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BioC 2.12: BUILD BIN report for SamSPECTRAL on moscato2

This page was generated on 2013-10-09 09:38:46 -0700 (Wed, 09 Oct 2013).

Package 582/671HostnameOS / ArchBUILDCHECKBUILD BIN
SamSPECTRAL 1.14.1
Habil Zare
Snapshot Date: 2013-10-08 17:00:48 -0700 (Tue, 08 Oct 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_12/madman/Rpacks/SamSPECTRAL
Last Changed Rev: 75509 / Revision: 81334
Last Changed Date: 2013-04-10 10:14:28 -0700 (Wed, 10 Apr 2013)
george2 Linux (Ubuntu 12.04.1 LTS) / x86_64  OK  OK 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK [ OK ]
petty Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK 

Summary

Package: SamSPECTRAL
Version: 1.14.1
Command: rm -rf SamSPECTRAL.buildbin-libdir && mkdir SamSPECTRAL.buildbin-libdir && E:\biocbld\bbs-2.12-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=SamSPECTRAL.buildbin-libdir SamSPECTRAL_1.14.1.tar.gz
StartedAt: 2013-10-09 05:27:53 -0700 (Wed, 09 Oct 2013)
EndedAt: 2013-10-09 05:28:42 -0700 (Wed, 09 Oct 2013)
EllapsedTime: 49.4 seconds
RetCode: 0
Status:  OK  
PackageFile: SamSPECTRAL_1.14.1.zip
PackageFileSize: 776.2 KiB

Command output


install for i386

* installing *source* package 'SamSPECTRAL' ...
** libs
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c Rinit.c -o Rinit.o
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c conductance_computation.c -o conductance_computation.o
conductance_computation.c: In function 'conductance_computation':
conductance_computation.c:155:17: warning: variable 'repres_ind' set but not used [-Wunused-but-set-variable]
conductance_computation.c:155:7: warning: variable 'density' set but not used [-Wunused-but-set-variable]
conductance_computation.c:153:31: warning: unused variable 'dj' [-Wunused-variable]
conductance_computation.c:153:27: warning: unused variable 'di' [-Wunused-variable]
conductance_computation.c:152:20: warning: unused variable 'memberLen' [-Wunused-variable]
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c maximum_of_rows.c -o maximum_of_rows.o
gcc -m32 -shared -s -static-libgcc -o SamSPECTRAL.dll tmp.def Rinit.o conductance_computation.o maximum_of_rows.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/i386 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LE:/biocbld/BBS-2˜1.12-/R/bin/i386 -lR
installing to E:/biocbld/bbs-2.12-bioc/meat/SamSPECTRAL.buildbin-libdir/SamSPECTRAL/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: ignoring .First.lib() for package 'SamSPECTRAL'

install for x64

* installing *source* package 'SamSPECTRAL' ...
** libs
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c Rinit.c -o Rinit.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c conductance_computation.c -o conductance_computation.o
conductance_computation.c: In function 'conductance_computation':
conductance_computation.c:155:17: warning: variable 'repres_ind' set but not used [-Wunused-but-set-variable]
conductance_computation.c:155:7: warning: variable 'density' set but not used [-Wunused-but-set-variable]
conductance_computation.c:153:31: warning: unused variable 'dj' [-Wunused-variable]
conductance_computation.c:153:27: warning: unused variable 'di' [-Wunused-variable]
conductance_computation.c:152:20: warning: unused variable 'memberLen' [-Wunused-variable]
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c maximum_of_rows.c -o maximum_of_rows.o
gcc -m64 -shared -s -static-libgcc -o SamSPECTRAL.dll tmp.def Rinit.o conductance_computation.o maximum_of_rows.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LE:/biocbld/BBS-2˜1.12-/R/bin/x64 -lR
installing to E:/biocbld/bbs-2.12-bioc/meat/SamSPECTRAL.buildbin-libdir/SamSPECTRAL/libs/x64
** testing if installed package can be loaded
Warning: ignoring .First.lib() for package 'SamSPECTRAL'
* MD5 sums
packaged installation of 'SamSPECTRAL' as SamSPECTRAL_1.14.1.zip
* DONE (SamSPECTRAL)