Package: pcot2

Version: 1.5.1

Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD check pcot2_1.5.1.tar.gz

RetCode: 0

Time: 299.9 seconds

Status: OK

CheckDir: pcot2.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory '/extra/loc/biocbuild/bbs-2.1-bioc/meat/pcot2.Rcheck'
* using R version 2.6.0 Under development (unstable) (2007-08-06 r42439)
* checking for file 'pcot2/DESCRIPTION' ... OK
* this is package 'pcot2' version '1.5.1'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'pcot2' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating pcot2-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating pcot2-manual.tex ... OK
* checking pcot2-manual.tex ... OK

* Installing *source* package 'pcot2' ...
** R
** inst
** help
 >>> Building/Updating help pages for package 'pcot2'
     Formats: text html latex example 
  aveProbe                          text    html    latex   example
  corplot                           text    html    latex   example
  corplot2                          text    html    latex   example
  getImat                           text    html    latex   example
  pcot2-internal                    text    html    latex
  pcot2                             text    html    latex   example
** building package indices ...
* DONE (pcot2)