ADaCGH2 1.9.0
Ramon Diaz-Uriarte
| Snapshot Date: 2013-03-24 17:01:43 -0700 (Sun, 24 Mar 2013) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ADaCGH2 | | Last Changed Rev: 74736 / Revision: 74774 | | Last Changed Date: 2013-03-23 04:33:47 -0700 (Sat, 23 Mar 2013) |
| george2 | Linux (Ubuntu 12.04.1 LTS) / x86_64 | OK | OK | |
| moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | [ OK ] |
| petty | Mac OS X Leopard (10.5.8) / i386 | OK | WARNINGS | OK |
install for i386
* installing *source* package 'ADaCGH2' ...
** libs
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O3 -Wall -std=gnu99 -mtune=core2 -c r_haarseg.c -o r_haarseg.o
r_haarseg.c: In function 'ad_HaarConv':
r_haarseg.c:65:12: warning: unused variable 'totalNorm' [-Wunused-variable]
r_haarseg.c: In function 'ad_FindLocalPeaks':
r_haarseg.c:152:8: warning: "/*" within comment [-Wcomment]
r_haarseg.c:176:8: warning: "/*" within comment [-Wcomment]
r_haarseg.c:128:9: warning: unused variable 'j' [-Wunused-variable]
r_haarseg.c: In function 'ad_HaarConv':
r_haarseg.c:97:27: warning: 'highNonNormed' may be used uninitialized in this function [-Wuninitialized]
r_haarseg.c:96:26: warning: 'lowNonNormed' may be used uninitialized in this function [-Wuninitialized]
r_haarseg.c:99:27: warning: 'highWeightSum' may be used uninitialized in this function [-Wuninitialized]
r_haarseg.c:98:26: warning: 'lowWeightSum' may be used uninitialized in this function [-Wuninitialized]
gcc -m32 -shared -s -static-libgcc -o ADaCGH2.dll tmp.def r_haarseg.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/i386 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LE:/biocbld/BBS-2˜1.12-/R/bin/i386 -lR
installing to E:/biocbld/bbs-2.12-bioc/meat/ADaCGH2.buildbin-libdir/ADaCGH2/libs/i386
** R
** data
** inst
** preparing package for lazy loading
'.find.package' is deprecated.
Use 'find.package' instead.
See help("Deprecated")
'.find.package' is deprecated.
Use 'find.package' instead.
See help("Deprecated")
'.find.package' is deprecated.
Use 'find.package' instead.
See help("Deprecated")
Setting adacgh_changepoints to DNAcopy:::changepoints
Setting adacgh_trimmed.variance to DNAcopy:::trimmed.variance
** help
*** installing help indices
** building package indices
** installing vignettes
'ADaCGH2.Rnw' using 'latin1'
** testing if installed package can be loaded
'.find.package' is deprecated.
Use 'find.package' instead.
See help("Deprecated")
'.find.package' is deprecated.
Use 'find.package' instead.
See help("Deprecated")
'.find.package' is deprecated.
Use 'find.package' instead.
See help("Deprecated")
install for x64
* installing *source* package 'ADaCGH2' ...
** libs
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O2 -Wall -std=gnu99 -mtune=core2 -c r_haarseg.c -o r_haarseg.o
r_haarseg.c: In function 'ad_HaarConv':
r_haarseg.c:65:12: warning: unused variable 'totalNorm' [-Wunused-variable]
r_haarseg.c: In function 'ad_FindLocalPeaks':
r_haarseg.c:152:8: warning: "/*" within comment [-Wcomment]
r_haarseg.c:176:8: warning: "/*" within comment [-Wcomment]
r_haarseg.c:128:9: warning: unused variable 'j' [-Wunused-variable]
r_haarseg.c: In function 'ad_HaarConv':
r_haarseg.c:97:27: warning: 'highNonNormed' may be used uninitialized in this function [-Wuninitialized]
r_haarseg.c:96:26: warning: 'lowNonNormed' may be used uninitialized in this function [-Wuninitialized]
r_haarseg.c:99:27: warning: 'highWeightSum' may be used uninitialized in this function [-Wuninitialized]
r_haarseg.c:98:26: warning: 'lowWeightSum' may be used uninitialized in this function [-Wuninitialized]
gcc -m64 -shared -s -static-libgcc -o ADaCGH2.dll tmp.def r_haarseg.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LE:/biocbld/BBS-2˜1.12-/R/bin/x64 -lR
installing to E:/biocbld/bbs-2.12-bioc/meat/ADaCGH2.buildbin-libdir/ADaCGH2/libs/x64
** testing if installed package can be loaded
'.find.package' is deprecated.
Use 'find.package' instead.
See help("Deprecated")
'.find.package' is deprecated.
Use 'find.package' instead.
See help("Deprecated")
'.find.package' is deprecated.
Use 'find.package' instead.
See help("Deprecated")
* MD5 sums
packaged installation of 'ADaCGH2' as ADaCGH2_1.9.0.zip
* DONE (ADaCGH2)