1.0) * 
                                                                         ˜˜˜      ^
./UpdateTau2RhoNuMH.h:157:72: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                  lin[q] += (str->x[q][g][s] - str->delta[q][g] * (2.0 * str->psi[q][s] - 1.0) * 
                                                                         ˜˜˜         ^
./UpdateTau2RhoNuMH.h:158:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                             str->Delta[q][g]) / variance;
                             ˜˜˜        ^
./UpdateTau2RhoNuMH.h:158:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                             str->Delta[q][g]) / variance;
                             ˜˜˜           ^
./UpdateTau2RhoNuMH.h:172:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              varInv[q][q] += quad[q];
              ˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:172:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              varInv[q][q] += quad[q];
              ˜˜˜˜˜˜    ^
./UpdateTau2RhoNuMH.h:172:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              varInv[q][q] += quad[q];
                              ˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:173:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              Mean[q] += lin[q];
              ˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:173:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              Mean[q] += lin[q];
                         ˜˜˜ ^
./UpdateTau2RhoNuMH.h:184:27: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          vector<double> vv(str->Q);
                         ˜˜ ˜˜˜˜˜^
./UpdateTau2RhoNuMH.h:187:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            newNu[q][g] = vv[q];
            ˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:187:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            newNu[q][g] = vv[q];
            ˜˜˜˜˜    ^
./UpdateTau2RhoNuMH.h:187:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            newNu[q][g] = vv[q];
                          ˜˜ ^
./UpdateTau2RhoNuMH.h:202:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] = str->gamma2 * oldValues[p];
              ˜˜˜ ^
./UpdateTau2RhoNuMH.h:202:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] = str->gamma2 * oldValues[p];
              ˜˜˜    ^
./UpdateTau2RhoNuMH.h:202:44: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] = str->gamma2 * oldValues[p];
                                        ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:203:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->a[p] * log(str->sigma2[p][g]));
              ˜˜˜ ^
./UpdateTau2RhoNuMH.h:203:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->a[p] * log(str->sigma2[p][g]));
              ˜˜˜    ^
./UpdateTau2RhoNuMH.h:203:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->a[p] * log(str->sigma2[p][g]));
                               ˜˜˜    ^
./UpdateTau2RhoNuMH.h:203:53: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->a[p] * log(str->sigma2[p][g]));
                                               ˜˜˜         ^
./UpdateTau2RhoNuMH.h:203:56: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              var[p][p] *= exp(str->a[p] * log(str->sigma2[p][g]));
                                               ˜˜˜            ^
./UpdateTau2RhoNuMH.h:209:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] = str->gamma2;
                ˜˜˜ ^
./UpdateTau2RhoNuMH.h:209:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] = str->gamma2;
                ˜˜˜    ^
./UpdateTau2RhoNuMH.h:210:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->rho[p][q];
                ˜˜˜ ^
./UpdateTau2RhoNuMH.h:210:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->rho[p][q];
                ˜˜˜    ^
./UpdateTau2RhoNuMH.h:210:25: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->rho[p][q];
                             ˜˜˜      ^
./UpdateTau2RhoNuMH.h:210:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= str->rho[p][q];
                             ˜˜˜         ^
./UpdateTau2RhoNuMH.h:211:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(oldValues[p] * oldValues[q]);
                ˜˜˜ ^
./UpdateTau2RhoNuMH.h:211:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(oldValues[p] * oldValues[q]);
                ˜˜˜    ^
./UpdateTau2RhoNuMH.h:211:31: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(oldValues[p] * oldValues[q]);
                                  ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:211:46: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= sqrt(oldValues[p] * oldValues[q]);
                                                 ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:212:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                ˜˜˜ ^
./UpdateTau2RhoNuMH.h:212:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                ˜˜˜    ^
./UpdateTau2RhoNuMH.h:212:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                        ˜˜˜    ^
./UpdateTau2RhoNuMH.h:212:55: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                        ˜˜˜         ^
./UpdateTau2RhoNuMH.h:212:58: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                        ˜˜˜            ^
./UpdateTau2RhoNuMH.h:212:71: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                                             ˜˜˜    ^
./UpdateTau2RhoNuMH.h:212:92: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                                                             ˜˜˜         ^
./UpdateTau2RhoNuMH.h:212:95: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[p][q] *= exp(0.5 * (str->a[q] * log(str->sigma2[q][g]) + str->a[p] * log(str->sigma2[p][g])));
                                                                                             ˜˜˜            ^
./UpdateTau2RhoNuMH.h:214:7: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                ˜˜˜ ^
./UpdateTau2RhoNuMH.h:214:10: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                ˜˜˜    ^
./UpdateTau2RhoNuMH.h:214:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                            ˜˜˜ ^
./UpdateTau2RhoNuMH.h:214:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
                var[q][p] = var[p][q];
                            ˜˜˜    ^
./UpdateTau2RhoNuMH.h:221:38: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          for (p = 0; p < str->Q; p++) Mean[p] = 0.0;
                                       ˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:231:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              varInv[q][q] += quad[q];
              ˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:231:18: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              varInv[q][q] += quad[q];
              ˜˜˜˜˜˜    ^
./UpdateTau2RhoNuMH.h:231:29: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              varInv[q][q] += quad[q];
                              ˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:232:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              Mean[q] += lin[q];
              ˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:232:23: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              Mean[q] += lin[q];
                         ˜˜˜ ^
./UpdateTau2RhoNuMH.h:240:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            newNuOldTau2[q][g] = vv[q];
            ˜˜˜˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:240:22: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            newNuOldTau2[q][g] = vv[q];
            ˜˜˜˜˜˜˜˜˜˜˜˜    ^
./UpdateTau2RhoNuMH.h:240:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            newNuOldTau2[q][g] = vv[q];
                                 ˜˜ ^
./UpdateTau2RhoNuMH.h:249:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        str->tau2Rho[i] = newValues[i];
        ˜˜˜          ^
./UpdateTau2RhoNuMH.h:249:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        str->tau2Rho[i] = newValues[i];
                          ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:254:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        str->tau2Rho[i] = oldValues[i];
        ˜˜˜          ^
./UpdateTau2RhoNuMH.h:254:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        str->tau2Rho[i] = oldValues[i];
                          ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:263:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->tau2Rho[i] = newValues[i];
            ˜˜˜          ^
./UpdateTau2RhoNuMH.h:263:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->tau2Rho[i] = newValues[i];
                              ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:266:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->nu[q][g] = newNu[q][g];
              ˜˜˜     ^
./UpdateTau2RhoNuMH.h:266:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->nu[q][g] = newNu[q][g];
              ˜˜˜        ^
./UpdateTau2RhoNuMH.h:266:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->nu[q][g] = newNu[q][g];
                              ˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:266:33: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->nu[q][g] = newNu[q][g];
                              ˜˜˜˜˜    ^
./UpdateTau2RhoNuMH.h:274:16: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->nu[q][g] = newNuOldTau2[q][g];
              ˜˜˜     ^
./UpdateTau2RhoNuMH.h:274:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->nu[q][g] = newNuOldTau2[q][g];
              ˜˜˜        ^
./UpdateTau2RhoNuMH.h:274:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->nu[q][g] = newNuOldTau2[q][g];
                              ˜˜˜˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoNuMH.h:274:40: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              str->nu[q][g] = newNuOldTau2[q][g];
                              ˜˜˜˜˜˜˜˜˜˜˜˜    ^
In file included from diffExpressed_main.cpp:51:
./UpdateTau2RMH.h:66:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      vector<double> oldValues(str->Q);
                     ˜˜˜˜˜˜˜˜˜ ˜˜˜˜˜^
./UpdateTau2RMH.h:67:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      vector<double> newValues(str->Q);
                     ˜˜˜˜˜˜˜˜˜ ˜˜˜˜˜^
./UpdateTau2RMH.h:72:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          oldValues[i] = str->tau2R[i];
          ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RMH.h:72:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          oldValues[i] = str->tau2R[i];
                         ˜˜˜        ^
./UpdateTau2RMH.h:73:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newValues[i] = str->tau2R[i];
          ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RMH.h:73:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newValues[i] = str->tau2R[i];
                         ˜˜˜        ^
./UpdateTau2RMH.h:76:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newValues[q] *= u;
      ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RMH.h:77:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newValues[p] /= u;
      ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RMH.h:81:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        prod *= newValues[i];
                ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RMH.h:85:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newValues[i] /= prod;
        ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RMH.h:93:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        str->tau2R[i] = newValues[i];
        ˜˜˜        ^
./UpdateTau2RMH.h:93:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        str->tau2R[i] = newValues[i];
                        ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RMH.h:97:13: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        str->tau2R[i] = oldValues[i];
        ˜˜˜        ^
./UpdateTau2RMH.h:97:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        str->tau2R[i] = oldValues[i];
                        ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RMH.h:103:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->tau2R[i] = newValues[i];
            ˜˜˜        ^
./UpdateTau2RMH.h:103:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->tau2R[i] = newValues[i];
                            ˜˜˜˜˜˜˜˜˜ ^
In file included from diffExpressed_main.cpp:52:
./UpdateTau2RhoMH.h:66:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      vector<double> oldValues(str->Q);
                     ˜˜˜˜˜˜˜˜˜ ˜˜˜˜˜^
./UpdateTau2RhoMH.h:67:37: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      vector<double> newValues(str->Q);
                     ˜˜˜˜˜˜˜˜˜ ˜˜˜˜˜^
./UpdateTau2RhoMH.h:72:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          oldValues[i] = str->tau2Rho[i];
          ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoMH.h:72:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          oldValues[i] = str->tau2Rho[i];
                         ˜˜˜          ^
./UpdateTau2RhoMH.h:73:14: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newValues[i] = str->tau2Rho[i];
          ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoMH.h:73:32: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
          newValues[i] = str->tau2Rho[i];
                         ˜˜˜          ^
./UpdateTau2RhoMH.h:76:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newValues[q] *= u;
      ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoMH.h:77:17: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      newValues[p] /= u;
      ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoMH.h:81:20: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        prod *= newValues[i];
                ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoMH.h:85:12: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        newValues[i] /= prod;
        ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoMH.h:93:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        str->tau2Rho[i] = newValues[i];
        ˜˜˜          ^
./UpdateTau2RhoMH.h:93:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        str->tau2Rho[i] = newValues[i];
                          ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoMH.h:97:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        str->tau2Rho[i] = oldValues[i];
        ˜˜˜          ^
./UpdateTau2RhoMH.h:97:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
        str->tau2Rho[i] = oldValues[i];
                          ˜˜˜˜˜˜˜˜˜ ^
./UpdateTau2RhoMH.h:103:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->tau2Rho[i] = newValues[i];
            ˜˜˜          ^
./UpdateTau2RhoMH.h:103:34: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            str->tau2Rho[i] = newValues[i];
                              ˜˜˜˜˜˜˜˜˜ ^
In file included from diffExpressed_main.cpp:54:
./ReportDiffexpressed.h:38:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  nOn.resize(str->G);
  ˜˜˜        ˜˜˜˜˜^
./ReportDiffexpressed.h:41:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    nOn[g].resize(3);
    ˜˜˜ ^
./ReportDiffexpressed.h:54:19: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
  nOn.resize(str->G);
  ˜˜˜        ˜˜˜˜˜^
./ReportDiffexpressed.h:57:9: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
    nOn[g].resize(3);
    ˜˜˜ ^
In file included from diffExpressed_main.cpp:143:
./PotentialFunction.h:56:28: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
     potAll.push_back(term[i]);
                      ˜˜˜˜ ^
diffExpressed_main.cpp:205:30: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
            for (t = 0; t < nUpdate[k]; t++)
                            ˜˜˜˜˜˜˜ ^
diffExpressed_main.cpp:206:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              update[k]->update(ran);
              ˜˜˜˜˜˜ ^
diffExpressed_main.cpp:218:15: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
              report[k]->report(&str);
              ˜˜˜˜˜˜ ^
diffExpressed_main.cpp:225:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      delete report[i];
             ˜˜˜˜˜˜ ^
diffExpressed_main.cpp:228:21: warning: implicit conversion changes signedness: 'int' to 'size_type' (aka 'unsigned long') [-Wsign-conversion]
      delete update[i];
             ˜˜˜˜˜˜ ^
1160 warnings generated.
clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -L/usr/local/lib -o XDE.so Cholesky.o Matrix_v2.o Potential_v2.o Random_v2.o Rinterface_v2.o Structure.o Update_v2.o Utility_v2.o diffExpressed_main.o -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.12-bioc/meat/XDE.Rcheck/XDE/libs
** R
** data
** inst
** preparing package for lazy loading
Creating a generic function for 'pairs' from package 'graphics' in package 'XDE'
Creating a generic function for 'plot' from package 'graphics' in package 'XDE'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (XDE)

name	user	system	elapsed
ExpressionSetList-class	0.064	0.012	0.075
Parameters-class	0.007	0.003	0.010
XdeMcmc-class	0.014	0.003	0.017
XdeParameter-class	0.021	0.001	0.022
burnin	0.010	0.004	0.013
empiricalStart	0.430	0.027	0.470
expressionSetList	0.033	0.005	0.038
firstMcmc	0.333	0.011	0.343
geneCenter	0.116	0.010	0.127
hyperparameters	0.312	0.011	0.324
lastMcmc	0.014	0.002	0.016
output	0.142	0.015	0.157
ssStatistic	1.591	0.052	1.642
studyCenter	0.116	0.009	0.124
symbolsInteresting	0.567	0.020	0.587
xde	0.013	0.001	0.015
xmcmc	0.428	0.017	0.445
xsScores	0.074	0.008	0.082